Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01552 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 1.6e-35 152.1 73 100.0
COL.COLO4_31069 Corchorus olitorius HOM05D005618 ORTHO05D007278 4.3e-12 74.3 38 89.5
Ah.09g232560 Amaranthus hybridus HOM05D005618 ORTHO05D007278 1.6e-11 72.4 38 84.2
Duzib235G0110 Durio zibethinus HOM05D005618 ORTHO05D007278 1.6e-11 72.4 38 86.8
Peaxi162Scf01211g00117 Petunia axillaris HOM05D005618 ORTHO05D007278 1.6e-11 72.4 38 84.2
Lj2A305G54 Lonicera japonica HOM05D005618 ORTHO05D007278 2.1e-11 72.0 36 88.9
Thecc.06G150300 Theobroma cacao HOM05D005618 ORTHO05D007278 2.1e-11 72.0 38 84.2
Cpa.g.c46789 Carica papaya HOM05D005618 ORTHO05D007278 2.8e-11 71.6 38 84.2
Gohir.A10G041000 Gossypium hirsutum HOM05D005618 ORTHO05D007278 2.8e-11 71.6 38 86.8
Gohir.D10G041800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 2.8e-11 71.6 38 86.8
Gorai.011G044400 Gossypium raimondii HOM05D005618 ORTHO05D007278 2.8e-11 71.6 38 86.8
Hma1.2p1_0053F.1_g030930 Hydrangea macrophylla HOM05D005618 ORTHO05D007278 2.8e-11 71.6 38 84.2
SalBow8G3565 Salvia bowleyana HOM05D005618 ORTHO05D007278 2.8e-11 71.6 38 84.2
QL05p057939 Quercus lobata HOM05D005618 ORTHO05D007278 3.6e-11 71.2 37 83.8
Eucgr.D00295 Eucalyptus grandis HOM05D005618 ORTHO05D007278 6.1e-11 70.5 38 81.6
Lalb_Chr05g0219641 Lupinus albus HOM05D005618 ORTHO05D007278 6.1e-11 70.5 38 81.6
MBI10_g30420_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 6.1e-11 70.5 38 81.6
PSO541G3455 Papaver somniferum HOM05D005618 ORTHO05D007278 6.1e-11 70.5 38 81.6
PSO675G5881 Papaver somniferum HOM05D005618 ORTHO05D007278 6.1e-11 70.5 38 81.6
TAR626G0061 Trochodendron aralioides HOM05D005618 ORTHO05D007278 6.1e-11 70.5 38 84.2
Migut.M00907 Erythranthe guttata HOM05D005618 ORTHO05D007278 8.0e-11 70.1 38 81.6
Sc17g0004900 Simmondsia chinensis HOM05D005618 ORTHO05D007278 8.0e-11 70.1 38 81.6
TWI53G0952 Tripterygium wilfordii HOM05D005618 ORTHO05D007278 1.0e-10 69.7 38 81.6
TAR624G0623 Trochodendron aralioides HOM05D005618 ORTHO05D007278 1.0e-10 69.7 38 81.6
CiPaw.09G123100 Carya illinoinensis HOM05D005618 ORTHO05D007278 1.4e-10 69.3 36 83.3
CiPaw.10G091700 Carya illinoinensis HOM05D005618 ORTHO05D007278 1.4e-10 69.3 36 83.3
Ciclev10016692m.g Citrus clementina HOM05D005618 ORTHO05D007278 1.4e-10 69.3 36 83.3
Duzib192G0044 Durio zibethinus HOM05D005618 ORTHO05D007278 1.4e-10 69.3 36 83.3
vmacro10962 Vaccinium macrocarpon HOM05D005618 ORTHO05D007278 1.4e-10 69.3 38 78.9
Cfa000939 Carpinus fangiana HOM05D005618 ORTHO05D007278 1.8e-10 68.9 37 81.1
ECA236G2996 Erigeron canadensis HOM05D005618 ORTHO05D007278 1.8e-10 68.9 38 76.3
CSS0012983 Camellia sinensis var. sinensis HOM05D005618 ORTHO05D007278 2.3e-10 68.6 38 78.9
CAN.G50.16 Capsicum annuum HOM05D005618 ORTHO05D007278 2.3e-10 68.6 36 80.6
AUR62002738 Chenopodium quinoa HOM05D005618 ORTHO05D007278 2.3e-10 68.6 38 81.6
AUR62030187 Chenopodium quinoa HOM05D005618 ORTHO05D007278 2.3e-10 68.6 38 81.6
Cc00_g08440 Coffea canephora HOM05D005618 ORTHO05D007278 2.3e-10 68.6 38 78.9
HanXRQChr15g0480861 Helianthus annuus HOM05D005618 ORTHO05D007278 2.3e-10 68.6 38 76.3
Lj4g0005080 Lotus japonicus HOM05D005618 ORTHO05D007278 2.3e-10 68.6 38 78.9
Ca_18751_v3 Cicer arietinum L. HOM05D005618 ORTHO05D007278 3.1e-10 68.2 38 76.3
Dinv32254 Davidia involucrata HOM05D005618 ORTHO05D007278 3.1e-10 68.2 36 80.6
FvH4_3g05510 Fragaria vesca HOM05D005618 ORTHO05D007278 3.1e-10 68.2 38 78.9
FAN11G3487 Fragaria x ananassa HOM05D005618 ORTHO05D007278 3.1e-10 68.2 38 78.9
FAN16G1298 Fragaria x ananassa HOM05D005618 ORTHO05D007278 3.1e-10 68.2 38 78.9
FAN21G3768 Fragaria x ananassa HOM05D005618 ORTHO05D007278 3.1e-10 68.2 38 78.9
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 3.1e-10 68.2 38 78.9
Manes.17G070300 Manihot esculenta HOM05D005618 ORTHO05D007278 3.1e-10 68.2 38 78.9
Medtr4g084250 Medicago truncatula HOM05D005618 ORTHO05D007278 3.1e-10 68.2 38 76.3
Potri.011G085100 Populus trichocarpa HOM05D005618 ORTHO05D007278 3.1e-10 68.2 38 78.9
RcHm_v2.0_Chr5g0014231 Rosa chinensis HOM05D005618 ORTHO05D007278 3.1e-10 68.2 38 78.9
Sabra11G0067000 Salix brachista HOM05D005618 ORTHO05D007278 3.1e-10 68.2 38 78.9
Sabra11G0068900 Salix brachista HOM05D005618 ORTHO05D007278 3.1e-10 68.2 38 78.9
SEGI_02039 Sequoiadendron giganteum HOM05D005618 ORTHO05D007278 3.1e-10 68.2 39 76.9
SGA_v2.0_scaffold333G48991 Striga asiatica HOM05D005618 ORTHO05D007278 3.1e-10 68.2 34 88.2
TPR.G38285 Trifolium pratense HOM05D005618 ORTHO05D007278 3.1e-10 68.2 38 76.3
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 4.0e-10 67.8 38 76.3
DCAR_003916 Daucus carota HOM05D005618 ORTHO05D007278 4.0e-10 67.8 36 77.8
Glyma.07G220200 Glycine max HOM05D005618 ORTHO05D007278 4.0e-10 67.8 38 76.3
arahy.Tifrunner.gnm1.ann1.LME4NB Arachis hypogaea HOM05D005618 ORTHO05D007278 5.2e-10 67.4 38 76.3
arahy.Tifrunner.gnm1.ann1.R3FQ90 Arachis hypogaea HOM05D005618 ORTHO05D007278 5.2e-10 67.4 38 76.3
MSTRG.16244 Avicennia marina HOM05D005618 ORTHO05D007278 5.2e-10 67.4 38 76.3
Nn3g20783 Nelumbo nucifera HOM05D005618 ORTHO05D007278 5.2e-10 67.4 38 76.3
Phvul.002G096900 Phaseolus vulgaris HOM05D005618 ORTHO05D007278 5.2e-10 67.4 38 78.9
Hund21546 Selenicereus undatus HOM05D005618 ORTHO05D007278 5.2e-10 67.4 36 83.3
HPP92_020290 Vanilla planifolia HOM05D005618 ORTHO05D007278 5.2e-10 67.4 36 80.6
Aa31LG6G5600 Aethionema arabicum HOM05D005618 ORTHO05D007278 6.8e-10 67.0 34 85.3
MBI18_g05573_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 6.8e-10 67.0 37 78.4
Nitab4.5_0006887g0020 Nicotiana tabacum HOM05D005618 ORTHO05D007278 6.8e-10 67.0 36 77.8
Solyc08g016670.3 Solanum lycopersicum HOM05D005618 ORTHO05D007278 6.8e-10 67.0 36 77.8
Glyma.20G018500 Glycine max HOM05D005618 ORTHO05D007278 8.9e-10 66.6 38 73.7
Gohir.A05G148300 Gossypium hirsutum HOM05D005618 ORTHO05D007278 8.9e-10 66.6 38 78.9
Nn4g26571 Nelumbo nucifera HOM05D005618 ORTHO05D007278 8.9e-10 66.6 36 77.8
VMungo0251G3758 Vigna mungo HOM05D005618 ORTHO05D007278 8.9e-10 66.6 38 76.3
GSVIVG01021471001 Vitis vinifera HOM05D005618 ORTHO05D007278 8.9e-10 66.6 38 76.3
CDE06G1306 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 1.2e-09 66.2 38 73.7
PGSC0003DMG400012093 Solanum tuberosum HOM05D005618 ORTHO05D007278 1.2e-09 66.2 36 77.8
unitig_32.g11444 Utricularia gibba HOM05D005618 ORTHO05D007278 1.2e-09 66.2 38 73.7
ClCG03G006840 Citrullus lanatus HOM05D005618 ORTHO05D007278 1.5e-09 65.9 37 75.7
Sopen08g007080 Solanum pennellii HOM05D005618 ORTHO05D007278 1.5e-09 65.9 36 75.0
SGA_v2.0_scaffold1G00178 Striga asiatica HOM05D005618 ORTHO05D007278 1.5e-09 65.9 34 85.3
CANSAT35G0334 Cannabis sativa HOM05D005618 ORTHO05D007278 2.0e-09 65.5 34 82.4
MELO3C002736.2 Cucumis melo HOM05D005618 ORTHO05D007278 2.0e-09 65.5 36 75.0
Lalb_Chr09g0328651 Lupinus albus HOM05D005618 ORTHO05D007278 2.0e-09 65.5 33 84.8
Nitab4.5_0000420g0030 Nicotiana tabacum HOM05D005618 ORTHO05D007278 2.0e-09 65.5 35 80.0
Oeu052366.1 Olea europaea HOM05D005618 ORTHO05D007278 2.0e-09 65.5 36 80.6
PGR083G1302 Punica granatum HOM05D005618 ORTHO05D007278 2.0e-09 65.5 38 76.3
THA.LOC104820649 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 2.0e-09 65.5 34 82.4
CDE02G0590 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 3.4e-09 64.7 38 73.7
AUR62026670 Chenopodium quinoa HOM05D005618 ORTHO05D007278 3.4e-09 64.7 38 76.3
CsaV3_1G032420 Cucumis sativus L. HOM05D005618 ORTHO05D007278 4.4e-09 64.3 36 72.2
Thhalv10002717m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 4.4e-09 64.3 34 82.4
Thhalv10008455m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 4.4e-09 64.3 34 82.4
THA.LOC104814300 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 4.4e-09 64.3 34 82.4
Lsat_1_v5_gn_7_28281 Lactuca sativa HOM05D005618 ORTHO05D007278 5.8e-09 63.9 36 72.2
SHI24907 Sapria himalayana HOM05D005618 ORTHO05D007278 5.8e-09 63.9 38 73.7
Carub.0001s2829 Capsella rubella HOM05D005618 ORTHO05D007278 7.5e-09 63.5 34 79.4
Sed0020286 Sechium edule HOM05D005618 ORTHO05D007278 7.5e-09 63.5 36 72.2
Zm00001eb152680 Zea mays HOM05D005618 ORTHO05D007278 7.5e-09 63.5 37 75.7
Gohir.D05G150800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 9.8e-09 63.2 38 76.3
Gorai.009G154900 Gossypium raimondii HOM05D005618 ORTHO05D007278 9.8e-09 63.2 38 76.3
Psat7g130040 Pisum sativum HOM05D005618 ORTHO05D007278 9.8e-09 63.2 35 77.1
Zm00001eb370650 Zea mays HOM05D005618 ORTHO05D007278 9.8e-09 63.2 37 75.7
Actinidia07695 Actinidia chinensis HOM05D005618 ORTHO05D007278 1.3e-08 62.8 38 73.7
Os01g0757500 Oryza sativa ssp. japonica HOM05D005618 ORTHO05D007278 1.3e-08 62.8 34 79.4
Actinidia39574 Actinidia chinensis HOM05D005618 ORTHO05D007278 1.7e-08 62.4 38 71.1
AL1G43960 Arabidopsis lyrata HOM05D005618 ORTHO05D007278 1.7e-08 62.4 34 76.5
AT1G30070 Arabidopsis thaliana HOM05D005618 ORTHO05D007278 1.7e-08 62.4 34 76.5
Oeu034148.1 Olea europaea HOM05D005618 ORTHO05D007278 1.7e-08 62.4 36 75.0
Aqoxy1G01706 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 2.2e-08 62.0 31 87.1
MSTRG.7487 Avicennia marina HOM05D005618 ORTHO05D007278 2.2e-08 62.0 34 76.5
CARHR029340 Cardamine hirsuta HOM05D005618 ORTHO05D007278 2.9e-08 61.6 34 76.5
Manes.15G121800 Manihot esculenta HOM05D005618 ORTHO05D007278 2.9e-08 61.6 38 68.4
Mapoly0148s0015 Marchantia polymorpha HOM05D005618 ORTHO05D007278 3.7e-08 61.2 36 69.4
Sp1g25930 Schrenkiella parvula HOM05D005618 ORTHO05D007278 3.7e-08 61.2 34 79.4
ATR0730G012 Amborella trichopoda HOM05D005618 ORTHO05D007278 1.4e-07 59.3 33 75.8
BcaB07g32606 Brassica carinata HOM05D005618 ORTHO05D007278 3.2e-07 58.2 34 76.5
BcaC05g27023 Brassica carinata HOM05D005618 ORTHO05D007278 4.1e-07 57.8 34 76.5
A09p36460 Brassica napus HOM05D005618 ORTHO05D007278 4.1e-07 57.8 34 76.5
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 4.1e-07 57.8 34 76.5
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 4.1e-07 57.8 34 76.5
BraA09t39168Z Brassica rapa HOM05D005618 ORTHO05D007278 4.1e-07 57.8 34 76.5
Pp3c4_13920 Physcomitrium patens HOM05D005618 ORTHO05D007278 2.0e-06 55.5 28 82.1
MD05G1283600 Malus domestica HOM05D005618 ORTHO05D007278 7.8e-06 53.5 29 79.3


User provided reference genes

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