Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01385 Aquilegia oxysepala HOM05D007850 ORTHO05D009594 1.7e-39 165.6 87 100.0
Psat1g048160 Pisum sativum HOM05D007850 ORTHO05D009594 5.6e-11 70.9 74 59.5
TPR.G33528 Trifolium pratense HOM05D007850 ORTHO05D009594 5.6e-11 70.9 66 60.6
Glyma.01G006200 Glycine max HOM05D007850 ORTHO05D009594 1.3e-10 69.7 66 59.1
Medtr6g090490 Medicago truncatula HOM05D007850 ORTHO05D009594 1.6e-10 69.3 75 57.3
Cpa.g.sc78.26 Carica papaya HOM05D007850 ORTHO05D009594 2.8e-10 68.6 83 55.4
TAR624G0098 Trochodendron aralioides HOM05D007850 ORTHO05D009594 6.2e-10 67.4 60 63.3
Ca_25585_v3 Cicer arietinum L. HOM05D007850 ORTHO05D009594 1.1e-09 66.6 74 56.8
Glyma.07G125500 Glycine max HOM05D007850 ORTHO05D009594 1.1e-09 66.6 55 60.0
FvH4_1g06390 Fragaria vesca HOM05D007850 ORTHO05D009594 1.4e-09 66.2 77 49.4
FAN19G1200 Fragaria x ananassa HOM05D007850 ORTHO05D009594 1.4e-09 66.2 77 49.4
Duzib168G0149 Durio zibethinus HOM05D007850 ORTHO05D009594 2.4e-09 65.5 75 54.7
Manes.03G028100 Manihot esculenta HOM05D007850 ORTHO05D009594 2.4e-09 65.5 75 53.3
PGSC0003DMG400000292 Solanum tuberosum HOM05D007850 ORTHO05D009594 2.4e-09 65.5 77 46.8
FAN23G2338 Fragaria x ananassa HOM05D007850 ORTHO05D009594 3.1e-09 65.1 77 48.1
FAN26G0602 Fragaria x ananassa HOM05D007850 ORTHO05D009594 3.1e-09 65.1 77 48.1
FAN26G2005 Fragaria x ananassa HOM05D007850 ORTHO05D009594 3.1e-09 65.1 77 48.1
RcHm_v2.0_Chr2g0092131 Rosa chinensis HOM05D007850 ORTHO05D009594 3.1e-09 65.1 77 49.4
SalBow6G1226 Salvia bowleyana HOM05D007850 ORTHO05D009594 3.1e-09 65.1 77 53.2
arahy.Tifrunner.gnm1.ann1.X02Y3Q Arachis hypogaea HOM05D007850 ORTHO05D009594 4.0e-09 64.7 68 54.4
FAN28G1089 Fragaria x ananassa HOM05D007850 ORTHO05D009594 4.0e-09 64.7 77 48.1
Hma1.2p1_0208F.1_g088080 Hydrangea macrophylla HOM05D007850 ORTHO05D009594 4.0e-09 64.7 65 55.4
Phvul.004G174800 Phaseolus vulgaris HOM05D007850 ORTHO05D009594 4.0e-09 64.7 65 56.9
Haze_25835 Corylus avellana HOM05D007850 ORTHO05D009594 5.3e-09 64.3 65 60.0
Gohir.D06G066600 Gossypium hirsutum HOM05D007850 ORTHO05D009594 5.3e-09 64.3 75 54.7
Nitab4.5_0000566g0200 Nicotiana tabacum HOM05D007850 ORTHO05D009594 5.3e-09 64.3 61 50.8
Peaxi162Scf00944g00009 Petunia axillaris HOM05D007850 ORTHO05D009594 5.3e-09 64.3 64 56.2
Prupe.7G218200 Prunus persica HOM05D007850 ORTHO05D009594 5.3e-09 64.3 78 52.6
Nitab4.5_0003079g0010 Nicotiana tabacum HOM05D007850 ORTHO05D009594 6.9e-09 63.9 70 50.0
Cfa003164 Carpinus fangiana HOM05D007850 ORTHO05D009594 9.0e-09 63.5 67 58.2
Lj2g0008653 Lotus japonicus HOM05D007850 ORTHO05D009594 9.0e-09 63.5 71 56.3
Potri.015G106700 Populus trichocarpa HOM05D007850 ORTHO05D009594 9.0e-09 63.5 70 55.7
Thecc.09G099000 Theobroma cacao HOM05D007850 ORTHO05D009594 9.0e-09 63.5 75 53.3
Gohir.A06G068000 Gossypium hirsutum HOM05D007850 ORTHO05D009594 1.2e-08 63.2 70 52.9
Solyc12g008560.1 Solanum lycopersicum HOM05D007850 ORTHO05D009594 1.2e-08 63.2 77 46.8
Gohir.D08G264200 Gossypium hirsutum HOM05D007850 ORTHO05D009594 1.5e-08 62.8 76 52.6
Gorai.004G282100 Gossypium raimondii HOM05D007850 ORTHO05D009594 1.5e-08 62.8 76 52.6
Lalb_Chr22g0352511 Lupinus albus HOM05D007850 ORTHO05D009594 1.5e-08 62.8 67 55.2
Nn8g39046 Nelumbo nucifera HOM05D007850 ORTHO05D009594 2.0e-08 62.4 75 53.3
Rhsim05G0038300 Rhododendron simsii HOM05D007850 ORTHO05D009594 2.0e-08 62.4 71 47.9
arahy.Tifrunner.gnm1.ann1.X1KXE8 Arachis hypogaea HOM05D012186 ORTHO05D009594 2.6e-08 62.0 67 53.7
Gorai.010G078100 Gossypium raimondii HOM05D007850 ORTHO05D009594 2.6e-08 62.0 75 53.3
DCAR_000091 Daucus carota HOM05D007850 ORTHO05D009594 3.4e-08 61.6 75 48.0
DCAR_012032 Daucus carota HOM05D007850 ORTHO05D009594 3.4e-08 61.6 75 48.0
Gohir.A07G009000 Gossypium hirsutum HOM05D007850 ORTHO05D009594 3.4e-08 61.6 77 53.2
Gohir.D07G009300 Gossypium hirsutum HOM05D007850 ORTHO05D009594 3.4e-08 61.6 77 53.2
Gorai.001G009500 Gossypium raimondii HOM05D007850 ORTHO05D009594 3.4e-08 61.6 77 53.2
Sabra12G0079700 Salix brachista HOM05D007850 ORTHO05D009594 3.4e-08 61.6 71 52.1
Sed0003200 Sechium edule HOM05D007850 ORTHO05D009594 3.4e-08 61.6 66 53.0
CAN.G1591.18 Capsicum annuum HOM05D007850 ORTHO05D009594 4.4e-08 61.2 69 52.2
CAN.G2021.4 Capsicum annuum HOM05D007850 ORTHO05D009594 4.4e-08 61.2 69 52.2
ClCG03G016060 Citrullus lanatus HOM05D007850 ORTHO05D009594 4.4e-08 61.2 66 56.1
Cc06_g10600 Coffea canephora HOM05D007850 ORTHO05D009594 4.4e-08 61.2 82 47.6
CSS0000041 Camellia sinensis var. sinensis HOM05D007850 ORTHO05D009594 9.9e-08 60.1 75 45.3
DCAR_012035 Daucus carota HOM05D007850 ORTHO05D009594 9.9e-08 60.1 75 46.7
MELO3C015421.2 Cucumis melo HOM05D007850 ORTHO05D009594 1.3e-07 59.7 66 56.1
CANSAT56G2953 Cannabis sativa HOM05D007850 ORTHO05D009594 1.7e-07 59.3 69 49.3
CAN.G1349.15 Capsicum annuum HOM05D007850 ORTHO05D009594 1.7e-07 59.3 69 50.7
Gohir.A08G243300 Gossypium hirsutum HOM05D007850 ORTHO05D009594 1.7e-07 59.3 76 51.3
ATR0705G131 Amborella trichopoda HOM05D007850 ORTHO05D009594 2.2e-07 58.9 58 51.7
AUR62010878 Chenopodium quinoa HOM05D007850 ORTHO05D009594 2.2e-07 58.9 60 56.7
QL03p050300 Quercus lobata HOM05D007850 ORTHO05D009594 2.2e-07 58.9 65 56.9
CAN.G1677.12 Capsicum annuum HOM05D007850 ORTHO05D009594 2.9e-07 58.5 70 50.0
Eucgr.K01055 Eucalyptus grandis HOM05D007850 ORTHO05D009594 2.9e-07 58.5 77 49.4
CAN.G1084.1 Capsicum annuum HOM05D007850 ORTHO05D009594 3.8e-07 58.2 79 48.1
QL08p048105 Quercus lobata HOM05D007850 ORTHO05D009594 4.9e-07 57.8 75 56.0
CAN.G1357.32 Capsicum annuum HOM05D007850 ORTHO05D009594 6.4e-07 57.4 69 50.7
Sc18g0001560 Simmondsia chinensis HOM05D007850 ORTHO05D009594 8.4e-07 57.0 53 60.4
Actinidia17514 Actinidia chinensis HOM05D007850 ORTHO05D009594 1.1e-06 56.6 66 51.5
EL10Ac8g18368 Beta vulgaris HOM05D007850 ORTHO05D009594 2.4e-06 55.5 71 52.1
AUR62021391 Chenopodium quinoa HOM05D007850 ORTHO05D009594 3.2e-06 55.1 60 53.3
SEGI_13362 Sequoiadendron giganteum HOM05D007850 ORTHO05D009594 3.2e-06 55.1 55 52.7
Sopen12g003500 Solanum pennellii HOM05D007850 ORTHO05D009594 7.1e-06 53.9 65 49.2
Mapoly0058s0037 Marchantia polymorpha HOM05D006043 ORTHO05D007309 9.3e-06 53.5 79 50.6
unitig_8.g4473 Utricularia gibba HOM05D007850 ORTHO05D009594 9.3e-06 53.5 82 46.3


User provided reference genes

Program Settings