Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01301 Aquilegia oxysepala HOM05D000842 ORTHO05D000650 1.2e-37 159.5 89 100.0
Aqoxy3G00420 Aquilegia oxysepala HOM05D000842 ORTHO05D000650 1.5e-22 109.4 79 84.8
Nn3g17632 Nelumbo nucifera HOM05D000842 ORTHO05D000650 3.5e-16 88.2 70 65.7
GSVIVG01036475001 Vitis vinifera HOM05D000842 ORTHO05D000650 3.5e-16 88.2 69 65.2
Actinidia36297 Actinidia chinensis HOM05D001314 ORTHO05D001165 7.7e-16 87.0 70 61.4
ATR0691G138 Amborella trichopoda HOM05D000842 ORTHO05D000650 2.3e-15 85.5 69 65.2
Cfa007982 Carpinus fangiana HOM05D000842 ORTHO05D000650 2.3e-15 85.5 70 61.4
Haze_14091 Corylus avellana HOM05D000842 ORTHO05D000650 2.3e-15 85.5 70 61.4
Dinv33907 Davidia involucrata HOM05D000842 ORTHO05D000650 5.0e-15 84.3 70 62.9
Duzib138G0760 Durio zibethinus HOM05D000842 ORTHO05D000650 6.6e-15 84.0 70 62.9
Manes.02G064700 Manihot esculenta HOM05D000842 ORTHO05D000650 6.6e-15 84.0 70 65.7
Thecc.04G145000 Theobroma cacao HOM05D000842 ORTHO05D000650 6.6e-15 84.0 70 62.9
vmacro05587 Vaccinium macrocarpon HOM05D000842 ORTHO05D000650 6.6e-15 84.0 70 61.4
Hund03460 Selenicereus undatus HOM05D000842 ORTHO05D000650 1.5e-14 82.8 70 60.0
vmacro20273 Vaccinium macrocarpon HOM05D000842 ORTHO05D000650 1.5e-14 82.8 70 61.4
COL.COLO4_38267 Corchorus olitorius HOM05D000842 ORTHO05D000650 4.2e-14 81.3 70 60.0
Manes.01G107000 Manihot esculenta HOM05D000842 ORTHO05D000650 4.2e-14 81.3 70 61.4
Cc03_g12550 Coffea canephora HOM05D000842 ORTHO05D000650 5.5e-14 80.9 70 61.4
CSS0002294 Camellia sinensis var. sinensis HOM05D000842 ORTHO05D000650 7.2e-14 80.5 73 61.6
CSS0025525 Camellia sinensis var. sinensis HOM05D000842 ORTHO05D000650 7.2e-14 80.5 73 61.6
Gohir.A07G072900 Gossypium hirsutum HOM05D000842 ORTHO05D000650 7.2e-14 80.5 70 61.4
Gohir.D07G077500 Gossypium hirsutum HOM05D000842 ORTHO05D000650 7.2e-14 80.5 70 61.4
Gorai.001G082000 Gossypium raimondii HOM05D000842 ORTHO05D000650 7.2e-14 80.5 70 61.4
Rhsim10G0065800 Rhododendron simsii HOM05D000842 ORTHO05D000650 1.6e-13 79.3 70 60.0
Lj4C128T9 Lonicera japonica HOM05D000842 ORTHO05D000650 2.8e-13 78.6 69 60.9
TWI34G1721 Tripterygium wilfordii HOM05D000842 ORTHO05D000650 2.8e-13 78.6 70 58.6
PGR004G2120 Punica granatum HOM05D000842 ORTHO05D000650 4.7e-13 77.8 70 58.6
TAR374G0340 Trochodendron aralioides HOM05D000842 ORTHO05D000650 4.7e-13 77.8 70 58.6
AUR62012472 Chenopodium quinoa HOM05D000842 ORTHO05D000650 6.1e-13 77.4 70 58.6
EL10Ac2g04124 Beta vulgaris HOM05D000842 ORTHO05D000650 1.4e-12 76.3 70 58.6
QL02p053607 Quercus lobata HOM05D000842 ORTHO05D000650 1.4e-12 76.3 70 57.1
Sed0023626 Sechium edule HOM05D000842 ORTHO05D000650 1.4e-12 76.3 70 57.1
CANSAT64G0590 Cannabis sativa HOM05D000842 ORTHO05D000650 1.8e-12 75.9 70 57.1
ClCG11G005220 Citrullus lanatus HOM05D000842 ORTHO05D000650 1.8e-12 75.9 70 57.1
CiPaw.04G004500 Carya illinoinensis HOM05D000842 ORTHO05D000650 2.3e-12 75.5 70 57.1
Duzib268G1582 Durio zibethinus HOM05D000842 ORTHO05D000650 3.0e-12 75.1 70 58.6
Peaxi162Scf00019g00715 Petunia axillaris HOM05D000842 ORTHO05D000650 5.2e-12 74.3 70 57.1
Atru.chr8.779 Acer truncatum HOM05D000842 ORTHO05D000650 6.8e-12 73.9 71 57.7
MELO3C022073.2 Cucumis melo HOM05D000842 ORTHO05D000650 1.2e-11 73.2 70 57.1
Atru.chr1.4096 Acer truncatum HOM05D000842 ORTHO05D000650 1.5e-11 72.8 71 57.7
AUR62031598 Chenopodium quinoa HOM05D000842 ORTHO05D000650 1.5e-11 72.8 70 57.1
Dinv34869 Davidia involucrata HOM05D000842 ORTHO05D000650 1.5e-11 72.8 70 58.6
Hma1.2p1_0588F.1_g184430 Hydrangea macrophylla HOM05D000842 ORTHO05D000650 2.0e-11 72.4 70 58.6
Eucgr.I02103 Eucalyptus grandis HOM05D000842 ORTHO05D000650 2.6e-11 72.0 71 60.6
Potri.017G109700 Populus trichocarpa HOM05D000842 ORTHO05D000650 3.4e-11 71.6 70 57.1
Sabra17G0091800 Salix brachista HOM05D000842 ORTHO05D000650 4.4e-11 71.2 70 55.7
MSTRG.2950 Avicennia marina HOM05D000842 ORTHO05D000650 7.5e-11 70.5 70 50.0
CsaV3_5G038960 Cucumis sativus L. HOM05D000842 ORTHO05D000650 9.8e-11 70.1 70 55.7
FAN02G2188 Fragaria x ananassa HOM05D000842 ORTHO05D000650 1.7e-10 69.3 71 60.6
FAN05G3033 Fragaria x ananassa HOM05D000842 ORTHO05D000650 1.7e-10 69.3 70 60.0
FAN14G2213 Fragaria x ananassa HOM05D000842 ORTHO05D000650 1.7e-10 69.3 70 60.0
RcHm_v2.0_Chr2g0163821 Rosa chinensis HOM05D000842 ORTHO05D000650 1.7e-10 69.3 70 60.0
Sopen02g015830 Solanum pennellii HOM05D000842 ORTHO05D000650 1.7e-10 69.3 71 54.9
Lsat_1_v5_gn_2_86420 Lactuca sativa HOM05D000842 ORTHO05D000650 2.8e-10 68.6 82 50.0
Prupe.3G242800 Prunus persica HOM05D000842 ORTHO05D000650 2.8e-10 68.6 70 57.1
FAN09G2772 Fragaria x ananassa HOM05D000842 ORTHO05D000650 3.7e-10 68.2 70 58.6
FvH4_6g45670 Fragaria vesca HOM05D000842 ORTHO05D000650 6.3e-10 67.4 70 58.6
PGSC0003DMG400026557 Solanum tuberosum HOM05D000842 ORTHO05D000650 6.3e-10 67.4 71 53.5
MD09G1080900 Malus domestica HOM05D000842 ORTHO05D000650 8.3e-10 67.0 70 55.7
Gohir.D12G054500 Gossypium hirsutum HOM05D000842 ORTHO05D000650 1.1e-09 66.6 70 57.1
HPP92_005171 Vanilla planifolia HOM05D000842 ORTHO05D000650 1.1e-09 66.6 79 50.6
Sp5g22100 Schrenkiella parvula HOM05D000842 ORTHO05D000650 1.8e-09 65.9 74 54.1
CAN.G93.40 Capsicum annuum HOM05D000842 ORTHO05D000650 3.1e-09 65.1 71 53.5
Aa31LG2G3540 Aethionema arabicum HOM05D000842 ORTHO05D000650 4.1e-09 64.7 73 54.8
CAN.G792.29 Capsicum annuum HOM05D000842 ORTHO05D000650 4.1e-09 64.7 71 53.5
DCAR_010983 Daucus carota HOM05D000842 ORTHO05D000650 4.1e-09 64.7 70 52.9
PSO063G4214 Papaver somniferum HOM05D000842 ORTHO05D000650 7.0e-09 63.9 80 50.0
PSO782G4516 Papaver somniferum HOM05D000842 ORTHO05D000650 7.0e-09 63.9 80 50.0
Ciclev10012337m.g Citrus clementina HOM05D000842 ORTHO05D000650 1.2e-08 63.2 83 49.4
MD17G1072000 Malus domestica HOM05D000842 ORTHO05D000650 1.2e-08 63.2 70 54.3
Solyc02g065630.4 Solanum lycopersicum HOM05D000842 ORTHO05D000650 1.6e-08 62.8 71 60.6
Thhalv10018757m.g Eutrema salsugineum HOM05D000842 ORTHO05D000650 2.0e-08 62.4 84 50.0
BcaB05g24241 Brassica carinata HOM05D000842 ORTHO05D000650 2.7e-08 62.0 73 52.1
Sc17g0004240 Simmondsia chinensis HOM05D000842 ORTHO05D000650 4.5e-08 61.2 94 41.5
CDE10G0640 Ceratophyllum demersum HOM05D000842 ORTHO05D000650 5.9e-08 60.8 70 55.7
ECA238G3886 Erigeron canadensis HOM05D000842 ORTHO05D000650 5.9e-08 60.8 70 51.4
Hma1.2p1_1233F.1_g268970 Hydrangea macrophylla HOM05D000842 ORTHO05D000650 5.9e-08 60.8 70 48.6
arahy.Tifrunner.gnm1.ann1.KBYC2D Arachis hypogaea HOM05D000842 ORTHO05D000650 1.7e-07 59.3 72 50.0
Oeu033428.1 Olea europaea HOM05D000842 ORTHO05D000650 2.9e-07 58.5 67 50.7
Oeu007108.1 Olea europaea HOM05D000842 ORTHO05D000650 8.6e-07 57.0 70 51.4
Lj1g0019367 Lotus japonicus HOM05D000842 ORTHO05D000650 2.5e-06 55.5 81 49.4
Psat3g192000 Pisum sativum HOM05D000842 ORTHO05D000650 5.6e-06 54.3 78 47.4
Sed0016655 Sechium edule HOM05D000842 ORTHO05D000650 7.3e-06 53.9 70 48.6
Migut.H00552 Erythranthe guttata HOM05D000842 ORTHO05D000650 9.5e-06 53.5 72 41.7


User provided reference genes

Program Settings