Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 0.0e+00 1090.5 527 100.0
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.2e-228 796.6 525 72.4
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 8.4e-211 737.3 524 67.7
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 1.1e-210 736.9 528 68.2
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 1.2e-209 733.4 520 68.3
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 4.6e-209 731.5 524 67.0
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 2.3e-208 729.2 521 68.3
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 2.3e-208 729.2 520 67.7
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 5.1e-208 728.0 524 66.6
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 1.6e-206 723.0 516 68.0
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 2.8e-206 722.2 523 66.7
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 4.8e-206 721.5 521 68.1
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 2.4e-205 719.2 527 66.0
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 3.1e-205 718.8 514 67.1
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 1.2e-204 716.8 521 66.6
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 2.6e-204 715.7 519 67.4
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 2.5e-202 709.1 518 65.8
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 2.5e-202 709.1 515 66.8
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 3.2e-202 708.8 518 66.0
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 2.1e-201 706.1 514 66.0
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 4.6e-201 704.9 516 66.9
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 6.1e-201 704.5 516 67.1
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 3.0e-200 702.2 518 64.5
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 6.7e-200 701.0 517 66.0
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 8.8e-200 700.7 518 64.7
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 1.1e-199 700.3 514 66.5
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 3.3e-199 698.7 539 64.6
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 4.3e-199 698.4 524 64.5
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.3e-198 696.8 516 64.0
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 2.2e-198 696.0 533 64.5
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 8.2e-198 694.1 494 68.4
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 1.4e-197 693.3 509 65.4
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.8e-197 693.0 518 64.1
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 5.3e-197 691.4 514 64.8
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 1.3e-195 686.8 535 64.1
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 1.7e-195 686.4 518 63.5
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 6.5e-195 684.5 535 61.1
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 8.5e-195 684.1 527 65.3
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 1.9e-194 682.9 520 63.5
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 2.3e-192 676.0 519 65.1
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 2.2e-190 669.5 625 55.5
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.4e-189 666.8 524 62.6
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 7.0e-189 664.5 522 62.5
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 6.5e-187 657.9 520 61.0
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 9.4e-186 654.1 515 61.6
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 1.6e-185 653.3 508 63.2
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 2.7e-185 652.5 521 60.5
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 2.7e-185 652.5 520 60.8
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 2.7e-185 652.5 508 63.6
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 6.1e-185 651.4 521 60.7
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 3.9e-184 648.7 520 61.9
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 5.2e-184 648.3 470 67.7
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 8.8e-184 647.5 516 62.0
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 8.8e-184 647.5 546 59.7
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 7.4e-183 644.4 523 60.2
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 1.3e-182 643.7 521 61.0
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 2.2e-182 642.9 478 65.9
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 2.8e-182 642.5 520 60.4
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 8.2e-182 641.0 514 61.9
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 4.1e-181 638.6 523 59.3
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 5.9e-180 634.8 515 59.6
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 8.0e-177 624.4 475 64.0
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 4.8e-174 615.1 468 65.2
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 2.4e-173 612.8 562 55.5
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 3.1e-173 612.5 520 59.4
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 5.3e-173 611.7 525 59.4
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 9.1e-173 610.9 517 60.2
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 1.6e-172 610.1 522 59.6
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 6.5e-171 604.7 612 50.5
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 6.5e-171 604.7 451 65.0
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 1.5e-170 603.6 523 57.2
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 3.2e-170 602.4 529 56.1
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 9.4e-170 600.9 527 57.5
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 1.2e-169 600.5 527 57.3
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 5.2e-168 595.1 444 64.9
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 8.8e-168 594.3 478 61.3
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 1.2e-167 594.0 454 64.5
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 2.8e-166 589.3 544 54.2
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 1.4e-165 587.0 608 53.5
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 1.5e-159 567.0 424 65.8
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 1.3e-158 563.9 428 64.7
Cfa003184 Carpinus fangiana HOM05D002451 ORTHO05D007901 1.6e-156 557.0 411 66.4
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 1.1e-154 550.8 427 63.5
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 2.8e-153 546.2 473 57.7
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 6.1e-153 545.0 412 63.1
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 1.5e-151 540.4 377 69.0
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 5.8e-151 538.5 580 48.1
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 4.1e-149 532.3 554 49.3
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 6.6e-147 525.0 378 66.9
Thecc.09G101000 Theobroma cacao HOM05D002451 ORTHO05D007901 1.1e-146 524.2 404 63.4
Gohir.A05G025800 Gossypium hirsutum HOM05D002451 ORTHO05D007901 5.8e-143 511.9 406 62.1
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 1.3e-142 510.8 453 56.7
FvH4_1g06070 Fragaria vesca HOM05D002451 ORTHO05D007901 5.4e-141 505.4 406 59.9
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 2.7e-140 503.1 516 51.4
Phvul.002G309000 Phaseolus vulgaris HOM05D002451 ORTHO05D007901 7.3e-138 495.0 407 59.7
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.2e-137 494.2 378 64.0
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 6.2e-137 491.9 374 62.8
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 1.8e-136 490.3 436 59.4
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 8.6e-131 471.5 429 56.4
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 7.8e-124 448.4 537 45.3
CDE08G0666 Ceratophyllum demersum HOM05D002257 ORTHO05D007901 4.3e-122 442.6 365 59.2
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 1.4e-120 437.6 386 58.3
Carub.0004s2284 Capsella rubella HOM05D002451 ORTHO05D007901 1.8e-120 437.2 370 59.2
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 5.1e-107 392.5 517 45.1
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 5.1e-99 365.9 245 72.7
Gohir.D05G027300 Gossypium hirsutum HOM05D002451 ORTHO05D007901 1.1e-90 338.2 260 63.1
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 5.0e-78 296.2 510 35.7
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 1.2e-71 275.0 421 40.4
SGA_v2.0_scaffold4172G54434 Striga asiatica HOM05D002451 ORTHO05D007901 3.2e-69 266.9 240 54.6
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 8.0e-68 262.3 589 32.3
unitig_46.g18399 Utricularia gibba HOM05D002451 ORTHO05D007901 2.3e-67 260.8 262 53.1
SGA_v2.0_scaffold19G08729 Striga asiatica HOM05D002451 ORTHO05D007901 5.5e-61 239.6 137 79.6
QL02p041683 Quercus lobata HOM05D002451 ORTHO05D007901 1.0e-59 235.3 148 73.6
PRCOL_00006066 Prasinoderma coloniale HOM05D000173 ORTHO05D004400 7.5e-50 202.6 336 36.0
CDE02G1621 Ceratophyllum demersum HOM05D002451 ORTHO05D007901 1.3e-49 201.8 150 64.0
CAN.G4309.1 Capsicum annuum HOM05D002451 ORTHO05D007901 8.0e-44 182.6 141 62.4
Nn1g07675 Nelumbo nucifera HOM05D002451 ORTHO05D007901 6.8e-43 179.5 113 73.5
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 1.5e-42 178.3 125 63.2
Nitab4.5_0000566g0090 Nicotiana tabacum HOM05D002451 ORTHO05D007901 1.7e-38 164.9 89 83.1
Cpa.g.sc40.100 Carica papaya HOM05D002451 ORTHO05D007901 7.3e-37 159.5 91 79.1
unitig_46.g18400 Utricularia gibba HOM05D002451 ORTHO05D007901 1.8e-35 154.8 94 74.5
Cpa.g.c44357 Carica papaya HOM05D002451 ORTHO05D007901 2.6e-34 151.0 141 56.0
Ciclev10010851m.g Citrus clementina HOM05D002451 ORTHO05D007901 1.3e-22 112.1 76 69.7
TAR636G3106 Trochodendron aralioides HOM05D002451 ORTHO05D007901 1.9e-16 91.7 56 71.4
CBR_g41538 Chara braunii HOM05D002451 ORTHO05D007901 4.1e-16 90.5 111 42.3
TPR.G23499 Trifolium pratense HOM05D002451 ORTHO05D007901 2.3e-14 84.7 47 76.6


User provided reference genes

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