Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 0.0e+00 1519.2 798 100.0
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 1.3e-69 268.9 821 32.5
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 1.3e-56 225.7 814 29.0
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 1.7e-53 215.3 824 28.4
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 2.9e-45 188.0 798 28.1
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 4.6e-43 180.6 811 26.9
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 1.1e-41 176.0 139 64.0
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 1.5e-41 175.6 221 49.3
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 7.4e-41 173.3 226 47.8
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 2.1e-40 171.8 235 45.5
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 3.7e-40 171.0 820 28.8
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 1.1e-39 169.5 266 44.0
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 2.4e-39 168.3 813 26.3
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 2.4e-39 168.3 769 27.2
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 3.1e-39 167.9 136 61.0
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.6e-38 164.9 344 35.8
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 2.6e-38 164.9 200 47.0
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 5.8e-38 163.7 137 62.8
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 5.8e-38 163.7 347 35.4
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.3e-37 162.5 345 35.4
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 1.7e-37 162.2 474 32.1
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 3.8e-37 161.0 126 61.9
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 1.9e-36 158.7 206 46.6
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.9e-36 158.7 137 61.3
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.9e-36 158.7 137 61.3
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 2.3e-34 151.8 652 27.9
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 3.9e-34 151.0 248 39.1
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 5.1e-34 150.6 380 33.4
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 5.1e-34 150.6 221 41.2
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.5e-33 149.1 818 26.5
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 1.9e-33 148.7 625 27.4
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 4.3e-33 147.5 231 43.3
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 9.6e-33 146.4 235 40.4
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 1.6e-32 145.6 132 58.3
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.6e-32 145.6 813 25.6
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 1.6e-32 145.6 137 53.3
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 2.1e-32 145.2 983 25.0
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 2.8e-32 144.8 128 57.0
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 3.7e-32 144.4 132 58.3
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 6.2e-32 143.7 132 53.8
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 8.2e-32 143.3 122 58.2
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 1.8e-31 142.1 458 29.7
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 3.1e-31 141.4 192 42.7
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 3.1e-31 141.4 132 59.8
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 4.1e-31 141.0 123 58.5
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 5.3e-31 140.6 127 55.9
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 5.3e-31 140.6 186 43.0
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 9.0e-31 139.8 129 55.0
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 9.0e-31 139.8 155 51.6
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 9.0e-31 139.8 575 29.0
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 2.0e-30 138.7 447 29.1
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 4.5e-30 137.5 127 55.1
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 1.3e-29 136.0 338 34.3
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.7e-29 135.6 130 54.6
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 3.8e-29 134.4 601 28.1
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 6.5e-29 133.7 312 34.9
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 1.9e-28 132.1 192 40.6
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.9e-28 132.1 114 56.1
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 5.5e-28 130.6 827 24.4
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 5.5e-28 130.6 827 24.4
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 9.3e-28 129.8 276 37.0
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 2.1e-27 128.6 339 32.2
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.1e-27 128.6 117 56.4
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 4.6e-27 127.5 381 29.1
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 6.1e-27 127.1 836 23.4
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 1.0e-26 126.3 804 25.2
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 1.3e-26 125.9 442 30.5
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.3e-26 125.2 152 43.4
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 9.7e-25 119.8 258 34.1
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 9.7e-25 119.8 802 23.8
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 1.3e-24 119.4 139 45.3
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 1.3e-24 119.4 129 54.3
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 4.8e-24 117.5 655 25.2
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 8.2e-24 116.7 142 43.7
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 8.2e-24 116.7 805 23.5
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 1.8e-23 115.5 820 25.2
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 9.0e-23 113.2 175 38.9
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 7.7e-22 110.2 143 41.3
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 1.3e-21 109.4 286 31.1
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 1.7e-21 109.0 230 33.9
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 2.2e-21 108.6 133 45.9
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 6.5e-21 107.1 268 32.8
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 8.5e-21 106.7 240 31.7
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 3.2e-20 104.8 314 29.3
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 9.4e-20 103.2 239 31.8
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 2.7e-19 101.7 121 47.1
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 4.6e-19 100.9 849 23.3
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 3.9e-18 97.8 407 27.3
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 1.5e-17 95.9 258 29.5
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 1.5e-17 95.9 375 26.1
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 9.7e-17 93.2 279 32.3
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 2.8e-16 91.7 134 38.1
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 2.8e-16 91.7 139 38.1
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 5.3e-15 87.4 123 36.6
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 9.1e-15 86.7 141 35.5
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 4.5e-14 84.3 85 48.2
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 1.0e-13 83.2 261 28.4
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 5.0e-13 80.9 141 35.5
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 5.0e-13 80.9 141 35.5
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 6.5e-13 80.5 190 34.2
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 1.9e-12 79.0 179 33.0
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 2.5e-12 78.6 128 34.4
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 3.2e-12 78.2 63 61.9
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 6.7e-10 70.5 51 66.7
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 2.0e-09 68.9 605 24.0
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 7.4e-09 67.0 157 31.2
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 1.4e-07 62.8 766 23.1
SEGI_24756 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 1.8e-07 62.4 112 32.1


User provided reference genes

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