Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 1.8e-159 565.8 276 100.0
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 2.2e-93 346.3 278 61.2
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 4.9e-93 345.1 281 61.9
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 7.8e-91 337.8 283 58.7
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 4.7e-88 328.6 288 58.7
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 1.1e-87 327.4 288 58.3
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 2.2e-85 319.7 282 58.9
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 2.9e-85 319.3 272 56.2
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 3.2e-84 315.8 268 59.3
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 6.0e-83 311.6 257 54.9
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 1.7e-82 310.1 268 57.1
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 2.3e-82 309.7 270 57.0
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 6.6e-82 308.1 263 57.8
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 1.9e-81 306.6 271 56.5
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 3.3e-81 305.8 270 55.6
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 4.3e-81 305.4 267 57.3
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 9.6e-81 304.3 266 55.6
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 1.6e-80 303.5 266 56.4
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 1.6e-80 303.5 266 57.1
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 1.6e-80 303.5 285 51.9
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 1.6e-80 303.5 283 54.1
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 4.7e-80 302.0 268 56.7
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 8.1e-80 301.2 269 56.1
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 8.1e-80 301.2 287 54.7
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 8.1e-80 301.2 279 54.5
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 1.4e-79 300.4 267 55.1
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.4e-79 300.4 286 54.9
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 1.8e-79 300.1 278 54.3
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 3.1e-79 299.3 279 53.8
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 4.0e-79 298.9 269 58.4
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 4.0e-79 298.9 260 55.8
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 5.2e-79 298.5 285 53.0
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 2.0e-78 296.6 287 54.7
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 3.4e-78 295.8 261 58.2
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 3.4e-78 295.8 286 53.8
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 4.4e-78 295.4 285 52.6
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 5.8e-78 295.0 293 53.6
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 7.6e-78 294.7 275 54.2
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 9.9e-78 294.3 260 55.8
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 9.9e-78 294.3 260 55.8
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 2.9e-77 292.7 283 51.9
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 3.8e-77 292.4 275 53.8
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 6.4e-77 291.6 293 50.5
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 6.4e-77 291.6 275 53.5
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 8.4e-77 291.2 275 51.3
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.1e-76 290.8 270 53.3
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 1.4e-76 290.4 260 55.0
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 1.4e-76 290.4 272 53.7
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 1.9e-76 290.0 259 54.1
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 4.2e-76 288.9 269 53.5
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 7.1e-76 288.1 259 55.2
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 9.3e-76 287.7 278 53.2
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 1.6e-75 287.0 271 52.4
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 2.1e-75 286.6 268 53.4
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 2.7e-75 286.2 305 49.5
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 3.5e-75 285.8 280 51.4
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 3.5e-75 285.8 262 51.9
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 4.6e-75 285.4 258 55.0
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 4.6e-75 285.4 258 55.0
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 6.0e-75 285.0 276 49.3
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 7.8e-75 284.6 273 52.4
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 1.3e-74 283.9 260 54.6
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 2.3e-74 283.1 258 54.7
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 2.3e-74 283.1 258 54.7
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 2.3e-74 283.1 285 51.6
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 2.3e-74 283.1 271 53.5
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 5.1e-74 282.0 258 54.7
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 5.1e-74 282.0 266 55.3
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 1.1e-73 280.8 259 53.7
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 1.1e-73 280.8 271 53.1
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 1.5e-73 280.4 265 50.6
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 1.9e-73 280.0 257 53.7
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 3.3e-73 279.3 269 52.4
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 5.6e-73 278.5 277 50.2
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 2.1e-72 276.6 253 52.2
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 4.8e-72 275.4 292 48.3
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 6.2e-72 275.0 271 51.3
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 1.8e-71 273.5 264 53.0
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 3.1e-71 272.7 271 52.0
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 1.3e-69 267.3 288 47.2
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 1.7e-69 266.9 288 47.2
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 2.9e-69 266.2 285 47.0
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 4.9e-69 265.4 274 52.6
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 6.4e-69 265.0 247 52.6
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 6.4e-69 265.0 275 50.2
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 8.4e-69 264.6 246 54.5
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 1.0e-66 257.7 269 49.4
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 1.8e-66 256.9 257 53.7
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 3.9e-66 255.8 213 57.3
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 6.7e-66 255.0 277 49.5
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 2.5e-65 253.1 247 50.2
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 5.6e-65 251.9 276 45.7
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 7.4e-65 251.5 302 46.0
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 1.6e-64 250.4 283 47.3
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 2.1e-64 250.0 258 48.8
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 2.4e-63 246.5 242 52.9
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 2.6e-62 243.0 246 51.2
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 1.3e-61 240.7 260 46.2
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 1.3e-61 240.7 253 48.2
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 1.4e-60 237.3 346 40.2
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 1.9e-60 236.9 298 46.0
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 7.1e-60 235.0 223 52.0
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 2.7e-59 233.0 263 46.0
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 2.7e-59 233.0 273 42.5
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 3.5e-59 232.6 275 42.5
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 2.3e-58 229.9 262 46.2
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 9.6e-57 224.6 272 47.4
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 1.7e-53 213.8 253 43.9
ATR0315G075 Amborella trichopoda HOM05D004971 ORTHO05D006289 3.8e-53 212.6 204 53.4
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 6.0e-51 205.3 288 39.9
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 9.0e-47 191.4 273 39.9
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 1.5e-46 190.7 197 52.8
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 2.0e-46 190.3 193 51.3
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 3.4e-46 189.5 213 46.9
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 3.4e-46 189.5 213 46.5
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 3.4e-46 189.5 213 46.9
CDE05G3470 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 4.5e-46 189.1 123 69.9
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 5.9e-46 188.7 213 46.5
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.0e-42 177.9 248 41.5
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 3.9e-42 176.0 243 38.3
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 1.4e-39 167.5 292 34.9
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 1.8e-39 167.2 206 42.2
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 1.3e-37 161.0 428 28.0
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 7.9e-35 151.8 351 31.6
EL10Ac8g18422 Beta vulgaris HOM05D004971 ORTHO05D006289 8.8e-34 148.3 145 52.4
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 2.2e-32 143.7 155 47.7
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 2.2e-29 133.7 386 26.4
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 9.4e-28 128.3 170 40.6
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 2.0e-25 120.6 333 27.9
Lj4g0009518 Lotus japonicus HOM05D004971 ORTHO05D006289 3.1e-23 113.2 76 64.5
MBI19_g24589_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 4.1e-23 112.8 188 38.3
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 2.6e-22 110.2 70 72.9
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 5.0e-21 105.9 148 40.5
MBI19_g42779_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 1.6e-19 100.9 166 38.0
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 3.6e-19 99.8 135 42.2
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 3.6e-19 99.8 155 38.1
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 1.4e-18 97.8 150 37.3
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 2.6e-17 93.6 56 69.6
Nitab4.5_0002165g0090 Nicotiana tabacum HOM05D004971 ORTHO05D006289 9.7e-17 91.7 57 63.2
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 1.2e-14 84.7 167 37.1
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 3.8e-13 79.7 56 60.7
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.6e-09 67.0 66 47.0
FvH4_7g02480 Fragaria vesca HOM05D004971 ORTHO05D022553 4.4e-09 66.2 38 73.7
FvH4_7g02600 Fragaria vesca HOM05D004971 ORTHO05D022553 4.4e-09 66.2 38 73.7
MBI19_g24592_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 1.2e-06 58.2 38 57.9


User provided reference genes

Program Settings