Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01525 Aquilegia oxysepala HOM05D003644 ORTHO05D004305 3.1e-99 365.2 187 100.0
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 1.0e-30 137.5 198 48.0
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 1.8e-30 136.7 199 47.2
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 2.9e-28 129.4 196 49.0
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 6.0e-26 121.7 202 44.6
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 2.3e-25 119.8 199 44.2
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 2.3e-25 119.8 199 44.2
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 3.9e-25 119.0 196 43.9
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 8.6e-25 117.9 195 44.1
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 1.9e-24 116.7 196 40.8
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 7.3e-24 114.8 197 42.6
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 2.1e-23 113.2 203 41.9
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 2.8e-23 112.8 201 42.3
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 3.6e-23 112.5 199 40.7
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 2.3e-22 109.8 205 42.9
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 6.8e-22 108.2 197 41.6
A09p59020 Brassica napus HOM05D003644 ORTHO05D004305 8.9e-22 107.8 179 41.3
BraA09t41288Z Brassica rapa HOM05D003644 ORTHO05D004305 8.9e-22 107.8 179 41.3
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 8.9e-22 107.8 196 41.3
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 8.9e-22 107.8 192 40.6
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 2.6e-21 106.3 151 47.7
C08p42300 Brassica napus HOM05D003644 ORTHO05D004305 3.4e-21 105.9 179 41.3
BolC8t51790H Brassica oleracea HOM05D003644 ORTHO05D004305 3.4e-21 105.9 179 41.3
BcaC07g41224 Brassica carinata HOM05D003644 ORTHO05D004305 4.4e-21 105.5 178 38.8
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 5.8e-21 105.1 191 41.4
Carub.0007s1180 Capsella rubella HOM05D003644 ORTHO05D004305 7.5e-21 104.8 182 40.1
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 1.3e-20 104.0 202 41.6
Thhalv10002311m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 1.3e-20 104.0 172 39.5
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 2.2e-20 103.2 189 43.4
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 6.4e-20 101.7 194 42.8
AT4G28840 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 1.4e-19 100.5 183 41.5
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 1.4e-19 100.5 203 42.4
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 1.4e-19 100.5 205 40.5
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.4e-19 99.8 191 40.3
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 3.2e-19 99.4 197 40.1
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 4.1e-19 99.0 197 40.1
Sp3g33380 Schrenkiella parvula HOM05D003644 ORTHO05D004305 1.2e-18 97.4 175 40.0
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 1.0e-17 94.4 204 38.7
AL3G48010 Arabidopsis lyrata HOM05D003644 ORTHO05D004305 1.3e-17 94.0 169 37.9
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 1.3e-17 94.0 221 38.0
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 1.7e-17 93.6 181 41.4
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 1.7e-17 93.6 206 42.2
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 2.3e-17 93.2 202 40.1
Sabra18G0072500 Salix brachista HOM05D003644 ORTHO05D004305 2.3e-17 93.2 219 36.1
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 3.0e-17 92.8 205 39.5
Sp7g26840 Schrenkiella parvula HOM05D003644 ORTHO05D004305 3.9e-17 92.4 164 39.6
PSO566G0277 Papaver somniferum HOM05D003644 ORTHO05D004305 8.6e-17 91.3 211 37.4
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 8.6e-17 91.3 206 38.3
Atru.chr7.1390 Acer truncatum HOM05D003644 ORTHO05D004305 1.1e-16 90.9 164 40.9
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.5e-16 90.5 194 38.7
BcaC06g32601 Brassica carinata HOM05D003644 ORTHO05D004305 3.3e-16 89.4 185 37.3
DCAR_012057 Daucus carota HOM05D003644 ORTHO05D004305 3.3e-16 89.4 202 37.6
CARHR110580 Cardamine hirsuta HOM05D003644 ORTHO05D004305 4.3e-16 89.0 168 33.9
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 7.3e-16 88.2 171 36.8
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 9.5e-16 87.8 201 39.3
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 9.5e-16 87.8 211 37.0
MSTRG.19571 Avicennia marina HOM05D003644 ORTHO05D004305 3.6e-15 85.9 203 37.4
Aa31LG8G17030 Aethionema arabicum HOM05D003644 ORTHO05D004305 6.2e-15 85.1 131 41.2
BolC7t46126H Brassica oleracea HOM05D003644 ORTHO05D004305 8.1e-15 84.7 185 37.3
A03p58450 Brassica napus HOM05D003644 ORTHO05D004305 1.1e-14 84.3 185 37.3
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 1.8e-14 83.6 200 37.5
C07p56470 Brassica napus HOM05D003644 ORTHO05D004305 2.3e-14 83.2 185 36.8
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.3e-14 83.2 211 37.4
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 4.0e-14 82.4 211 36.5
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 4.0e-14 82.4 201 39.8
BcaNung04091 Brassica carinata HOM05D003644 ORTHO05D004305 5.2e-14 82.0 127 38.6
Gorai.009G026800 Gossypium raimondii HOM05D003644 ORTHO05D004305 5.2e-14 82.0 220 36.4
BcaNung01359 Brassica carinata HOM05D003644 ORTHO05D004305 1.2e-13 80.9 186 35.5
MD02G1057600 Malus domestica HOM05D003644 ORTHO05D004305 1.5e-13 80.5 204 36.3
Prupe.7G225200 Prunus persica HOM05D003644 ORTHO05D004305 1.5e-13 80.5 213 34.3
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 2.0e-13 80.1 207 35.3
BcaB08g34898 Brassica carinata HOM05D003644 ORTHO05D004305 3.4e-13 79.3 137 40.1
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 3.4e-13 79.3 194 38.1
A01p09070 Brassica napus HOM05D003644 ORTHO05D004305 4.4e-13 79.0 186 36.6
C01p10620 Brassica napus HOM05D003644 ORTHO05D004305 4.4e-13 79.0 186 36.6
BraA01t00855Z Brassica rapa HOM05D003644 ORTHO05D004305 4.4e-13 79.0 186 36.6
Oeu002262.2 Olea europaea HOM05D003644 ORTHO05D004305 4.4e-13 79.0 105 53.3
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 5.8e-13 78.6 196 40.3
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 5.8e-13 78.6 194 37.6
C09p15050 Brassica napus HOM05D003644 ORTHO05D004305 7.6e-13 78.2 134 34.3
FAN19G0617 Fragaria x ananassa HOM05D003644 ORTHO05D004305 7.6e-13 78.2 210 38.1
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 1.3e-12 77.4 194 35.6
BolC7t40541H Brassica oleracea HOM05D003644 ORTHO05D004305 1.7e-12 77.0 180 33.9
BcaC07g41225 Brassica carinata HOM05D003644 ORTHO05D004305 2.2e-12 76.6 137 40.9
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 2.2e-12 76.6 192 35.9
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 2.9e-12 76.3 165 38.2
Hund26238 Selenicereus undatus HOM05D003644 ORTHO05D004305 3.7e-12 75.9 197 38.1
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 4.9e-12 75.5 206 35.0
Migut.K00491 Erythranthe guttata HOM05D003644 ORTHO05D004305 4.9e-12 75.5 163 39.3
Lalb_Chr16g0388081 Lupinus albus HOM05D003644 ORTHO05D004305 4.9e-12 75.5 109 48.6
FvH4_1g05660 Fragaria vesca HOM05D003644 ORTHO05D004305 8.4e-12 74.7 210 37.6
Aa31LG2G21540 Aethionema arabicum HOM05D003644 ORTHO05D004305 1.1e-11 74.3 141 39.0
BcaC09g51666 Brassica carinata HOM05D003644 ORTHO05D004305 1.1e-11 74.3 186 35.5
BolC1t01024H Brassica oleracea HOM05D003644 ORTHO05D004305 1.1e-11 74.3 186 35.5
CsaV3_1G021830 Cucumis sativus L. HOM05D003644 ORTHO05D004305 1.4e-11 73.9 201 35.8
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 1.4e-11 73.9 195 38.5
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 1.4e-11 73.9 206 36.4
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 1.9e-11 73.6 192 37.0
A07p00580 Brassica napus HOM05D003644 ORTHO05D004305 3.2e-11 72.8 170 34.7
Carub.0003s3436 Capsella rubella HOM05D003644 ORTHO05D004305 3.2e-11 72.8 129 36.4
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 3.2e-11 72.8 202 39.1
Thhalv10026355m.g Eutrema salsugineum HOM05D003644 ORTHO05D004305 3.2e-11 72.8 180 35.6
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 3.2e-11 72.8 191 36.6
PGR142G1369 Punica granatum HOM05D003644 ORTHO05D004305 3.2e-11 72.8 209 33.5
A09p12690 Brassica napus HOM05D003644 ORTHO05D004305 4.1e-11 72.4 132 37.1
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 4.1e-11 72.4 209 34.9
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 4.1e-11 72.4 204 35.8
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 4.1e-11 72.4 206 35.4
ECA234G2378 Erigeron canadensis HOM05D003644 ORTHO05D004305 4.1e-11 72.4 201 34.3
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 4.1e-11 72.4 194 36.1
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 5.4e-11 72.0 169 34.3
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 5.4e-11 72.0 171 36.8
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 5.4e-11 72.0 212 32.5
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 7.1e-11 71.6 190 37.9
BcaB03g16807 Brassica carinata HOM05D003644 ORTHO05D004305 9.2e-11 71.2 170 34.7
FAN26G3023 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.2e-10 70.9 211 36.5
FAN28G1311 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.2e-10 70.9 221 35.7
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 1.6e-10 70.5 192 34.4
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 2.1e-10 70.1 218 37.2
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 2.1e-10 70.1 198 33.8
FAN26G0903 Fragaria x ananassa HOM05D003644 ORTHO05D004305 2.7e-10 69.7 212 35.8
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 2.7e-10 69.7 173 34.7
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 4.6e-10 68.9 194 32.0
MELO3C024703.2 Cucumis melo HOM05D003644 ORTHO05D004305 6.0e-10 68.6 205 33.2
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 6.0e-10 68.6 206 38.3
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 7.8e-10 68.2 203 36.0
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 7.8e-10 68.2 206 38.3
Lj2g0017641 Lotus japonicus HOM05D003644 ORTHO05D004305 1.0e-09 67.8 209 36.4
Actinidia32668 Actinidia chinensis HOM05D003644 ORTHO05D004305 1.3e-09 67.4 139 34.5
FAN23G2152 Fragaria x ananassa HOM05D003644 ORTHO05D004305 1.3e-09 67.4 220 35.0
BcaC04g22808 Brassica carinata HOM05D003644 ORTHO05D004305 1.7e-09 67.0 131 32.8
BolC9t54408H Brassica oleracea HOM05D003644 ORTHO05D004305 1.7e-09 67.0 131 32.8
Lsat_1_v5_gn_8_96040 Lactuca sativa HOM05D003644 ORTHO05D004305 1.7e-09 67.0 153 38.6
MD15G1192000 Malus domestica HOM05D003644 ORTHO05D004305 3.0e-09 66.2 209 35.4
Actinidia09436 Actinidia chinensis HOM05D003644 ORTHO05D004305 3.9e-09 65.9 198 35.4
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 5.1e-09 65.5 210 35.7
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 5.1e-09 65.5 203 35.5
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 5.1e-09 65.5 182 37.4
BraA07t27854Z Brassica rapa HOM05D003644 ORTHO05D004305 2.5e-08 63.2 86 41.9
RcHm_v2.0_Chr2g0091291 Rosa chinensis HOM05D003644 ORTHO05D004305 4.3e-08 62.4 171 37.4
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 5.6e-08 62.0 191 36.1
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 7.3e-08 61.6 178 33.7
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 7.3e-08 61.6 193 33.7
Os05g0559316 Oryza sativa ssp. japonica HOM05D003644 ORTHO05D004305 9.6e-08 61.2 88 47.7
COL.COLO4_17464 Corchorus olitorius HOM05D003644 ORTHO05D004305 3.6e-07 59.3 170 34.1
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 3.6e-07 59.3 193 35.2
HPP92_019983 Vanilla planifolia HOM05D003644 ORTHO05D004305 3.6e-07 59.3 184 35.3
TPR.G23503 Trifolium pratense HOM05D003644 ORTHO05D004305 4.7e-07 58.9 155 34.2
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 6.2e-07 58.5 185 31.9
arahy.Tifrunner.gnm1.ann1.X7P2RE Arachis hypogaea HOM05D003644 ORTHO05D004305 1.1e-06 57.8 122 42.6
BcaC06g36690 Brassica carinata HOM05D003644 ORTHO05D004305 1.1e-06 57.8 98 38.8
C07p01040 Brassica napus HOM05D003644 ORTHO05D004305 1.1e-06 57.8 178 32.0
Sed0028016 Sechium edule HOM05D003644 ORTHO05D004305 5.2e-06 55.5 199 31.2
BraA09t36915Z Brassica rapa HOM05D003644 ORTHO05D004305 6.8e-06 55.1 39 66.7
PGR102G0050 Punica granatum HOM05D003644 ORTHO05D004305 8.9e-06 54.7 177 35.0


User provided reference genes

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