Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01527 Aquilegia oxysepala HOM05D006031 ORTHO05D007417 5.3e-119 431.0 216 100.0
QL02p044744 Quercus lobata HOM05D006031 ORTHO05D007417 8.2e-96 354.0 209 82.3
GSVIVG01015348001 Vitis vinifera HOM05D006031 ORTHO05D007417 3.1e-95 352.1 209 81.8
Hma1.2p1_0945F.1_g240050 Hydrangea macrophylla HOM05D006031 ORTHO05D007417 1.6e-94 349.7 209 79.9
PSO566G0179 Papaver somniferum HOM05D006031 ORTHO05D007417 1.6e-94 349.7 210 78.1
Atru.chr7.1388 Acer truncatum HOM05D006031 ORTHO05D007417 2.7e-94 349.0 209 81.8
Sopen12g002000 Solanum pennellii HOM05D006031 ORTHO05D007417 2.7e-94 349.0 213 77.9
Lsat_1_v5_gn_4_6541 Lactuca sativa HOM05D006031 ORTHO05D007417 3.5e-94 348.6 211 77.7
Manes.03G024000 Manihot esculenta HOM05D006031 ORTHO05D007417 3.5e-94 348.6 209 81.8
Solyc12g006030.2 Solanum lycopersicum HOM05D006031 ORTHO05D007417 4.5e-94 348.2 210 79.0
Ca_25548_v3 Cicer arietinum L. HOM05D006031 ORTHO05D007417 7.7e-94 347.4 213 77.9
Dinv41637 Davidia involucrata HOM05D006031 ORTHO05D007417 7.7e-94 347.4 208 79.8
Nn2g11655 Nelumbo nucifera HOM05D006031 ORTHO05D007417 7.7e-94 347.4 205 82.9
Cc06_g10050 Coffea canephora HOM05D006031 ORTHO05D007417 1.0e-93 347.1 209 80.4
COL.COLO4_34809 Corchorus olitorius HOM05D006031 ORTHO05D007417 1.0e-93 347.1 208 80.8
TAR624G0502 Trochodendron aralioides HOM05D006031 ORTHO05D007417 1.3e-93 346.7 205 82.4
MBI04_g14932_MAGBIO Magnolia biondii HOM05D006031 ORTHO05D007417 2.2e-93 345.9 205 79.0
PSO782G0755 Papaver somniferum HOM05D006031 ORTHO05D007417 2.9e-93 345.5 210 76.7
CiPaw.03G228000 Carya illinoinensis HOM05D006031 ORTHO05D007417 3.8e-93 345.1 209 81.8
Thecc.09G105700 Theobroma cacao HOM05D006031 ORTHO05D007417 3.8e-93 345.1 209 79.9
Sabra18G0072100 Salix brachista HOM05D006031 ORTHO05D007417 6.5e-93 344.4 209 79.4
CANSAT56G1289 Cannabis sativa HOM05D006031 ORTHO05D007417 1.1e-92 343.6 206 81.1
Gorai.010G073700 Gossypium raimondii HOM05D006031 ORTHO05D007417 1.9e-92 342.8 209 79.4
HanXRQChr17g0570151 Helianthus annuus HOM05D006031 ORTHO05D007417 1.9e-92 342.8 211 76.3
TPR.G34905 Trifolium pratense HOM05D006031 ORTHO05D007417 1.9e-92 342.8 209 78.0
Actinidia20400 Actinidia chinensis HOM05D006031 ORTHO05D007417 4.2e-92 341.7 207 77.3
Gohir.A06G064600 Gossypium hirsutum HOM05D006031 ORTHO05D007417 4.2e-92 341.7 209 78.9
Cpa.g.sc12.30 Carica papaya HOM05D006031 ORTHO05D007417 5.5e-92 341.3 208 80.3
MD02G1057400 Malus domestica HOM05D006031 ORTHO05D007417 9.4e-92 340.5 206 79.1
CAN.G478.5 Capsicum annuum HOM05D006031 ORTHO05D007417 1.6e-91 339.7 210 77.1
Lalb_Chr22g0352651 Lupinus albus HOM05D006031 ORTHO05D007417 1.6e-91 339.7 209 78.0
Nitab4.5_0000952g0030 Nicotiana tabacum HOM05D006031 ORTHO05D007417 2.7e-91 339.0 210 76.7
Gohir.D06G063200 Gossypium hirsutum HOM05D006031 ORTHO05D007417 3.6e-91 338.6 209 78.5
Medtr1g035260 Medicago truncatula HOM05D006031 ORTHO05D007417 4.7e-91 338.2 209 77.0
Potri.018G083800 Populus trichocarpa HOM05D006031 ORTHO05D007417 1.0e-90 337.0 209 77.5
Eucgr.C03802 Eucalyptus grandis HOM05D006031 ORTHO05D007417 1.4e-90 336.7 206 79.1
PGR102G2811 Punica granatum HOM05D006031 ORTHO05D007417 1.4e-90 336.7 209 77.0
RcHm_v2.0_Chr2g0091271 Rosa chinensis HOM05D006031 ORTHO05D007417 1.8e-90 336.3 209 77.0
TWI63G0954 Tripterygium wilfordii HOM05D006031 ORTHO05D007417 1.8e-90 336.3 209 78.9
FAN23G2797 Fragaria x ananassa HOM05D006031 ORTHO05D007417 2.3e-90 335.9 209 77.5
Aa31LG2G21560 Aethionema arabicum HOM05D006031 ORTHO05D007417 3.0e-90 335.5 208 77.4
arahy.Tifrunner.gnm1.ann1.4UU729 Arachis hypogaea HOM05D006031 ORTHO05D007417 3.0e-90 335.5 209 77.5
ECA234G3380 Erigeron canadensis HOM05D006031 ORTHO05D007417 3.0e-90 335.5 205 78.5
Nitab4.5_0000010g0020 Nicotiana tabacum HOM05D006031 ORTHO05D007417 5.2e-90 334.7 210 75.7
Migut.K00493 Erythranthe guttata HOM05D006031 ORTHO05D007417 6.8e-90 334.3 209 78.0
arahy.Tifrunner.gnm1.ann1.P4D2XC Arachis hypogaea HOM05D006031 ORTHO05D007417 8.8e-90 334.0 209 77.0
FAN26G3395 Fragaria x ananassa HOM05D006031 ORTHO05D007417 8.8e-90 334.0 209 77.0
VMungo0464G0135 Vigna mungo HOM05D006031 ORTHO05D007417 8.8e-90 334.0 212 75.9
Ciclev10009448m.g Citrus clementina HOM05D006031 ORTHO05D007417 1.5e-89 333.2 212 80.2
MELO3C004569.2 Cucumis melo HOM05D006031 ORTHO05D007417 1.5e-89 333.2 211 74.4
ATR0315G117 Amborella trichopoda HOM05D006031 ORTHO05D007417 2.0e-89 332.8 212 75.0
FAN26G0948 Fragaria x ananassa HOM05D006031 ORTHO05D007417 2.0e-89 332.8 209 77.0
FvH4_1g05640 Fragaria vesca HOM05D006031 ORTHO05D007417 2.6e-89 332.4 211 76.3
Sc18g0001360 Simmondsia chinensis HOM05D006031 ORTHO05D007417 2.6e-89 332.4 205 78.5
C01p10630 Brassica napus HOM05D006031 ORTHO05D007417 3.4e-89 332.0 208 76.4
AUR62021455 Chenopodium quinoa HOM05D006031 ORTHO05D007417 3.4e-89 332.0 205 78.5
Thhalv10026253m.g Eutrema salsugineum HOM05D006031 ORTHO05D007417 3.4e-89 332.0 207 78.3
Phvul.004G168000 Phaseolus vulgaris HOM05D006031 ORTHO05D007417 4.4e-89 331.6 211 75.8
CsaV3_2G002120 Cucumis sativus L. HOM05D006031 ORTHO05D007417 5.7e-89 331.3 211 74.4
EL10Ac8g18430 Beta vulgaris HOM05D006031 ORTHO05D007417 9.8e-89 330.5 207 77.3
A01p09080 Brassica napus HOM05D006031 ORTHO05D007417 9.8e-89 330.5 208 76.9
A03p58440 Brassica napus HOM05D006031 ORTHO05D007417 1.3e-88 330.1 208 75.5
BcaC09g51657 Brassica carinata HOM05D006031 ORTHO05D007417 2.2e-88 329.3 208 76.0
BolC1t01025H Brassica oleracea HOM05D006031 ORTHO05D007417 2.2e-88 329.3 208 76.0
Glyma.01G145300 Glycine max HOM05D006031 ORTHO05D007417 2.2e-88 329.3 211 75.4
Peaxi162Scf00539g00717 Petunia axillaris HOM05D006031 ORTHO05D007417 2.2e-88 329.3 210 75.2
BolC7t46125H Brassica oleracea HOM05D006031 ORTHO05D007417 2.8e-88 328.9 208 75.5
BraA03t14904Z Brassica rapa HOM05D006031 ORTHO05D007417 2.8e-88 328.9 208 75.0
BcaNung01361 Brassica carinata HOM05D006031 ORTHO05D007417 3.7e-88 328.6 208 76.0
Carub.0007s1181 Capsella rubella HOM05D006031 ORTHO05D007417 3.7e-88 328.6 208 76.4
THA.LOC104804018 Tarenaya hassleriana HOM05D006031 ORTHO05D007417 3.7e-88 328.6 205 77.1
Hund26230 Selenicereus undatus HOM05D006031 ORTHO05D007417 4.8e-88 328.2 205 77.1
C07p56460 Brassica napus HOM05D006031 ORTHO05D007417 8.3e-88 327.4 208 75.0
BraA01t00856Z Brassica rapa HOM05D006031 ORTHO05D007417 8.3e-88 327.4 208 75.5
AT4G28830 Arabidopsis thaliana HOM05D006031 ORTHO05D007417 1.1e-87 327.0 208 76.0
Sp7g26830 Schrenkiella parvula HOM05D006031 ORTHO05D007417 1.4e-87 326.6 208 76.0
CSS0004856 Camellia sinensis var. sinensis HOM05D006031 ORTHO05D007417 3.1e-87 325.5 210 73.3
BcaC06g32602 Brassica carinata HOM05D006031 ORTHO05D007417 9.1e-87 323.9 208 74.0
AL7G23660 Arabidopsis lyrata HOM05D006031 ORTHO05D007417 1.6e-86 323.2 208 75.5
ClCG11G002340 Citrullus lanatus HOM05D006031 ORTHO05D007417 2.7e-86 322.4 232 68.5
SalBow3G0984 Salvia bowleyana HOM05D006031 ORTHO05D007417 7.7e-86 320.9 213 74.6
CDE02G2180 Ceratophyllum demersum HOM05D006031 ORTHO05D007417 1.7e-85 319.7 215 71.6
Actinidia09434 Actinidia chinensis HOM05D006031 ORTHO05D007417 2.5e-84 315.8 209 74.2
AUR62010942 Chenopodium quinoa HOM05D006031 ORTHO05D007417 3.2e-84 315.5 205 76.1
HPP92_005270 Vanilla planifolia HOM05D006031 ORTHO05D007417 5.5e-84 314.7 210 71.4
Zm00001eb271370 Zea mays HOM05D006031 ORTHO05D007417 2.6e-81 305.8 211 71.6
Os06g0162600 Oryza sativa ssp. japonica HOM05D006031 ORTHO05D007417 3.4e-81 305.4 210 69.0
Ah.09g230920 Amaranthus hybridus HOM05D006031 ORTHO05D007417 9.8e-81 303.9 186 76.9
Cfa003225 Carpinus fangiana HOM05D006031 ORTHO05D007417 3.1e-79 298.9 209 73.2
vmacro10877 Vaccinium macrocarpon HOM05D006031 ORTHO05D007417 3.1e-79 298.9 209 70.3
Mapoly0136s0020 Marchantia polymorpha HOM05D006031 ORTHO05D007417 4.1e-79 298.5 203 68.5
Duzib150G0325 Durio zibethinus HOM05D006031 ORTHO05D007417 1.6e-78 296.6 209 71.3
SGA_v2.0_scaffold387G50523 Striga asiatica HOM05D006031 ORTHO05D007417 3.5e-78 295.4 215 67.4
AagrBONN_evm.TU.Sc2ySwM_228.3645 Anthoceros agrestis HOM05D006031 ORTHO05D007417 5.0e-77 291.6 203 68.0
Pp3c6_12910 Physcomitrium patens HOM05D006031 ORTHO05D007417 1.1e-76 290.4 203 67.5
unitig_62.g23476 Utricularia gibba HOM05D006031 ORTHO05D007417 1.9e-76 289.7 214 67.8
SMO164G0018 Selaginella moellendorffii HOM05D006031 ORTHO05D007417 8.9e-74 280.8 203 66.5
CARHR236620 Cardamine hirsuta HOM05D006031 ORTHO05D007417 1.2e-73 280.4 207 68.1
Hma1.2p1_0945F.1_g240060 Hydrangea macrophylla HOM05D006031 ORTHO05D007417 1.2e-73 280.4 166 79.5
Prupe.7G225500 Prunus persica HOM05D006031 ORTHO05D007417 1.2e-73 280.4 178 77.5
ClCG06G015420 Citrullus lanatus HOM05D006031 ORTHO05D007417 5.7e-73 278.1 175 74.3
SMO304G0145 Selaginella moellendorffii HOM05D006031 ORTHO05D007417 5.7e-73 278.1 203 66.0
Dinv41633 Davidia involucrata HOM05D006031 ORTHO05D007417 2.2e-72 276.2 169 77.5
Haze_25783 Corylus avellana HOM05D006031 ORTHO05D007417 1.8e-71 273.1 190 72.1
Rhsim05G0043800 Rhododendron simsii HOM05D006031 ORTHO05D000070 1.2e-65 253.8 253 54.2
Psat1g044640 Pisum sativum HOM05D006031 ORTHO05D007417 2.7e-62 242.7 157 73.9
Lj2g0026722 Lotus japonicus HOM05D006031 ORTHO05D007417 7.8e-62 241.1 163 73.0
MSTRG.26365 Avicennia marina HOM05D006031 ORTHO05D007417 1.3e-61 240.4 157 76.4
PGSC0003DMG400013889 Solanum tuberosum HOM05D000011 ORTHO05D007417 5.0e-61 238.4 194 61.3
Sed0012983 Sechium edule HOM05D006031 ORTHO05D007417 2.1e-54 216.5 142 69.7
CBR_g49195 Chara braunii HOM05D005459 ORTHO05D006751 4.7e-51 205.3 182 56.0
Cre08.g384700 Chlamydomonas reinhardtii HOM05D006031 ORTHO05D007417 4.7e-51 205.3 211 48.8
arahy.Tifrunner.gnm1.ann1.PEIA6U Arachis hypogaea HOM05D006031 ORTHO05D007417 5.8e-49 198.4 158 63.3
PRCOL_00003743 Prasinoderma coloniale HOM05D006031 ORTHO05D007417 1.1e-47 194.1 215 45.1
Zm00001eb271350 Zea mays HOM05D006031 ORTHO05D007417 1.5e-44 183.7 129 69.8
Zm00001eb442390 Zea mays HOM05D006031 ORTHO05D007417 1.5e-44 183.7 129 69.8
DCAR_012059 Daucus carota HOM05D006031 ORTHO05D007417 1.2e-43 180.6 142 66.9
MCO05G480 Micromonas commoda HOM05D006031 ORTHO05D007417 3.6e-43 179.1 210 49.0
Haze_26211 Corylus avellana HOM05D006031 ORTHO05D007417 2.7e-38 162.9 223 42.2
Haze_27462 Corylus avellana HOM05D006031 ORTHO05D007417 2.7e-38 162.9 223 42.2
Lj4A429T15 Lonicera japonica HOM05D006031 ORTHO05D007417 7.3e-36 154.8 95 77.9
PRCOL_00005480 Prasinoderma coloniale HOM05D006031 ORTHO05D007417 2.4e-23 113.2 196 35.2
Lsat_1_v5_gn_8_38160 Lactuca sativa HOM05D006031 ORTHO05D007417 1.6e-22 110.5 104 58.7
BcaC09g51665 Brassica carinata HOM05D006031 ORTHO05D007417 5.1e-21 105.5 89 59.6
SEGI_07643 Sequoiadendron giganteum HOM05D006031 ORTHO05D007417 2.4e-18 96.7 65 66.2
AUR62033208 Chenopodium quinoa HOM05D003603 ORTHO05D004186 2.9e-16 89.7 53 81.1
AUR62044225 Chenopodium quinoa HOM05D003603 ORTHO05D004186 2.9e-16 89.7 52 82.7
Glyma.09G193200 Glycine max HOM05D006031 ORTHO05D007417 2.1e-14 83.6 73 58.9
Zm00001eb271390 Zea mays HOM05D006031 ORTHO05D007417 1.3e-13 80.9 53 75.5
SEGI_21752 Sequoiadendron giganteum HOM05D006031 ORTHO05D007417 1.8e-13 80.5 57 64.9
VMungo0464G0776 Vigna mungo HOM05D000002 ORTHO05D000001 5.1e-13 79.0 44 81.8
MBI06_g04307_MAGBIO Magnolia biondii HOM05D006031 ORTHO05D007417 1.8e-10 70.5 134 38.1
Lj4C429T0 Lonicera japonica HOM05D002180 ORTHO05D001339 5.9e-09 65.5 38 81.6
PGSC0003DMG400015828 Solanum tuberosum HOM05D000124 ORTHO05D397188 2.9e-08 63.2 36 66.7
Medtr6g087210 Medicago truncatula HOM05D006031 ORTHO05D007417 5.0e-08 62.4 50 58.0
Thhalv10002738m.g Eutrema salsugineum HOM05D006031 ORTHO05D007417 3.2e-07 59.7 39 76.9
Lsat_1_v5_gn_2_108580 Lactuca sativa HOM05D006031 ORTHO05D007417 5.5e-07 58.9 39 79.5
COL.COLO4_34793 Corchorus olitorius HOM05D006031 ORTHO05D007417 7.9e-06 55.1 32 81.2


User provided reference genes

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