Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01497 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 3.7e-106 388.3 204 100.0
Aqoxy1G01499 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 1.8e-20 103.6 152 40.8
Solyc12g007300.1 Solanum lycopersicum HOM05D002733 ORTHO05D003856 1.0e-18 97.8 128 43.8
Sopen12g003260 Solanum pennellii HOM05D002733 ORTHO05D003856 1.0e-18 97.8 128 43.8
PGSC0003DMG400000368 Solanum tuberosum HOM05D002733 ORTHO05D003856 1.3e-18 97.4 128 43.8
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 1.7e-18 97.1 127 41.7
Hma1.2p1_1080F.1_g255020 Hydrangea macrophylla HOM05D002733 ORTHO05D003856 3.8e-18 95.9 136 42.6
FAN19G2118 Fragaria x ananassa HOM05D002733 ORTHO05D003856 5.0e-18 95.5 126 42.1
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 5.0e-18 95.5 127 40.9
FAN23G1485 Fragaria x ananassa HOM05D002733 ORTHO05D003856 6.5e-18 95.1 126 41.3
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 6.5e-18 95.1 142 38.0
Sabra16G0260100 Salix brachista HOM05D002733 ORTHO05D003856 6.5e-18 95.1 131 41.2
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 1.1e-17 94.4 136 38.2
MELO3C004101.2 Cucumis melo HOM05D002733 ORTHO05D003856 1.5e-17 94.0 126 38.9
Cfa009897 Carpinus fangiana HOM05D002733 ORTHO05D003856 2.5e-17 93.2 136 38.2
CiPaw.03G015000 Carya illinoinensis HOM05D002733 ORTHO05D003856 2.5e-17 93.2 130 41.5
Cfa016244 Carpinus fangiana HOM05D002733 ORTHO05D003856 3.2e-17 92.8 158 36.7
Ciclev10010395m.g Citrus clementina HOM05D002733 ORTHO05D003856 3.2e-17 92.8 132 40.2
FAN23G1126 Fragaria x ananassa HOM05D002733 ORTHO05D003856 3.2e-17 92.8 131 38.2
FvH4_1g24261 Fragaria vesca HOM05D002733 ORTHO05D003856 4.2e-17 92.4 131 38.2
FAN26G1179 Fragaria x ananassa HOM05D002733 ORTHO05D003856 4.2e-17 92.4 131 38.2
Thecc.07G171000 Theobroma cacao HOM05D002733 ORTHO05D003856 4.2e-17 92.4 131 40.5
Thecc.09G104200 Theobroma cacao HOM05D002733 ORTHO05D003856 4.2e-17 92.4 127 44.1
CiPaw.03G015300 Carya illinoinensis HOM05D002733 ORTHO05D003856 7.2e-17 91.7 131 40.5
FAN28G1642 Fragaria x ananassa HOM05D000949 ORTHO05D001276 7.2e-17 91.7 131 38.2
CAN.G1774.3 Capsicum annuum HOM05D002733 ORTHO05D003856 9.4e-17 91.3 131 42.7
Glyma.04G133200 Glycine max HOM05D002733 ORTHO05D003856 9.4e-17 91.3 157 35.0
CiPaw.03G014700 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.2e-16 90.9 130 40.8
Haze_00196 Corylus avellana HOM05D002733 ORTHO05D003856 1.6e-16 90.5 131 38.9
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 2.7e-16 89.7 127 41.7
FvH4_1g16231 Fragaria vesca HOM05D002733 ORTHO05D003856 3.6e-16 89.4 130 40.8
Peaxi162Scf00023g00136 Petunia axillaris HOM05D002733 ORTHO05D003856 6.1e-16 88.6 169 36.1
Duzib168G2229 Durio zibethinus HOM05D002733 ORTHO05D003856 1.4e-15 87.4 127 41.7
RcHm_v2.0_Chr7g0192641 Rosa chinensis HOM05D002733 ORTHO05D003856 1.8e-15 87.0 126 39.7
Prupe.7G223800 Prunus persica HOM05D002733 ORTHO05D003856 2.3e-15 86.7 136 40.4
Prupe.7G223900 Prunus persica HOM05D002733 ORTHO05D003856 2.3e-15 86.7 136 41.2
RcHm_v2.0_Chr2g0120751 Rosa chinensis HOM05D002733 ORTHO05D003856 2.3e-15 86.7 126 38.9
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 3.0e-15 86.3 129 36.4
Medtr3g013920 Medicago truncatula HOM05D002733 ORTHO05D003856 3.0e-15 86.3 117 41.9
Cpa.g.sc81.85 Carica papaya HOM05D002733 ORTHO05D003856 5.2e-15 85.5 126 37.3
TPR.G8024 Trifolium pratense HOM05D002733 ORTHO05D003856 5.2e-15 85.5 111 42.3
COL.COLO4_34789 Corchorus olitorius HOM05D002733 ORTHO05D003856 6.7e-15 85.1 126 39.7
Medtr3g013810 Medicago truncatula HOM05D002733 ORTHO05D003856 6.7e-15 85.1 117 41.9
Haze_00197 Corylus avellana HOM05D002733 ORTHO05D003856 8.8e-15 84.7 163 35.0
Medtr3g013900 Medicago truncatula HOM05D002733 ORTHO05D003856 8.8e-15 84.7 117 41.9
DCAR_028226 Daucus carota HOM05D002733 ORTHO05D003856 1.2e-14 84.3 148 33.1
MD00G1107900 Malus domestica HOM05D002733 ORTHO05D003856 1.2e-14 84.3 126 41.3
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 1.5e-14 84.0 127 38.6
FvH4_5g06160 Fragaria vesca HOM05D002733 ORTHO05D003856 2.0e-14 83.6 126 40.5
FAN13G0375 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.0e-14 83.6 126 40.5
Medtr0267s0030 Medicago truncatula HOM05D002733 ORTHO05D003856 2.6e-14 83.2 117 41.0
FAN18G0094 Fragaria x ananassa HOM05D002733 ORTHO05D003856 3.3e-14 82.8 126 40.5
Medtr3g013820 Medicago truncatula HOM05D002733 ORTHO05D003856 3.3e-14 82.8 117 41.0
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 4.4e-14 82.4 138 36.2
TPR.G12039 Trifolium pratense HOM05D002733 ORTHO05D003856 4.4e-14 82.4 112 38.4
Cfa016245 Carpinus fangiana HOM05D002733 ORTHO05D003856 5.7e-14 82.0 151 35.1
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 7.5e-14 81.6 136 36.8
MD15G1316300 Malus domestica HOM05D002733 ORTHO05D003856 1.7e-13 80.5 126 38.1
Ciclev10007038m.g Citrus clementina HOM05D002733 ORTHO05D003856 3.7e-13 79.3 131 37.4
TPR.G1395 Trifolium pratense HOM05D002733 ORTHO05D003856 3.7e-13 79.3 113 36.3
Carub.0003s2754 Capsella rubella HOM05D002733 ORTHO05D003856 4.8e-13 79.0 130 36.2
Sed0017653 Sechium edule HOM05D002733 ORTHO05D003856 4.8e-13 79.0 126 34.1
VMungo1080G0152 Vigna mungo HOM05D002733 ORTHO05D003856 4.8e-13 79.0 112 41.1
Prupe.7G224100 Prunus persica HOM05D002733 ORTHO05D003856 8.2e-13 78.2 130 33.8
MD02G1059300 Malus domestica HOM05D002733 ORTHO05D003856 1.1e-12 77.8 127 36.2
BcaC02g12127 Brassica carinata HOM05D002733 ORTHO05D003856 1.4e-12 77.4 120 38.3
A05p06330 Brassica napus HOM05D002733 ORTHO05D003856 1.4e-12 77.4 120 38.3
C04p07280 Brassica napus HOM05D002733 ORTHO05D003856 1.4e-12 77.4 120 38.3
BolC4t22351H Brassica oleracea HOM05D002733 ORTHO05D003856 1.4e-12 77.4 120 38.3
Aa31LG8G11380 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.8e-12 77.0 151 36.4
Nitab4.5_0000316g0140 Nicotiana tabacum HOM05D002733 ORTHO05D003856 1.8e-12 77.0 150 34.7
VMungo1080G0686 Vigna mungo HOM05D002733 ORTHO05D003856 1.8e-12 77.0 155 33.5
Carub.0004s2232 Capsella rubella HOM05D002733 ORTHO05D003856 2.4e-12 76.6 123 36.6
Sed0022151 Sechium edule HOM05D002733 ORTHO05D003856 2.4e-12 76.6 128 35.2
Actinidia20408 Actinidia chinensis HOM05D002733 ORTHO05D003856 3.1e-12 76.3 128 38.3
Nitab4.5_0001888g0040 Nicotiana tabacum HOM05D002733 ORTHO05D003856 5.3e-12 75.5 150 34.7
Aa31LG8G17200 Aethionema arabicum HOM05D002733 ORTHO05D003856 7.0e-12 75.1 152 33.6
Lj3g0006952 Lotus japonicus HOM05D002733 ORTHO05D003856 7.0e-12 75.1 126 37.3
Peaxi162Scf00665g00148 Petunia axillaris HOM05D002733 ORTHO05D003856 7.0e-12 75.1 163 32.5
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 7.0e-12 75.1 131 36.6
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 9.1e-12 74.7 131 36.6
Sed0027145 Sechium edule HOM05D002733 ORTHO05D003856 1.2e-11 74.3 123 35.8
Aa31LG7G1520 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.0e-11 73.6 120 34.2
Prupe.7G224000 Prunus persica HOM05D002733 ORTHO05D003856 2.0e-11 73.6 126 37.3
Aa31LG8G17220 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.7e-11 73.2 199 28.6
BraA05t19601Z Brassica rapa HOM05D002733 ORTHO05D003856 2.7e-11 73.2 120 36.7
Aa31LG8G17140 Aethionema arabicum HOM05D002733 ORTHO05D003856 7.7e-11 71.6 152 33.6
Actinidia09441 Actinidia chinensis HOM05D002733 ORTHO05D003856 1.0e-10 71.2 134 32.1
DCAR_014131 Daucus carota HOM05D002733 ORTHO05D003856 1.0e-10 71.2 177 29.4
DCAR_003268 Daucus carota HOM05D002733 ORTHO05D003856 1.3e-10 70.9 108 38.9
Aa31LG7G1530 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.7e-10 70.5 154 29.9
Aqoxy1G01498 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 2.9e-10 69.7 159 34.0
AL7G49890 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 2.9e-10 69.7 120 34.2
AT4G03170 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 2.9e-10 69.7 118 36.4
BcaC02g07356 Brassica carinata HOM05D002733 ORTHO05D003856 6.5e-10 68.6 128 35.2
BolC4t28286H Brassica oleracea HOM05D002733 ORTHO05D003856 8.5e-10 68.2 128 35.2
Aa31LG8G17160 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.5e-09 67.4 132 31.8
Aa31LG7G1600 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.2e-09 65.9 159 32.1
Aa31LG8G17150 Aethionema arabicum HOM05D002733 ORTHO05D003856 4.2e-09 65.9 142 35.2
Peaxi162Scf00665g00126 Petunia axillaris HOM05D002733 ORTHO05D003856 4.2e-09 65.9 106 35.8
PSO566G0305 Papaver somniferum HOM05D002733 ORTHO05D003856 5.5e-09 65.5 108 38.9
THA.LOC104810048 Tarenaya hassleriana HOM05D002733 ORTHO05D003856 7.2e-09 65.1 142 31.0
PSO782G1409 Papaver somniferum HOM05D002733 ORTHO05D003856 9.4e-09 64.7 106 38.7
QL01p018935 Quercus lobata HOM05D002733 ORTHO05D003856 1.2e-08 64.3 134 32.1
Aa31LG6G10180 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.7e-08 63.2 139 30.2
Aa31LG7G1590 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.7e-08 63.2 153 30.7
Sp4g22050 Schrenkiella parvula HOM05D002733 ORTHO05D003856 2.7e-08 63.2 124 34.7
Eucgr.C01014 Eucalyptus grandis HOM05D002733 ORTHO05D003856 3.6e-08 62.8 146 33.6
ATR0594G191 Amborella trichopoda HOM05D020218 ORTHO05D013427 8.8e-07 58.2 117 33.3
Phvul.005G028900 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 8.8e-07 58.2 131 29.0
AT4G03160 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 2.0e-06 57.0 109 33.0
COL.COLO4_32232 Corchorus olitorius HOM05D002733 ORTHO05D003856 2.0e-06 57.0 108 36.1
Sabra08G0161200 Salix brachista HOM05D002733 ORTHO05D003856 2.6e-06 56.6 101 37.6
CsaV3_2G029240 Cucumis sativus L. HOM05D000896 ORTHO05D000594 4.4e-06 55.8 116 34.5
Aa31LG7G1510 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.7e-06 55.5 114 34.2
QL01p018939 Quercus lobata HOM05D002733 ORTHO05D003856 5.7e-06 55.5 135 28.1


User provided reference genes

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