Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01583 Aquilegia oxysepala HOM05D005514 ORTHO05D006563 7.6e-197 690.6 440 100.0
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla HOM05D005514 ORTHO05D006563 2.9e-79 300.1 440 46.1
AUR62010955 Chenopodium quinoa HOM05D005514 ORTHO05D006563 8.4e-79 298.5 452 46.0
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 2.3e-76 290.4 441 46.0
EL10Ac8g18440 Beta vulgaris HOM05D005514 ORTHO05D006563 1.5e-75 287.7 451 44.3
MD02G1042900 Malus domestica HOM05D005514 ORTHO05D006563 7.3e-75 285.4 460 43.0
CiPaw.03G229100 Carya illinoinensis HOM05D005514 ORTHO05D006563 2.8e-74 283.5 458 43.2
Peaxi162Scf00031g00232 Petunia axillaris HOM05D005514 ORTHO05D006563 4.8e-74 282.7 431 44.8
Thecc.09G107100 Theobroma cacao HOM05D005514 ORTHO05D006563 4.8e-74 282.7 452 42.9
CAN.G148.5 Capsicum annuum HOM05D005514 ORTHO05D006563 6.9e-73 278.9 430 43.3
Phvul.004G165700 Phaseolus vulgaris HOM05D005514 ORTHO05D006563 2.0e-72 277.3 452 43.6
Actinidia32673 Actinidia chinensis HOM05D005514 ORTHO05D006563 5.8e-72 275.8 431 44.1
CiPaw.04G162600 Carya illinoinensis HOM05D005514 ORTHO05D006563 2.2e-71 273.9 463 42.5
Nitab4.5_0000010g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 2.2e-71 273.9 454 41.9
QL02p045925 Quercus lobata HOM05D005514 ORTHO05D006563 2.9e-71 273.5 505 41.0
Ca_25539_v3 Cicer arietinum L. HOM05D005514 ORTHO05D006563 1.1e-70 271.6 457 43.5
Nitab4.5_0000952g0010 Nicotiana tabacum HOM05D005514 ORTHO05D006563 1.9e-70 270.8 473 40.6
PSO782G4531 Papaver somniferum HOM05D005514 ORTHO05D006563 4.2e-70 269.6 437 43.2
Sabra06G0124000 Salix brachista HOM05D005514 ORTHO05D006563 5.4e-70 269.2 457 41.6
CANSAT02G0006 Cannabis sativa HOM05D005514 ORTHO05D006563 1.2e-69 268.1 449 42.5
Eucgr.C01267 Eucalyptus grandis HOM05D005514 ORTHO05D006563 2.1e-69 267.3 470 42.6
Gohir.D08G262600 Gossypium hirsutum HOM05D005514 ORTHO05D006563 1.0e-68 265.0 463 42.1
Duzib168G0165 Durio zibethinus HOM05D005514 ORTHO05D006563 5.1e-68 262.7 421 43.0
Nn2g11677 Nelumbo nucifera HOM05D005514 ORTHO05D006563 1.1e-67 261.5 454 42.5
Oeu002248.1 Olea europaea HOM05D005514 ORTHO05D006563 2.5e-67 260.4 491 40.1
PSO566G0157 Papaver somniferum HOM05D005514 ORTHO05D006563 6.2e-66 255.8 424 43.4
Glyma.09G192400 Glycine max HOM05D005514 ORTHO05D006563 3.1e-65 253.4 459 40.5
Atru.chr7.1371 Acer truncatum HOM05D005514 ORTHO05D006563 4.0e-65 253.1 477 42.1
vmacro06229 Vaccinium macrocarpon HOM05D005514 ORTHO05D006563 6.9e-65 252.3 288 55.9
Glyma.07G084500 Glycine max HOM05D005514 ORTHO05D006563 2.6e-64 250.4 429 41.7
RcHm_v2.0_Chr2g0089981 Rosa chinensis HOM05D005514 ORTHO05D006563 2.6e-64 250.4 459 42.3
Hund09218 Selenicereus undatus HOM05D005514 ORTHO05D006563 2.6e-64 250.4 447 41.4
Gorai.004G280600 Gossypium raimondii HOM05D005514 ORTHO05D006563 3.4e-64 250.0 463 40.8
CSS0000167 Camellia sinensis var. sinensis HOM05D005514 ORTHO05D006563 7.6e-64 248.8 499 41.3
AUR62021464 Chenopodium quinoa HOM05D005514 ORTHO05D006563 1.7e-63 247.7 453 40.6
Ciclev10008655m.g Citrus clementina HOM05D005514 ORTHO05D006563 4.2e-62 243.0 469 41.4
Gohir.A08G241800 Gossypium hirsutum HOM05D005514 ORTHO05D006563 4.2e-62 243.0 462 40.3
Dinv41624 Davidia involucrata HOM05D005514 ORTHO05D006563 5.4e-62 242.7 275 53.8
Medtr6g087890 Medicago truncatula HOM05D005514 ORTHO05D006563 1.6e-61 241.1 452 40.3
Duzib150G0489 Durio zibethinus HOM05D005514 ORTHO05D006563 2.1e-61 240.7 462 44.8
Psat1g044240 Pisum sativum HOM05D005514 ORTHO05D006563 2.1e-61 240.7 462 40.9
Cfa003235 Carpinus fangiana HOM05D005514 ORTHO05D006563 3.5e-61 240.0 283 54.1
HanXRQChr10g0318661 Helianthus annuus HOM05D005514 ORTHO05D006563 3.5e-61 240.0 472 41.5
Ah.07g205470 Amaranthus hybridus HOM05D005514 ORTHO05D006563 2.3e-60 237.3 449 41.6
Lalb_Chr22g0352701 Lupinus albus HOM05D005514 ORTHO05D006563 1.5e-59 234.6 454 40.5
Solyc05g018340.4 Solanum lycopersicum HOM05D005514 ORTHO05D006563 2.5e-59 233.8 442 39.1
Sopen05g015140 Solanum pennellii HOM05D005514 ORTHO05D006563 2.5e-59 233.8 442 39.1
VMungo0464G0467 Vigna mungo HOM05D005514 ORTHO05D006563 2.5e-59 233.8 278 54.3
TAR624G0612 Trochodendron aralioides HOM05D005514 ORTHO05D006563 7.4e-59 232.3 247 57.1
Actinidia07405 Actinidia chinensis HOM05D005514 ORTHO05D006563 1.3e-58 231.5 447 40.0
Prupe.7G234000 Prunus persica HOM05D005514 ORTHO05D006563 1.6e-58 231.1 278 53.2
Manes.03G023100 Manihot esculenta HOM05D005514 ORTHO05D006563 2.8e-58 230.3 280 51.8
TPR.G10049 Trifolium pratense HOM05D005514 ORTHO05D006563 2.8e-58 230.3 491 37.9
MSTRG.10624 Avicennia marina HOM05D005514 ORTHO05D006563 6.2e-58 229.2 447 40.0
Sc18g0001310 Simmondsia chinensis HOM05D005514 ORTHO05D006563 1.8e-57 227.6 452 39.8
Dinv36656 Davidia involucrata HOM05D005514 ORTHO05D006563 5.3e-57 226.1 277 52.0
MBI04_g19180_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 1.2e-56 224.9 295 50.2
MBI14_g08031_MAGBIO Magnolia biondii HOM05D005514 ORTHO05D006563 1.2e-56 224.9 295 49.8
FvH4_1g04330 Fragaria vesca HOM05D005514 ORTHO05D006563 2.6e-56 223.8 427 40.5
Lalb_Chr24g0397401 Lupinus albus HOM05D005514 ORTHO05D006563 3.4e-56 223.4 275 52.4
CsaV3_1G045730 Cucumis sativus L. HOM05D005514 ORTHO05D006563 2.2e-55 220.7 481 38.7
Cc06_g09930 Coffea canephora HOM05D005514 ORTHO05D006563 3.8e-55 219.9 272 52.2
MELO3C024688.2 Cucumis melo HOM05D005514 ORTHO05D006563 3.8e-55 219.9 481 38.9
FAN23G0542 Fragaria x ananassa HOM05D005514 ORTHO05D006563 6.5e-55 219.2 274 53.3
Lj2g0026530 Lotus japonicus HOM05D005514 ORTHO05D006563 4.2e-54 216.5 499 36.7
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea HOM05D005514 ORTHO05D006563 7.9e-53 212.2 275 51.6
FAN26G2817 Fragaria x ananassa HOM05D005514 ORTHO05D006563 7.9e-53 212.2 274 51.8
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea HOM05D005514 ORTHO05D006563 5.1e-52 209.5 275 51.3
FAN19G0406 Fragaria x ananassa HOM05D005514 ORTHO05D006563 1.9e-51 207.6 274 52.2
Potri.006G160500 Populus trichocarpa HOM05D005514 ORTHO05D006563 1.9e-51 207.6 456 43.6
Potri.018G083100 Populus trichocarpa HOM05D005514 ORTHO05D006563 3.3e-51 206.8 449 40.1
TWI23G1143 Tripterygium wilfordii HOM05D005514 ORTHO05D006563 7.4e-51 205.7 445 38.0
Cpa.g.sc23.79 Carica papaya HOM05D005514 ORTHO05D006563 1.1e-49 201.8 250 51.2
MD15G1181700 Malus domestica HOM05D005514 ORTHO05D006563 1.8e-49 201.1 263 48.7
ClCG06G008760 Citrullus lanatus HOM05D005514 ORTHO05D006563 2.2e-47 194.1 291 47.4
DCAR_028696 Daucus carota HOM05D005514 ORTHO05D006563 7.2e-46 189.1 415 37.1
MSTRG.26360 Avicennia marina HOM05D005514 ORTHO05D006563 2.7e-45 187.2 268 46.6
Lalb_Chr14g0371621 Lupinus albus HOM05D005514 ORTHO05D006563 1.3e-44 184.9 273 48.4
ECA234G0189 Erigeron canadensis HOM05D005514 ORTHO05D006563 1.8e-44 184.5 479 37.6
Haze_25771 Corylus avellana HOM05D005514 ORTHO05D006563 5.1e-44 183.0 254 48.4
Oeu064593.1 Olea europaea HOM05D005514 ORTHO05D006563 1.1e-43 181.8 309 43.7
PGSC0003DMG400027426 Solanum tuberosum HOM05D005514 ORTHO05D006563 1.1e-43 181.8 261 46.0
THA.LOC104804022 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 6.3e-42 176.0 462 37.4
Sed0015833 Sechium edule HOM05D005514 ORTHO05D006563 2.4e-41 174.1 469 35.2
Rhsim03G0240000 Rhododendron simsii HOM05D005514 ORTHO05D006563 5.3e-41 172.9 222 53.2
SEGI_01979 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 2.0e-40 171.0 280 43.9
Sed0026603 Sechium edule HOM05D005514 ORTHO05D006563 4.5e-40 169.9 540 32.4
Migut.K00501 Erythranthe guttata HOM05D005514 ORTHO05D006563 2.9e-39 167.2 448 35.9
COL.COLO4_34823 Corchorus olitorius HOM05D005514 ORTHO05D006563 5.5e-38 162.9 271 41.0
PGR142G2557 Punica granatum HOM05D005514 ORTHO05D006563 7.2e-38 162.5 445 35.5
ATR0315G038 Amborella trichopoda HOM05D005514 ORTHO05D006563 9.4e-38 162.2 295 41.4
Nn3g18098 Nelumbo nucifera HOM05D005514 ORTHO05D006563 2.8e-34 150.6 247 40.1
Lj7A655G38 Lonicera japonica HOM05D005514 ORTHO05D006563 1.1e-33 148.7 206 48.5
THA.LOC104820053 Tarenaya hassleriana HOM05D005514 ORTHO05D006563 1.1e-33 148.7 466 33.9
AL7G23470 Arabidopsis lyrata HOM05D005514 ORTHO05D006563 3.1e-33 147.1 426 34.5
GSVIVG01015362001 Vitis vinifera HOM05D005514 ORTHO05D006563 1.5e-32 144.8 334 34.7
Sabra18G0070900 Salix brachista HOM05D005514 ORTHO05D006563 1.3e-31 141.7 192 44.8
Lsat_1_v5_gn_5_102941 Lactuca sativa HOM05D005514 ORTHO05D006563 8.5e-31 139.0 239 43.9
CARHR236720 Cardamine hirsuta HOM05D005514 ORTHO05D006563 5.5e-30 136.3 449 32.7
CDE05G1480 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 1.4e-28 131.7 250 41.6
AT4G28990 Arabidopsis thaliana HOM05D005514 ORTHO05D006563 1.1e-27 128.6 428 32.9
BcaNung01339 Brassica carinata HOM05D005514 ORTHO05D006563 1.7e-26 124.8 460 32.0
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 8.2e-26 122.5 444 30.0
BcaNung00443 Brassica carinata HOM05D005514 ORTHO05D006563 2.4e-25 120.9 445 29.9
Os06g0332900 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 4.1e-25 120.2 270 40.0
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 9.1e-25 119.0 433 31.6
Sp7g26930 Schrenkiella parvula HOM05D005514 ORTHO05D006563 9.1e-25 119.0 446 30.5
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 1.6e-24 118.2 431 29.7
Thhalv10025603m.g Eutrema salsugineum HOM05D005514 ORTHO05D006563 1.6e-24 118.2 414 32.1
Zm00001eb147430 Zea mays HOM05D005514 ORTHO05D006563 1.3e-23 115.2 262 36.6
Aa31LG8G17060 Aethionema arabicum HOM05D005514 ORTHO05D006563 3.8e-23 113.6 486 30.0
Carub.0007s1165 Capsella rubella HOM05D005514 ORTHO05D006563 5.0e-23 113.2 433 31.9
CDE05G2615 Ceratophyllum demersum HOM05D005514 ORTHO05D006563 6.5e-23 112.8 431 30.9
SEGI_18875 Sequoiadendron giganteum HOM05D005514 ORTHO05D006563 1.6e-21 108.2 288 37.2
Mapoly0001s0121 Marchantia polymorpha HOM05D005514 ORTHO05D006563 7.5e-19 99.4 282 36.5
HPP92_000517 Vanilla planifolia HOM05D005514 ORTHO05D006563 7.5e-19 99.4 247 40.5
BcaC09g51675 Brassica carinata HOM05D005514 ORTHO05D006563 8.2e-18 95.9 409 27.4
Pp3c14_23580 Physcomitrium patens HOM05D005514 ORTHO05D006563 1.8e-17 94.7 279 34.1
BcaNung00440 Brassica carinata HOM05D005514 ORTHO05D006563 9.1e-17 92.4 423 28.8
Os02g0274700 Oryza sativa ssp. japonica HOM05D005514 ORTHO05D006563 1.3e-15 88.6 262 34.4
BcaNung02893 Brassica carinata HOM05D005514 ORTHO05D006563 6.5e-15 86.3 447 29.3
C07p56560 Brassica napus HOM05D005514 ORTHO05D006563 6.5e-15 86.3 447 29.3
BraA03t14917Z Brassica rapa HOM05D005514 ORTHO05D006563 6.5e-15 86.3 244 36.1
SMO169G0168 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 2.3e-12 77.8 115 44.3
BolC7t46134H Brassica oleracea HOM05D005514 ORTHO05D006563 4.0e-12 77.0 255 35.7
AagrBONN_evm.TU.Sc2ySwM_344.197 Anthoceros agrestis HOM05D005514 ORTHO05D006563 3.4e-11 73.9 104 44.2
CBR_g44542 Chara braunii HOM05D005514 ORTHO05D006563 7.5e-11 72.8 227 34.4
unitig_0.g2554 Utricularia gibba HOM05D005514 ORTHO05D006563 1.3e-10 72.0 139 38.8
SGA_v2.0_scaffold92G28280 Striga asiatica HOM05D005514 ORTHO05D006563 2.2e-10 71.2 187 35.8
Lsat_1_v5_gn_5_102961 Lactuca sativa HOM05D005514 ORTHO05D006563 3.7e-10 70.5 54 68.5
SMO116G0230 Selaginella moellendorffii HOM05D005514 ORTHO05D006563 7.0e-09 66.2 37 70.3
Oeu064594.1 Olea europaea HOM05D005514 ORTHO05D006563 4.5e-08 63.5 58 65.5
Potri.009G076600 Populus trichocarpa HOM05D002034 ORTHO05D006399 1.7e-07 61.6 38 65.8
unitig_26.g10217 Utricularia gibba HOM05D002034 ORTHO05D006399 2.2e-07 61.2 37 64.9
Sabra09G0058400 Salix brachista HOM05D002034 ORTHO05D006399 2.9e-07 60.8 38 63.2
DCAR_007354 Daucus carota HOM05D002034 ORTHO05D006399 3.8e-07 60.5 37 67.6
Migut.N00767 Erythranthe guttata HOM05D002034 ORTHO05D006399 3.8e-07 60.5 35 68.6
Manes.18G141005 Manihot esculenta HOM05D002034 ORTHO05D006399 5.0e-07 60.1 43 58.1
Sc21g0005190 Simmondsia chinensis HOM05D002034 ORTHO05D006399 5.0e-07 60.1 29 79.3
Cc06_g09940 Coffea canephora HOM05D005514 ORTHO05D006563 6.5e-07 59.7 68 55.9
Manes.02G216300 Manihot esculenta HOM05D002034 ORTHO05D006399 6.5e-07 59.7 43 58.1
Nn1g04222 Nelumbo nucifera HOM05D002034 ORTHO05D006399 6.5e-07 59.7 50 56.0
Sed0021639 Sechium edule HOM05D002034 ORTHO05D006399 6.5e-07 59.7 40 62.5
MD03G1060300 Malus domestica HOM05D002034 ORTHO05D006399 8.5e-07 59.3 29 79.3
MD15G1181500 Malus domestica HOM05D005514 ORTHO05D006563 8.5e-07 59.3 52 63.5
SEGI_19079 Sequoiadendron giganteum HOM05D002034 ORTHO05D006399 8.5e-07 59.3 34 64.7
Nitab4.5_0000967g0020 Nicotiana tabacum HOM05D002034 ORTHO05D006399 1.5e-06 58.5 41 61.0
Potri.001G281300 Populus trichocarpa HOM05D002034 ORTHO05D006399 1.5e-06 58.5 38 65.8
Prupe.6G050700 Prunus persica HOM05D002034 ORTHO05D006399 1.5e-06 58.5 38 63.2
Cfa011758 Carpinus fangiana HOM05D002034 ORTHO05D006399 1.9e-06 58.2 29 75.9
Nn2g13237 Nelumbo nucifera HOM05D002034 ORTHO05D006399 1.9e-06 58.2 36 69.4
Sabra16G0175000 Salix brachista HOM05D002034 ORTHO05D006399 1.9e-06 58.2 66 47.0
Lj1C128G5 Lonicera japonica HOM05D002034 ORTHO05D006399 3.2e-06 57.4 29 75.9
Hund18957 Selenicereus undatus HOM05D002034 ORTHO05D006399 3.2e-06 57.4 34 67.6
CiPaw.14G055200 Carya illinoinensis HOM05D002034 ORTHO05D006399 4.2e-06 57.0 29 72.4
Cc01_g14710 Coffea canephora HOM05D000417 ORTHO05D000342 4.2e-06 57.0 35 68.6
Dinv09661 Davidia involucrata HOM05D002034 ORTHO05D006399 4.2e-06 57.0 36 69.4
Duzib170G0382 Durio zibethinus HOM05D002034 ORTHO05D006399 4.2e-06 57.0 36 66.7
Nitab4.5_0004174g0030 Nicotiana tabacum HOM05D002034 ORTHO05D006399 4.2e-06 57.0 35 65.7
CSS0028239 Camellia sinensis var. sinensis HOM05D002034 ORTHO05D006399 5.5e-06 56.6 44 59.1
CSS0042328 Camellia sinensis var. sinensis HOM05D002034 ORTHO05D006399 5.5e-06 56.6 44 59.1
FvH4_3g39510 Fragaria vesca HOM05D002034 ORTHO05D006399 5.5e-06 56.6 29 72.4
FAN11G3559 Fragaria x ananassa HOM05D002034 ORTHO05D006399 5.5e-06 56.6 29 72.4
FAN16G2984 Fragaria x ananassa HOM05D002034 ORTHO05D006399 5.5e-06 56.6 29 72.4
FAN21G0003 Fragaria x ananassa HOM05D002034 ORTHO05D006399 5.5e-06 56.6 29 72.4
Gohir.A03G026200 Gossypium hirsutum HOM05D002034 ORTHO05D006399 5.5e-06 56.6 29 72.4
Gohir.D03G142100 Gossypium hirsutum HOM05D002034 ORTHO05D006399 5.5e-06 56.6 29 72.4
Gohir.D03G142300 Gossypium hirsutum HOM05D002034 ORTHO05D006399 5.5e-06 56.6 29 72.4
Gorai.003G149100 Gossypium raimondii HOM05D002034 ORTHO05D006399 5.5e-06 56.6 29 72.4
Gorai.003G149400 Gossypium raimondii HOM05D002034 ORTHO05D006399 5.5e-06 56.6 29 72.4
MBI05_g02399_MAGBIO Magnolia biondii HOM05D002034 ORTHO05D006399 5.5e-06 56.6 36 66.7
HPP92_003242 Vanilla planifolia HOM05D002034 ORTHO05D006399 5.5e-06 56.6 43 58.1
GSVIVG01030073001 Vitis vinifera HOM05D000417 ORTHO05D000342 5.5e-06 56.6 29 72.4
ClCG03G000290 Citrullus lanatus HOM05D002034 ORTHO05D006399 7.2e-06 56.2 40 60.0
CsaV3_1G036630 Cucumis sativus L. HOM05D002034 ORTHO05D006399 7.2e-06 56.2 40 60.0
Duzib168G0356 Durio zibethinus HOM05D002034 ORTHO05D006399 7.2e-06 56.2 29 72.4
Hma1.2p1_0146F.1_g065460 Hydrangea macrophylla HOM05D002034 ORTHO05D006399 7.2e-06 56.2 29 72.4
RcHm_v2.0_Chr5g0071281 Rosa chinensis HOM05D002034 ORTHO05D006399 7.2e-06 56.2 29 72.4
vmacro14615 Vaccinium macrocarpon HOM05D002034 ORTHO05D006399 7.2e-06 56.2 36 66.7
Ah.08g215230 Amaranthus hybridus HOM05D002034 ORTHO05D006399 9.4e-06 55.8 29 72.4
arahy.Tifrunner.gnm1.ann1.99AA0S Arachis hypogaea HOM05D002034 ORTHO05D006399 9.4e-06 55.8 29 75.9
MELO3C020506.2 Cucumis melo HOM05D002034 ORTHO05D006399 9.4e-06 55.8 39 61.5
Glyma.02G230600 Glycine max HOM05D002034 ORTHO05D006399 9.4e-06 55.8 29 72.4
Glyma.14G197700 Glycine max HOM05D002034 ORTHO05D006399 9.4e-06 55.8 29 72.4
MD11G1063400 Malus domestica HOM05D002034 ORTHO05D006399 9.4e-06 55.8 29 72.4
SGA_v2.0_scaffold104G30143 Striga asiatica HOM05D002034 ORTHO05D006399 9.4e-06 55.8 35 65.7
Zm00001eb123460 Zea mays HOM05D002034 ORTHO05D006399 9.4e-06 55.8 29 72.4


User provided reference genes

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