Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01300 Aquilegia oxysepala HOM05D000093 ORTHO05D077853 3.6e-48 194.5 93 100.0
CDE01G0269 Ceratophyllum demersum HOM05D000093 ORTHO05D000814 6.0e-11 70.9 49 63.3
Aqoxy2G02263 Aquilegia oxysepala HOM05D000093 ORTHO05D000814 8.1e-08 60.5 43 76.7
arahy.Tifrunner.gnm1.ann1.7V58Y4 Arachis hypogaea HOM05D000093 ORTHO05D000814 6.9e-07 57.4 43 67.4
TAR633G2331 Trochodendron aralioides HOM05D000093 ORTHO05D000814 6.9e-07 57.4 43 69.8
Hma1.2p1_0211F.1_g089800 Hydrangea macrophylla HOM05D000093 ORTHO05D000814 9.0e-07 57.0 43 65.1
PGR102G1611 Punica granatum HOM05D000093 ORTHO05D000814 9.0e-07 57.0 43 67.4
Psat6g135720 Pisum sativum HOM05D000093 ORTHO05D000814 1.2e-06 56.6 42 69.0
VMungo0251G3708 Vigna mungo HOM05D000093 ORTHO05D000814 1.2e-06 56.6 42 69.0
COL.COLO4_18550 Corchorus olitorius HOM05D000093 ORTHO05D000814 1.5e-06 56.2 43 67.4
Rhsim13G0078600 Rhododendron simsii HOM05D000093 ORTHO05D000814 2.0e-06 55.8 43 67.4
BcaB06g28274 Brassica carinata HOM05D000093 ORTHO05D000814 2.6e-06 55.5 43 69.8
BcaC02g12839 Brassica carinata HOM05D000093 ORTHO05D000814 2.6e-06 55.5 43 69.8
A04p22100 Brassica napus HOM05D000093 ORTHO05D000814 2.6e-06 55.5 43 69.8
C04p58200 Brassica napus HOM05D000093 ORTHO05D000814 2.6e-06 55.5 43 69.8
BolC4t27348H Brassica oleracea HOM05D000093 ORTHO05D000814 2.6e-06 55.5 43 69.8
BraA04t17774Z Brassica rapa HOM05D000093 ORTHO05D000814 2.6e-06 55.5 43 69.8
Cc01_g13160 Coffea canephora HOM05D000093 ORTHO05D000814 2.6e-06 55.5 43 67.4
PSO339G4211 Papaver somniferum HOM05D000093 ORTHO05D000814 2.6e-06 55.5 43 67.4
PSO513G0057 Papaver somniferum HOM05D000093 ORTHO05D000814 2.6e-06 55.5 43 67.4
RcHm_v2.0_Chr5g0065871 Rosa chinensis HOM05D000093 ORTHO05D000814 2.6e-06 55.5 43 65.1
Sc12g0001310 Simmondsia chinensis HOM05D000093 ORTHO05D000814 2.6e-06 55.5 43 67.4
Thecc.09G318300 Theobroma cacao HOM05D000093 ORTHO05D000814 2.6e-06 55.5 43 65.1
TPR.G29781 Trifolium pratense HOM05D000093 ORTHO05D000814 2.6e-06 55.5 42 66.7
ATR0559G006 Amborella trichopoda HOM05D000093 ORTHO05D000814 3.4e-06 55.1 43 67.4
Oeu026711.1 Olea europaea HOM05D000093 ORTHO05D000814 3.4e-06 55.1 44 63.6
Sp4g11910 Schrenkiella parvula HOM05D000093 ORTHO05D000814 3.4e-06 55.1 43 69.8
AL4G23660 Arabidopsis lyrata HOM05D000093 ORTHO05D000814 4.4e-06 54.7 43 69.8
arahy.Tifrunner.gnm1.ann1.4H0NN3 Arachis hypogaea HOM05D000093 ORTHO05D000814 4.4e-06 54.7 43 65.1
Carub.0004s1009 Capsella rubella HOM05D000093 ORTHO05D000814 4.4e-06 54.7 43 69.8
Dinv06264 Davidia involucrata HOM05D000093 ORTHO05D000814 4.4e-06 54.7 43 65.1
Duzib170G0687 Durio zibethinus HOM05D000093 ORTHO05D000814 4.4e-06 54.7 43 65.1
Eucgr.B02321 Eucalyptus grandis HOM05D000093 ORTHO05D000814 4.4e-06 54.7 43 65.1
Thhalv10016581m.g Eutrema salsugineum HOM05D000093 ORTHO05D000814 4.4e-06 54.7 43 69.8
Glyma.09G282900 Glycine max HOM05D000093 ORTHO05D000814 4.4e-06 54.7 42 66.7
Potri.001G242600 Populus trichocarpa HOM05D000093 ORTHO05D000814 4.4e-06 54.7 43 65.1
Potri.009G033900 Populus trichocarpa HOM05D000093 ORTHO05D000814 4.4e-06 54.7 43 65.1
AT2G29090 Arabidopsis thaliana HOM05D000093 ORTHO05D000814 5.8e-06 54.3 43 69.8
C04p21860 Brassica napus HOM05D000093 ORTHO05D000814 5.8e-06 54.3 43 69.8
BolC4t23705H Brassica oleracea HOM05D000093 ORTHO05D000814 5.8e-06 54.3 43 69.8
CiPaw.13G091300 Carya illinoinensis HOM05D000093 ORTHO05D000814 5.8e-06 54.3 43 67.4
Haze_24131 Corylus avellana HOM05D000093 ORTHO05D000814 5.8e-06 54.3 43 65.1
ECA247G0932 Erigeron canadensis HOM05D000181 ORTHO05D003134 5.8e-06 54.3 43 62.8
Gohir.A03G044200 Gossypium hirsutum HOM05D000093 ORTHO05D000814 5.8e-06 54.3 43 62.8
Gohir.D03G123300 Gossypium hirsutum HOM05D000093 ORTHO05D000814 5.8e-06 54.3 43 62.8
Gorai.003G129900 Gossypium raimondii HOM05D000093 ORTHO05D000814 5.8e-06 54.3 43 62.8
THA.LOC104800678 Tarenaya hassleriana HOM05D000093 ORTHO05D000814 5.8e-06 54.3 43 67.4
TAR623G1537 Trochodendron aralioides HOM05D000093 ORTHO05D000814 5.8e-06 54.3 43 62.8
GSVIVG01024925001 Vitis vinifera HOM05D000093 ORTHO05D000814 5.8e-06 54.3 43 62.8
Cpa.g.sc81.115 Carica papaya HOM05D000093 ORTHO05D000814 7.6e-06 53.9 43 65.1
Ca_07913_v3 Cicer arietinum L. HOM05D000093 ORTHO05D000814 7.6e-06 53.9 42 64.3
Duzib168G0289 Durio zibethinus HOM05D000093 ORTHO05D000814 7.6e-06 53.9 42 64.3
FvH4_3g36810 Fragaria vesca HOM05D000093 ORTHO05D000814 7.6e-06 53.9 43 62.8
FAN11G2732 Fragaria x ananassa HOM05D000093 ORTHO05D000814 7.6e-06 53.9 43 62.8
FAN21G1598 Fragaria x ananassa HOM05D000093 ORTHO05D000814 7.6e-06 53.9 43 62.8
Gohir.D07G103800 Gossypium hirsutum HOM05D000093 ORTHO05D000814 7.6e-06 53.9 43 62.8
Lj3g0011238 Lotus japonicus HOM05D000093 ORTHO05D000814 7.6e-06 53.9 43 65.1
Lj3g0014497 Lotus japonicus HOM05D000093 ORTHO05D000814 7.6e-06 53.9 43 65.1
PSO063G5402 Papaver somniferum HOM05D000093 ORTHO05D000814 7.6e-06 53.9 43 62.8
PSO782G2527 Papaver somniferum HOM05D000093 ORTHO05D000814 7.6e-06 53.9 43 62.8
Phvul.003G004800 Phaseolus vulgaris HOM05D000093 ORTHO05D000814 7.6e-06 53.9 42 64.3
Sabra09G0024100 Salix brachista HOM05D000093 ORTHO05D000814 7.6e-06 53.9 43 65.1
Sopen08g023920 Solanum pennellii HOM05D000093 ORTHO05D000814 7.6e-06 53.9 51 58.8
vmacro03044 Vaccinium macrocarpon HOM05D000093 ORTHO05D000814 7.6e-06 53.9 43 65.1
arahy.Tifrunner.gnm1.ann1.Z1GZMD Arachis hypogaea HOM05D000093 ORTHO05D000814 9.9e-06 53.5 43 62.8
Ciclev10028346m.g Citrus clementina HOM05D000093 ORTHO05D000814 9.9e-06 53.5 43 65.1
DCAR_000714 Daucus carota HOM05D000093 ORTHO05D000814 9.9e-06 53.5 43 62.8
Duzib150G0195 Durio zibethinus HOM05D000093 ORTHO05D000814 9.9e-06 53.5 43 65.1
HanXRQChr05g0135381 Helianthus annuus HOM05D000093 ORTHO05D000814 9.9e-06 53.5 43 62.8
Medtr1g037580 Medicago truncatula HOM05D000093 ORTHO05D000814 9.9e-06 53.5 42 64.3
Prupe.6G072400 Prunus persica HOM05D000093 ORTHO05D000814 9.9e-06 53.5 43 62.8
Sabra16G0147300 Salix brachista HOM05D000093 ORTHO05D000814 9.9e-06 53.5 43 62.8
SEGI_13890 Sequoiadendron giganteum HOM05D000093 ORTHO05D000814 9.9e-06 53.5 46 65.2


User provided reference genes

Program Settings