Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01422 Aquilegia oxysepala HOM05D015194 ORTHO05D001155 2.9e-139 498.4 231 100.0
Aqoxy7G00772 Aquilegia oxysepala HOM05D008706 ORTHO05D010440 2.3e-35 153.3 214 40.7
Aqoxy1G00049 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 1.9e-18 97.1 242 30.2
Actinidia26989 Actinidia chinensis HOM05D007779 ORTHO05D010440 4.0e-16 89.4 165 35.8
Aqoxy7G00776 Aquilegia oxysepala HOM05D008706 ORTHO05D010440 4.0e-16 89.4 111 43.2
Gorai.006G112800 Gossypium raimondii HOM05D001729 ORTHO05D001155 4.0e-16 89.4 215 30.2
Aqoxy3G00170 Aquilegia oxysepala HOM05D015194 ORTHO05D009863 5.3e-16 89.0 233 30.5
Aqoxy7G01734 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 1.5e-15 87.4 232 28.9
Gohir.D09G096101 Gossypium hirsutum HOM05D001729 ORTHO05D001155 2.0e-15 87.0 198 30.3
Aqoxy7G01704 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 3.4e-15 86.3 232 28.4
PSO675G7142 Papaver somniferum HOM05D008326 ORTHO05D001155 1.3e-14 84.3 187 29.9
Gohir.A09G096401 Gossypium hirsutum HOM05D001729 ORTHO05D001155 6.5e-14 82.0 198 29.3
PSO210G4092 Papaver somniferum HOM05D008326 ORTHO05D001155 1.9e-13 80.5 174 33.3
Duzib170G0599 Durio zibethinus HOM05D001729 ORTHO05D001155 4.2e-13 79.3 205 26.8
Oeu016027.1 Olea europaea HOM05D007779 ORTHO05D009863 4.2e-13 79.3 158 32.9
PSO161G0051 Papaver somniferum HOM05D008326 ORTHO05D001155 4.2e-13 79.3 148 33.8
PSO339G1193 Papaver somniferum HOM05D008326 ORTHO05D001155 5.5e-13 79.0 171 29.2
PSO063G7655 Papaver somniferum HOM05D008326 ORTHO05D001155 9.3e-13 78.2 186 31.2
PSO210G5868 Papaver somniferum HOM05D008326 ORTHO05D001155 9.3e-13 78.2 130 33.1
PSO170G0677 Papaver somniferum HOM05D008326 ORTHO05D001155 2.1e-12 77.0 207 30.4
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 4.6e-12 75.9 160 28.1
PSO801G0801 Papaver somniferum HOM05D008326 ORTHO05D001155 6.0e-12 75.5 171 28.7
PSO063G7563 Papaver somniferum HOM05D008326 ORTHO05D001155 7.9e-12 75.1 131 32.8
PSO407G0006 Papaver somniferum HOM05D008326 ORTHO05D001155 7.9e-12 75.1 154 30.5
PSO541G4811 Papaver somniferum HOM05D008326 ORTHO05D001155 7.9e-12 75.1 159 32.7
PSO063G5476 Papaver somniferum HOM05D008326 ORTHO05D001155 1.3e-11 74.3 151 31.1
PSO782G1123 Papaver somniferum HOM05D008326 ORTHO05D001155 2.3e-11 73.6 131 34.4
PSO782G2276 Papaver somniferum HOM05D008326 ORTHO05D001155 2.3e-11 73.6 150 31.3
PSO063G7044 Papaver somniferum HOM05D008326 ORTHO05D001155 3.9e-11 72.8 150 29.3
PSO210G7271 Papaver somniferum HOM05D008326 ORTHO05D001155 6.7e-11 72.0 139 35.3
PSO173G0013 Papaver somniferum HOM05D008326 ORTHO05D001155 8.7e-11 71.6 160 32.5
Lsat_1_v5_gn_4_180620 Lactuca sativa HOM05D008898 ORTHO05D001155 1.5e-10 70.9 158 27.2
Prupe.6G075500 Prunus persica HOM05D001729 ORTHO05D001155 1.5e-10 70.9 167 27.5
Sabra15G0014700 Salix brachista HOM05D001729 ORTHO05D001155 2.5e-10 70.1 191 30.4
Lj2A946T25 Lonicera japonica HOM05D001729 ORTHO05D001155 5.7e-10 68.9 165 29.1
RcHm_v2.0_Chr3g0450231 Rosa chinensis HOM05D007779 ORTHO05D009863 5.7e-10 68.9 154 33.8
FAN14G0926 Fragaria x ananassa HOM05D007779 ORTHO05D009863 7.4e-10 68.6 155 32.3
FAN14G4661 Fragaria x ananassa HOM05D007779 ORTHO05D009863 7.4e-10 68.6 155 32.3
PSO384G0013 Papaver somniferum HOM05D008326 ORTHO05D001155 7.4e-10 68.6 152 28.3
PSO210G3857 Papaver somniferum HOM05D008326 ORTHO05D001155 9.7e-10 68.2 136 30.9
Lsat_1_v5_gn_5_38300 Lactuca sativa HOM05D008898 ORTHO05D001155 1.3e-09 67.8 154 30.5
A07p08150 Brassica napus HOM05D002743 ORTHO05D002895 2.2e-09 67.0 151 28.5
BraA07t28599Z Brassica rapa HOM05D002743 ORTHO05D002895 2.2e-09 67.0 151 28.5
Os01g0578800 Oryza sativa ssp. japonica HOM05D008898 ORTHO05D001155 2.2e-09 67.0 189 28.6
PSO333G0040 Papaver somniferum HOM05D008326 ORTHO05D001155 2.2e-09 67.0 192 28.1
FAN05G4719 Fragaria x ananassa HOM05D007779 ORTHO05D009863 2.8e-09 66.6 154 31.2
FAN05G5524 Fragaria x ananassa HOM05D007779 ORTHO05D009863 2.8e-09 66.6 154 31.2
FAN21G0135 Fragaria x ananassa HOM05D005271 ORTHO05D006072 2.8e-09 66.6 172 27.3
HanXRQChr15g0474331 Helianthus annuus HOM05D008898 ORTHO05D001155 2.8e-09 66.6 165 29.1
BolC7t41698H Brassica oleracea HOM05D002743 ORTHO05D002895 3.7e-09 66.2 151 27.8
FvH4_6g02440 Fragaria vesca HOM05D007779 ORTHO05D009863 3.7e-09 66.2 155 31.6
FAN02G2389 Fragaria x ananassa HOM05D007779 ORTHO05D009863 3.7e-09 66.2 155 31.6
BcaC06g35666 Brassica carinata HOM05D002743 ORTHO05D002895 4.8e-09 65.9 151 27.8
Migut.F02080 Erythranthe guttata HOM05D007779 ORTHO05D009863 4.8e-09 65.9 208 27.9
HanXRQChr01g0029461 Helianthus annuus HOM05D008898 ORTHO05D001155 4.8e-09 65.9 159 25.8
Oeu054758.1 Olea europaea HOM05D002420 ORTHO05D002422 4.8e-09 65.9 150 28.7
Potri.007G027200 Populus trichocarpa HOM05D002420 ORTHO05D002422 4.8e-09 65.9 242 22.7
Prupe.6G347200 Prunus persica HOM05D007779 ORTHO05D009863 4.8e-09 65.9 154 33.1
Sabra05G0102300 Salix brachista HOM05D002420 ORTHO05D002422 4.8e-09 65.9 181 27.1
FAN09G2319 Fragaria x ananassa HOM05D007779 ORTHO05D009863 8.2e-09 65.1 156 34.0
PSO541G1556 Papaver somniferum HOM05D008326 ORTHO05D001155 8.2e-09 65.1 109 32.1
C07p12300 Brassica napus HOM05D002743 ORTHO05D002895 1.1e-08 64.7 151 27.2
Peaxi162Scf01164g00027 Petunia axillaris HOM05D008706 ORTHO05D010440 1.1e-08 64.7 213 28.6
Rhsim08G0237800 Rhododendron simsii HOM05D001729 ORTHO05D001155 1.1e-08 64.7 169 30.8
Carub.0006s3136 Capsella rubella HOM05D002743 ORTHO05D002895 1.4e-08 64.3 178 29.2
HanXRQChr02g0054011 Helianthus annuus HOM05D002420 ORTHO05D002422 1.4e-08 64.3 166 30.7
HanXRQChr15g0474381 Helianthus annuus HOM05D008898 ORTHO05D001155 1.4e-08 64.3 166 29.5
PSO063G1347 Papaver somniferum HOM05D008326 ORTHO05D001155 1.4e-08 64.3 109 37.6
CAN.G231.32 Capsicum annuum HOM05D000664 ORTHO05D000491 3.1e-08 63.2 164 28.7
FAN11G3238 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.1e-08 63.2 161 28.0
PSO384G2442 Papaver somniferum HOM05D008326 ORTHO05D001155 3.1e-08 63.2 150 30.7
FvH4_6g46240 Fragaria vesca HOM05D001729 ORTHO05D001155 4.1e-08 62.8 153 29.4
FAN02G3911 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.1e-08 62.8 156 28.2
Manes.02G092400 Manihot esculenta HOM05D002420 ORTHO05D002422 4.1e-08 62.8 156 26.9
Potri.005G124500 Populus trichocarpa HOM05D002420 ORTHO05D002422 4.1e-08 62.8 186 25.8
PSO151G0126 Papaver somniferum HOM05D008326 ORTHO05D001155 5.3e-08 62.4 148 29.7
PSO421G0181 Papaver somniferum HOM05D008326 ORTHO05D001155 6.9e-08 62.0 177 29.4
QL05p008000 Quercus lobata HOM05D001729 ORTHO05D001155 6.9e-08 62.0 167 27.5
Oeu007441.1 Olea europaea HOM05D002420 ORTHO05D002422 9.0e-08 61.6 152 28.9
QL06p006111 Quercus lobata HOM05D001729 ORTHO05D001155 9.0e-08 61.6 183 27.3
FAN01G0708 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-07 61.2 161 26.1
CARHR131260 Cardamine hirsuta HOM05D002743 ORTHO05D002895 1.5e-07 60.8 127 36.2
Lsat_1_v5_gn_0_31161 Lactuca sativa HOM05D008898 ORTHO05D001155 1.5e-07 60.8 126 29.4
Prupe.3G246100 Prunus persica HOM05D001729 ORTHO05D001155 1.5e-07 60.8 163 27.0
Prupe.4G053600 Prunus persica HOM05D001729 ORTHO05D001155 1.5e-07 60.8 183 26.8
RcHm_v2.0_Chr7g0221261 Rosa chinensis HOM05D001729 ORTHO05D001155 1.5e-07 60.8 149 26.8
Sp5g25320 Schrenkiella parvula HOM05D002743 ORTHO05D002895 1.5e-07 60.8 118 34.7
FvH4_6g31981 Fragaria vesca HOM05D001729 ORTHO05D001155 2.0e-07 60.5 131 25.2
AL6G13560 Arabidopsis lyrata HOM05D007779 ORTHO05D009863 2.6e-07 60.1 160 28.8
AL6G43580 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 2.6e-07 60.1 149 28.9
FAN14G5781 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.6e-07 60.1 159 27.0
Hma1.2p1_0726F.1_g208920 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 2.6e-07 60.1 174 27.0
PSO210G6463 Papaver somniferum HOM05D001729 ORTHO05D001155 2.6e-07 60.1 108 33.3
CSS0020895 Camellia sinensis var. sinensis HOM05D008898 ORTHO05D001155 3.4e-07 59.7 194 28.4
CSS0028413 Camellia sinensis var. sinensis HOM05D008898 ORTHO05D001155 3.4e-07 59.7 194 28.4
FAN03G3155 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.4e-07 59.7 162 29.0
RcHm_v2.0_Chr6g0291931 Rosa chinensis HOM05D001729 ORTHO05D001155 3.4e-07 59.7 155 28.4
Carub.0006s0291 Capsella rubella HOM05D007779 ORTHO05D009863 4.5e-07 59.3 213 24.9
FvH4_1g13480 Fragaria vesca HOM05D002420 ORTHO05D002422 4.5e-07 59.3 145 22.1
FAN26G2215 Fragaria x ananassa HOM05D002420 ORTHO05D002422 4.5e-07 59.3 145 22.1
Nn8g41006 Nelumbo nucifera HOM05D000664 ORTHO05D000491 4.5e-07 59.3 157 28.0
PSO210G1832 Papaver somniferum HOM05D008326 ORTHO05D001155 4.5e-07 59.3 177 25.4
PSO333G0039 Papaver somniferum HOM05D008326 ORTHO05D001155 4.5e-07 59.3 191 28.3
RcHm_v2.0_Chr5g0018111 Rosa chinensis HOM05D001729 ORTHO05D001155 4.5e-07 59.3 176 31.2
FAN23G2135 Fragaria x ananassa HOM05D002420 ORTHO05D002422 5.9e-07 58.9 145 22.1
Lj2A1107G68 Lonicera japonica HOM05D001729 ORTHO05D001155 5.9e-07 58.9 151 28.5
QL07p036300 Quercus lobata HOM05D001729 ORTHO05D001155 5.9e-07 58.9 137 30.7
Rhsim08G0114200 Rhododendron simsii HOM05D002420 ORTHO05D002422 5.9e-07 58.9 155 31.0
vmacro17847 Vaccinium macrocarpon HOM05D002420 ORTHO05D002422 5.9e-07 58.9 155 31.0
Dinv39969 Davidia involucrata HOM05D002420 ORTHO05D002422 7.7e-07 58.5 155 29.7
PSO210G0402 Papaver somniferum HOM05D008326 ORTHO05D001155 7.7e-07 58.5 104 32.7
Rhsim08G0219900 Rhododendron simsii HOM05D001729 ORTHO05D001155 7.7e-07 58.5 146 32.2
RcHm_v2.0_Chr3g0450211 Rosa chinensis HOM05D001729 ORTHO05D001155 7.7e-07 58.5 137 27.0
BcaB06g26601 Brassica carinata HOM05D002743 ORTHO05D002895 1.0e-06 58.2 152 27.0
QL07p036320 Quercus lobata HOM05D001729 ORTHO05D001155 1.0e-06 58.2 137 29.9
Sabra09G0127200 Salix brachista HOM05D001729 ORTHO05D001155 1.0e-06 58.2 157 26.8
Aqoxy7G01705 Aquilegia oxysepala HOM05D015194 ORTHO05D010440 1.3e-06 57.8 146 30.1
FvH4_6g02171 Fragaria vesca HOM05D001729 ORTHO05D001155 1.3e-06 57.8 135 30.4
Hma1.2p1_0400F.1_g144540 Hydrangea macrophylla HOM05D002420 ORTHO05D002422 1.3e-06 57.8 156 31.4
Hma1.2p1_0432F.1_g152020 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 1.3e-06 57.8 152 29.6
PSO724G0275 Papaver somniferum HOM05D008326 ORTHO05D001155 1.3e-06 57.8 136 31.6
RcHm_v2.0_Chr2g0123691 Rosa chinensis HOM05D001729 ORTHO05D001155 1.7e-06 57.4 141 26.2
RcHm_v2.0_Chr6g0292271 Rosa chinensis HOM05D001729 ORTHO05D001155 1.7e-06 57.4 111 32.4
RcHm_v2.0_Chr2g0101881 Rosa chinensis HOM05D002420 ORTHO05D002422 2.2e-06 57.0 154 30.5
RcHm_v2.0_Chr6g0275871 Rosa chinensis HOM05D001729 ORTHO05D001155 2.2e-06 57.0 138 29.7
VMungo1309G0868 Vigna mungo HOM05D001729 ORTHO05D001155 2.2e-06 57.0 170 27.1
Ciclev10006867m.g Citrus clementina HOM05D000664 ORTHO05D000491 2.9e-06 56.6 161 27.3
Solyc11g069120.1 Solanum lycopersicum HOM05D008706 ORTHO05D010440 2.9e-06 56.6 186 28.0
C09p72880 Brassica napus HOM05D007779 ORTHO05D009863 3.8e-06 56.2 155 25.8
BolC9t60024H Brassica oleracea HOM05D007779 ORTHO05D009863 3.8e-06 56.2 155 25.8
Cpa.g.sc544.2 Carica papaya HOM05D002420 ORTHO05D002422 3.8e-06 56.2 156 26.3
Lsat_1_v5_gn_0_16480 Lactuca sativa HOM05D008898 ORTHO05D001155 3.8e-06 56.2 156 25.0
Lj2P450T13 Lonicera japonica HOM05D002420 ORTHO05D002422 3.8e-06 56.2 156 26.9
Lj8C33T15 Lonicera japonica HOM05D000664 ORTHO05D000491 3.8e-06 56.2 165 26.1
PGSC0003DMG400019444 Solanum tuberosum HOM05D002420 ORTHO05D002422 3.8e-06 56.2 157 28.7
Carub.0004s1288 Capsella rubella HOM05D002743 ORTHO05D002895 5.0e-06 55.8 127 33.1
CAN.G358.109 Capsicum annuum HOM05D002420 ORTHO05D002422 5.0e-06 55.8 157 29.9
Nitab4.5_0000032g0090 Nicotiana tabacum HOM05D000664 ORTHO05D000491 5.0e-06 55.8 123 29.3
Thecc.09G279900 Theobroma cacao HOM05D008898 ORTHO05D001155 5.0e-06 55.8 177 26.6
A10p32150 Brassica napus HOM05D007779 ORTHO05D009863 6.5e-06 55.5 155 25.8
BraA10t45258Z Brassica rapa HOM05D007779 ORTHO05D009863 6.5e-06 55.5 155 25.8
MD15G1264700 Malus domestica HOM05D002420 ORTHO05D002422 6.5e-06 55.5 153 31.4
Prupe.5G068800 Prunus persica HOM05D001729 ORTHO05D001155 6.5e-06 55.5 152 27.6
Prupe.5G070600 Prunus persica HOM05D001729 ORTHO05D001155 8.5e-06 55.1 152 27.6
Sed0001582 Sechium edule HOM05D002420 ORTHO05D002422 8.5e-06 55.1 107 32.7


User provided reference genes

Program Settings