Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01356 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 1.7e-111 406.0 202 100.0
Aqoxy5G03966 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 8.0e-69 264.2 211 66.8
TAR383G0888 Trochodendron aralioides HOM05D005768 ORTHO05D007100 2.2e-58 229.6 178 67.4
Dinv27944 Davidia involucrata HOM05D005768 ORTHO05D007100 3.7e-58 228.8 206 58.3
GSVIVG01035325001 Vitis vinifera HOM05D005768 ORTHO05D007100 1.1e-57 227.3 198 61.6
Atru.chr4.1221 Acer truncatum HOM05D005768 ORTHO05D007100 1.9e-57 226.5 207 57.5
TAR624G0371 Trochodendron aralioides HOM05D005768 ORTHO05D007100 1.2e-56 223.8 206 59.7
Hma1.2p1_0603F.1_g187720 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 2.3e-55 219.5 163 66.3
Hma1.2p1_0442F.1_g153950 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 3.9e-55 218.8 206 56.3
FAN20G2834 Fragaria x ananassa HOM05D005768 ORTHO05D007100 5.1e-55 218.4 196 58.7
RcHm_v2.0_Chr6g0306801 Rosa chinensis HOM05D005768 ORTHO05D007100 8.6e-55 217.6 199 57.8
CSS0002565 Camellia sinensis var. sinensis HOM05D005768 ORTHO05D007100 1.5e-54 216.9 201 57.7
Manes.02G043100 Manihot esculenta HOM05D005768 ORTHO05D007100 1.5e-54 216.9 197 58.9
Atru.chr7.2675 Acer truncatum HOM05D005768 ORTHO05D007100 3.3e-54 215.7 195 57.9
Prupe.1G443600 Prunus persica HOM05D005768 ORTHO05D007100 9.5e-54 214.2 188 60.6
CANSAT56G2391 Cannabis sativa HOM05D005768 ORTHO05D007100 1.6e-53 213.4 200 57.0
Ciclev10022280m.g Citrus clementina HOM05D005768 ORTHO05D007100 2.8e-53 212.6 207 54.6
Nn6g34840 Nelumbo nucifera HOM05D005768 ORTHO05D007100 4.0e-52 208.8 193 57.0
FAN27G1715 Fragaria x ananassa HOM05D005768 ORTHO05D007100 6.8e-52 208.0 199 56.8
Duzib168G0475 Durio zibethinus HOM05D005768 ORTHO05D007100 2.6e-51 206.1 188 57.4
Cpa.g.sc1868.1 Carica papaya HOM05D005768 ORTHO05D007100 5.8e-51 204.9 186 59.7
CiPaw.07G201500 Carya illinoinensis HOM05D005768 ORTHO05D007100 5.8e-51 204.9 190 56.3
Thecc.09G049100 Theobroma cacao HOM05D005768 ORTHO05D007100 2.9e-50 202.6 188 58.5
COL.COLO4_21009 Corchorus olitorius HOM05D005768 ORTHO05D007100 4.9e-50 201.8 188 56.9
Actinidia18208 Actinidia chinensis HOM05D005768 ORTHO05D007100 6.4e-50 201.4 206 54.4
Gohir.D07G024000 Gossypium hirsutum HOM05D005768 ORTHO05D007100 1.1e-49 200.7 189 57.1
Gorai.001G024700 Gossypium raimondii HOM05D005768 ORTHO05D007100 1.1e-49 200.7 189 57.1
Glyma.19G233100 Glycine max HOM05D005768 ORTHO05D007100 1.4e-49 200.3 188 55.9
Lalb_Chr24g0397251 Lupinus albus HOM05D005768 ORTHO05D007100 1.9e-49 199.9 202 54.0
PSO063G0290 Papaver somniferum HOM05D005768 ORTHO05D007100 1.9e-49 199.9 197 57.9
Eucgr.C02988 Eucalyptus grandis HOM05D005768 ORTHO05D007100 3.2e-49 199.1 206 53.4
Sopen08g019690 Solanum pennellii HOM05D005768 ORTHO05D007100 4.1e-49 198.7 201 52.7
Cc00_g09250 Coffea canephora HOM05D005768 ORTHO05D007100 5.4e-49 198.4 193 56.0
Solyc08g066030.3 Solanum lycopersicum HOM05D005768 ORTHO05D007100 7.1e-49 198.0 179 56.4
MELO3C003477.2 Cucumis melo HOM05D005768 ORTHO05D007100 1.2e-48 197.2 178 57.9
PSO832G3354 Papaver somniferum HOM05D005768 ORTHO05D007100 1.6e-48 196.8 192 57.3
PGSC0003DMG401025462 Solanum tuberosum HOM05D005768 ORTHO05D007100 2.1e-48 196.4 176 56.8
vmacro07473 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 4.6e-48 195.3 207 53.6
TWI63G1351 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 6.0e-48 194.9 193 53.4
CsaV3_3G048420 Cucumis sativus L. HOM05D005768 ORTHO05D007100 1.7e-47 193.4 178 56.7
PSO832G1534 Papaver somniferum HOM05D005768 ORTHO05D007100 1.7e-47 193.4 194 56.2
PSO063G1479 Papaver somniferum HOM05D005768 ORTHO05D007100 2.3e-47 193.0 197 56.9
PSO063G2632 Papaver somniferum HOM05D005768 ORTHO05D007100 2.3e-47 193.0 197 56.9
PSO063G5891 Papaver somniferum HOM05D005768 ORTHO05D007100 2.3e-47 193.0 197 56.9
Sabra06G0183200 Salix brachista HOM05D005768 ORTHO05D007100 2.3e-47 193.0 175 58.9
THA.LOC104812009 Tarenaya hassleriana HOM05D005768 ORTHO05D007100 2.3e-47 193.0 198 55.1
Rhsim07G0145000 Rhododendron simsii HOM05D005768 ORTHO05D007100 5.1e-47 191.8 207 53.1
Psat0s1830g0160 Pisum sativum HOM05D005768 ORTHO05D007100 8.6e-47 191.0 184 54.3
Potri.006G234800 Populus trichocarpa HOM05D005768 ORTHO05D007100 1.1e-46 190.7 175 57.7
TWI34G0524 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 1.1e-46 190.7 162 59.3
Migut.A00171 Erythranthe guttata HOM05D005768 ORTHO05D007100 1.9e-46 189.9 200 53.5
MD08G1109000 Malus domestica HOM05D005768 ORTHO05D007100 5.6e-46 188.3 194 53.6
EL10Ac5g12654 Beta vulgaris HOM05D005768 ORTHO05D007100 9.6e-46 187.6 207 52.7
Phvul.006G089400 Phaseolus vulgaris HOM05D005768 ORTHO05D007100 1.2e-45 187.2 195 52.3
AT1G76480 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 2.1e-45 186.4 198 51.5
FAN15G1520 Fragaria x ananassa HOM05D005768 ORTHO05D007100 2.8e-45 186.0 159 61.6
Peaxi162Scf00699g00655 Petunia axillaris HOM05D005768 ORTHO05D007100 2.8e-45 186.0 162 58.0
Sed0000338 Sechium edule HOM05D005768 ORTHO05D007100 2.8e-45 186.0 206 49.5
AL1G33910 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 3.6e-45 185.7 192 52.1
Sed0022019 Sechium edule HOM05D005768 ORTHO05D007100 3.6e-45 185.7 206 50.0
AT1G20890 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 6.2e-45 184.9 192 52.1
Lj1g0020400 Lotus japonicus HOM05D005768 ORTHO05D007100 6.2e-45 184.9 180 54.4
TPR.G33208 Trifolium pratense HOM05D005768 ORTHO05D007100 8.1e-45 184.5 182 51.6
QL12p040865 Quercus lobata HOM05D005768 ORTHO05D007100 1.1e-44 184.1 285 41.8
CARHR021320 Cardamine hirsuta HOM05D005768 ORTHO05D007100 1.4e-44 183.7 181 53.6
AUR62017359 Chenopodium quinoa HOM05D005768 ORTHO05D007100 1.8e-44 183.3 180 54.4
PGR044G0118 Punica granatum HOM05D005768 ORTHO05D007100 6.8e-44 181.4 196 50.5
Aa31LG7G5050 Aethionema arabicum HOM05D005768 ORTHO05D007100 1.2e-43 180.6 186 50.5
Haze_01966 Corylus avellana HOM05D005768 ORTHO05D007100 1.5e-43 180.3 156 59.6
BcaB03g14295 Brassica carinata HOM05D005768 ORTHO05D007100 2.6e-43 179.5 181 51.9
Medtr7g112710 Medicago truncatula HOM05D005768 ORTHO05D007100 2.6e-43 179.5 158 58.2
Lsat_1_v5_gn_3_56860 Lactuca sativa HOM05D005768 ORTHO05D007100 3.4e-43 179.1 167 56.9
AUR62010536 Chenopodium quinoa HOM05D005768 ORTHO05D007100 9.9e-43 177.6 164 54.3
Lalb_Chr08g0242881 Lupinus albus HOM05D005768 ORTHO05D007100 9.9e-43 177.6 188 48.9
SalBow6G5216 Salvia bowleyana HOM05D005768 ORTHO05D007100 9.9e-43 177.6 161 60.2
A07p15420 Brassica napus HOM05D005768 ORTHO05D007100 1.7e-42 176.8 180 52.8
Sp1g18590 Schrenkiella parvula HOM05D005768 ORTHO05D007100 2.2e-42 176.4 192 49.0
Nitab4.5_0000318g0060 Nicotiana tabacum HOM05D005768 ORTHO05D007100 2.9e-42 176.0 160 55.6
Sc09g0009490 Simmondsia chinensis HOM05D005768 ORTHO05D007100 3.8e-42 175.6 209 48.3
Thhalv10008823m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 4.9e-42 175.3 185 50.8
Psat0s1830g0280 Pisum sativum HOM05D005768 ORTHO05D007100 6.4e-42 174.9 184 50.5
Ah.02g116310 Amaranthus hybridus HOM05D005768 ORTHO05D007100 8.4e-42 174.5 185 52.4
arahy.Tifrunner.gnm1.ann1.FJ9VJT Arachis hypogaea HOM05D005768 ORTHO05D007100 8.4e-42 174.5 201 47.8
HanXRQChr03g0078001 Helianthus annuus HOM05D005768 ORTHO05D007100 8.4e-42 174.5 196 50.0
TPR.G29192 Trifolium pratense HOM05D005768 ORTHO05D007100 8.4e-42 174.5 160 55.0
Os08g0374900 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 3.2e-41 172.6 169 55.6
BcaC06g34845 Brassica carinata HOM05D005768 ORTHO05D007100 4.2e-41 172.2 180 51.7
BcaB07g32084 Brassica carinata HOM05D005768 ORTHO05D007100 9.3e-41 171.0 183 52.5
Carub.0001s2036 Capsella rubella HOM05D005768 ORTHO05D007100 2.7e-40 169.5 181 51.4
SGA_v2.0_scaffold103G30048 Striga asiatica HOM05D005768 ORTHO05D007100 6.0e-40 168.3 167 57.5
Os03g0804100 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 1.0e-39 167.5 158 56.3
ECA234G0765 Erigeron canadensis HOM05D000185 ORTHO05D000105 1.3e-39 167.2 161 56.5
vmacro05269 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 2.3e-39 166.4 178 53.4
Gohir.A07G022184 Gossypium hirsutum HOM05D005768 ORTHO05D007100 6.6e-39 164.9 139 59.7
Zm00001eb061390 Zea mays HOM05D005768 ORTHO05D007100 8.7e-39 164.5 175 52.6
PSO832G4156 Papaver somniferum HOM05D005768 ORTHO05D007100 2.5e-38 162.9 146 61.6
Nitab4.5_0002021g0070 Nicotiana tabacum HOM05D005768 ORTHO05D007100 3.3e-38 162.5 150 55.3
MSTRG.25924 Avicennia marina HOM05D005768 ORTHO05D007100 3.6e-37 159.1 160 53.8
SEGI_27706 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 3.4e-35 152.5 162 51.2
Lj7A696G17 Lonicera japonica HOM05D005768 ORTHO05D007100 1.4e-33 147.1 206 46.1
unitig_0.g2567 Utricularia gibba HOM05D005768 ORTHO05D007100 1.9e-33 146.7 155 51.0
PSO063G4631 Papaver somniferum HOM05D005768 ORTHO05D007100 4.2e-33 145.6 154 58.4
AL2G36620 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 1.2e-32 144.1 198 45.5
Oeu033885.1 Olea europaea HOM05D005768 ORTHO05D007100 5.1e-31 138.7 119 61.3
SalBow4G3076 Salvia bowleyana HOM05D005768 ORTHO05D007100 6.6e-31 138.3 177 47.5
Hund19578 Selenicereus undatus HOM05D005768 ORTHO05D007100 1.5e-30 137.1 115 60.0
BolC7t42805H Brassica oleracea HOM05D005768 ORTHO05D007100 2.5e-30 136.3 138 52.2
C07p22730 Brassica napus HOM05D005768 ORTHO05D007100 7.3e-30 134.8 138 52.2
BraA06t24798Z Brassica rapa HOM05D005768 ORTHO05D007100 9.6e-30 134.4 183 44.3
ATR0693G003 Amborella trichopoda HOM05D005768 ORTHO05D007100 1.1e-28 131.0 171 43.9
A06p16890 Brassica napus HOM05D005768 ORTHO05D007100 1.4e-28 130.6 152 48.7
MBI02_g46987_MAGBIO Magnolia biondii HOM05D005768 ORTHO05D007100 5.3e-28 128.6 108 66.7
Thhalv10019630m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 2.6e-27 126.3 149 49.7
Ca_05797_v3 Cicer arietinum L. HOM05D001134 ORTHO05D001035 7.6e-27 124.8 118 55.1
C05p19520 Brassica napus HOM05D005768 ORTHO05D007100 9.9e-27 124.4 171 44.4
BolC5t30654H Brassica oleracea HOM05D005768 ORTHO05D007100 9.9e-27 124.4 171 44.4
ClCG02G014210 Citrullus lanatus HOM05D005768 ORTHO05D007100 8.4e-26 121.3 109 58.7
FvH4_2g35150 Fragaria vesca HOM05D005768 ORTHO05D007100 4.2e-25 119.0 111 58.6
Glyma.03G235400 Glycine max HOM05D005768 ORTHO05D007100 2.7e-24 116.3 129 53.5
MBI02_g46884_MAGBIO Magnolia biondii HOM05D000614 ORTHO05D007100 1.3e-23 114.0 129 51.9
Mapoly0062s0068 Marchantia polymorpha HOM05D005768 ORTHO05D007100 1.9e-22 110.2 169 42.0
Pp3c24_1520 Physcomitrium patens HOM05D005768 ORTHO05D007100 1.9e-22 110.2 186 38.2
CDE02G0943 Ceratophyllum demersum HOM05D005768 ORTHO05D007100 3.3e-22 109.4 91 58.2
HPP92_009604 Vanilla planifolia HOM05D005768 ORTHO05D007100 4.0e-20 102.4 109 55.0
Sc09g0009510 Simmondsia chinensis HOM05D005768 ORTHO05D007100 5.3e-20 102.1 90 56.7
HanXRQChr14g0439211 Helianthus annuus HOM05D005768 ORTHO05D007100 6.9e-12 75.1 75 56.0
DCAR_003074 Daucus carota HOM05D001613 ORTHO05D001556 9.0e-12 74.7 97 44.3
Oeu002722.1 Olea europaea HOM05D005768 ORTHO05D007100 5.0e-10 68.9 46 67.4
SEGI_03586 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 6.1e-08 62.0 45 60.0
CBR_g130 Chara braunii HOM05D000019 ORTHO05D000002 1.0e-07 61.2 128 33.6
Cre12.g547734 Chlamydomonas reinhardtii HOM05D005768 ORTHO05D007100 3.0e-07 59.7 102 40.2
BcaC05g25998 Brassica carinata HOM05D005768 ORTHO05D007100 8.7e-07 58.2 56 46.4
MCO02G048 Micromonas commoda HOM05D005768 ORTHO05D007100 5.7e-06 55.5 146 30.1


User provided reference genes

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