Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01245 Aquilegia oxysepala HOM05D007800 ORTHO05D009881 4.3e-292 1007.3 515 100.0
TAR626G0221 Trochodendron aralioides HOM05D007800 ORTHO05D009881 3.4e-156 555.8 524 58.6
CSS0047448 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 1.3e-152 543.9 518 56.6
CSS0040388 Camellia sinensis var. sinensis HOM05D007800 ORTHO05D009881 3.3e-151 539.3 518 56.4
GSVIVG01015219001 Vitis vinifera HOM05D007800 ORTHO05D009881 9.6e-151 537.7 519 56.1
QL02p062921 Quercus lobata HOM05D007800 ORTHO05D009881 5.3e-149 531.9 517 55.7
Cfa003104 Carpinus fangiana HOM05D007800 ORTHO05D009881 3.4e-148 529.3 521 54.1
Duzib150G1500 Durio zibethinus HOM05D007800 ORTHO05D009881 6.7e-144 515.0 521 54.9
Hma1.2p1_0800F.1_g220040 Hydrangea macrophylla HOM05D007800 ORTHO05D009881 2.8e-142 509.6 521 52.8
Haze_25896 Corylus avellana HOM05D007800 ORTHO05D009881 3.7e-142 509.2 521 53.0
MD02G1076500 Malus domestica HOM05D007800 ORTHO05D009881 1.8e-141 506.9 520 53.3
PSO832G3388 Papaver somniferum HOM05D007800 ORTHO05D009881 4.0e-141 505.8 517 53.6
Prupe.7G211900 Prunus persica HOM05D007800 ORTHO05D009881 4.0e-141 505.8 519 53.0
FvH4_1g07200 Fragaria vesca HOM05D007800 ORTHO05D009881 7.6e-140 501.5 522 51.7
CANSAT56G2700 Cannabis sativa HOM05D007800 ORTHO05D009881 4.9e-139 498.8 518 51.2
RcHm_v2.0_Chr2g0093101 Rosa chinensis HOM05D007800 ORTHO05D009881 1.6e-137 493.8 522 51.0
Gohir.A06G071700 Gossypium hirsutum HOM05D007800 ORTHO05D009881 1.8e-136 490.3 524 51.0
Gorai.010G081900 Gossypium raimondii HOM05D007800 ORTHO05D009881 3.9e-136 489.2 524 51.1
Actinidia03799 Actinidia chinensis HOM05D007800 ORTHO05D009881 6.7e-136 488.4 516 51.7
Potri.006G151500 Populus trichocarpa HOM05D007800 ORTHO05D009881 6.7e-136 488.4 516 52.3
TWI32G0405 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 1.9e-135 486.9 527 51.2
Dinv36755 Davidia involucrata HOM05D007800 ORTHO05D009881 4.3e-135 485.7 511 51.7
FAN19G0334 Fragaria x ananassa HOM05D007800 ORTHO05D009881 5.6e-135 485.3 506 51.4
FAN23G2336 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.3e-134 484.2 506 51.2
Nitab4.5_0010222g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 2.8e-134 483.0 521 50.7
Sabra06G0120000 Salix brachista HOM05D007800 ORTHO05D009881 8.2e-134 481.5 514 52.5
Nitab4.5_0010434g0010 Nicotiana tabacum HOM05D007800 ORTHO05D009881 1.0e-131 474.6 521 50.1
Cpa.g.sc93.18 Carica papaya HOM05D007800 ORTHO05D009881 3.8e-131 472.6 524 50.8
Ciclev10010231m.g Citrus clementina HOM05D007800 ORTHO05D009881 2.5e-130 469.9 522 50.0
Cc06_g11240 Coffea canephora HOM05D007800 ORTHO05D009881 6.1e-129 465.3 523 49.7
CiPaw.03G217600 Carya illinoinensis HOM05D007800 ORTHO05D009881 2.5e-127 459.9 517 50.1
Lsat_1_v5_gn_7_37520 Lactuca sativa HOM05D007800 ORTHO05D009881 2.5e-127 459.9 520 49.4
PGSC0003DMG400002319 Solanum tuberosum HOM05D007800 ORTHO05D009881 1.6e-126 457.2 522 48.9
MSTRG.19524 Avicennia marina HOM05D007800 ORTHO05D009881 3.7e-126 456.1 528 49.4
Migut.K00591 Erythranthe guttata HOM05D007800 ORTHO05D009881 1.1e-125 454.5 526 48.3
Eucgr.C00905 Eucalyptus grandis HOM05D007800 ORTHO05D009881 1.8e-125 453.8 526 48.1
AL7G22820 Arabidopsis lyrata HOM05D007800 ORTHO05D009881 4.5e-124 449.1 523 47.6
HanXRQChr03g0060771 Helianthus annuus HOM05D007800 ORTHO05D009881 6.5e-123 445.3 519 47.4
AT4G29560 Arabidopsis thaliana HOM05D007800 ORTHO05D009881 1.1e-122 444.5 523 47.0
BcaB03g12612 Brassica carinata HOM05D007800 ORTHO05D009881 4.2e-122 442.6 523 47.0
Sopen07g014250 Solanum pennellii HOM05D007800 ORTHO05D009881 4.6e-121 439.1 523 47.4
BolC3t21231H Brassica oleracea HOM05D007800 ORTHO05D009881 1.8e-120 437.2 528 46.8
COL.COLO4_18216 Corchorus olitorius HOM05D007800 ORTHO05D009881 1.8e-120 437.2 438 53.4
Carub.0007s1100 Capsella rubella HOM05D007800 ORTHO05D009881 2.3e-120 436.8 521 47.2
PGR142G2964 Punica granatum HOM05D007800 ORTHO05D009881 3.9e-120 436.0 523 47.0
Oeu018234.1 Olea europaea HOM05D007800 ORTHO05D009881 5.1e-120 435.6 507 48.5
A08p19590 Brassica napus HOM05D007800 ORTHO05D009881 8.8e-120 434.9 525 45.7
THA.LOC104801881 Tarenaya hassleriana HOM05D007800 ORTHO05D009881 1.1e-119 434.5 522 46.2
Thhalv10027131m.g Eutrema salsugineum HOM05D007800 ORTHO05D009881 2.5e-119 433.3 532 44.5
C03p89220 Brassica napus HOM05D007800 ORTHO05D009881 3.3e-119 433.0 528 46.8
BcaC01g01177 Brassica carinata HOM05D007800 ORTHO05D009881 1.3e-118 431.0 528 46.6
Solyc07g026640.3 Solanum lycopersicum HOM05D007800 ORTHO05D009881 1.1e-117 427.9 518 46.7
MBI01_g01250_MAGBIO Magnolia biondii HOM05D007800 ORTHO05D009881 3.1e-117 426.4 528 47.0
Manes.16G103100 Manihot esculenta HOM05D007800 ORTHO05D009881 1.2e-116 424.5 432 52.8
Nn8g38899 Nelumbo nucifera HOM05D007800 ORTHO05D009881 3.4e-116 422.9 429 53.6
CARHR237380 Cardamine hirsuta HOM05D007800 ORTHO05D009881 4.5e-116 422.5 527 45.7
SGA_v2.0_scaffold23G09996 Striga asiatica HOM05D007800 ORTHO05D009881 1.7e-115 420.6 520 46.2
Atru.BG.11.p Acer truncatum HOM05D007800 ORTHO05D009881 4.2e-114 416.0 436 51.1
BraA08t33918Z Brassica rapa HOM05D007800 ORTHO05D009881 1.6e-113 414.1 528 44.5
Peaxi162Scf00141g00327 Petunia axillaris HOM05D007800 ORTHO05D009881 1.6e-113 414.1 519 47.4
PSO063G3968 Papaver somniferum HOM05D007800 ORTHO05D009881 7.9e-113 411.8 429 52.2
ECA240G1450 Erigeron canadensis HOM05D007800 ORTHO05D009881 4.4e-111 406.0 535 45.2
Sc08g0008380 Simmondsia chinensis HOM05D007800 ORTHO05D009881 2.2e-107 393.7 523 45.1
Thecc.09G091400 Theobroma cacao HOM05D007800 ORTHO05D009881 2.9e-107 393.3 434 49.5
FAN26G1329 Fragaria x ananassa HOM05D007800 ORTHO05D009881 6.5e-107 392.1 433 49.7
FAN26G3078 Fragaria x ananassa HOM05D007800 ORTHO05D009881 3.2e-106 389.8 433 49.4
SalBow1G2412 Salvia bowleyana HOM05D007800 ORTHO05D009881 1.8e-104 384.0 468 44.0
TWI32G0422 Tripterygium wilfordii HOM05D007800 ORTHO05D009881 5.7e-95 352.4 438 46.3
HPP92_005239 Vanilla planifolia HOM05D007800 ORTHO05D009881 4.5e-92 342.8 530 41.7
DCAR_010680 Daucus carota HOM05D007800 ORTHO05D009881 1.5e-90 337.8 429 44.5
FAN28G0657 Fragaria x ananassa HOM05D007800 ORTHO05D009881 1.0e-88 331.6 321 54.5
Gohir.D06G070300 Gossypium hirsutum HOM05D007800 ORTHO05D009881 5.2e-80 302.8 380 46.1
ATR0782G161 Amborella trichopoda HOM05D007800 ORTHO05D009881 1.5e-79 301.2 568 36.6
MD15G1205200 Malus domestica HOM05D007800 ORTHO05D009881 1.1e-77 295.0 483 40.6
SEGI_31551 Sequoiadendron giganteum HOM05D007800 ORTHO05D009881 4.1e-77 293.1 579 35.2
Lj7P673T61 Lonicera japonica HOM05D007800 ORTHO05D009881 3.5e-68 263.5 255 54.5
Zm00001eb385220 Zea mays HOM05D007800 ORTHO05D009881 1.1e-64 251.9 528 34.1
Os06g0573800 Oryza sativa ssp. japonica HOM05D007800 ORTHO05D009881 3.1e-64 250.4 526 35.6
Mapoly0036s0155 Marchantia polymorpha HOM05D007800 ORTHO05D009881 4.6e-44 183.3 479 30.7
FAN28G2802 Fragaria x ananassa HOM05D007800 ORTHO05D009881 4.0e-40 170.2 170 52.9
Pp3c4_16520 Physcomitrium patens HOM05D007800 ORTHO05D009881 4.0e-32 143.7 438 26.3
Dinv42307 Davidia involucrata HOM05D007800 ORTHO05D009881 2.6e-23 114.4 127 48.0
CDE05G3378 Ceratophyllum demersum HOM05D007800 ORTHO05D009881 4.8e-17 93.6 251 29.9
AagrBONN_evm.TU.Sc2ySwM_344.183 Anthoceros agrestis HOM05D007800 ORTHO05D009881 1.8e-16 91.7 463 26.1
SMO353G0419 Selaginella moellendorffii HOM05D001821 ORTHO05D001778 1.2e-07 62.4 90 33.3
SMO302G0010 Selaginella moellendorffii HOM05D001821 ORTHO05D001778 2.6e-07 61.2 89 36.0


User provided reference genes

Program Settings