Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 4.1e-160 568.2 289 100.0
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 3.0e-70 269.6 308 50.6
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 2.7e-63 246.5 314 48.4
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 2.0e-61 240.4 288 49.7
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 7.7e-58 228.4 286 47.2
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 6.1e-55 218.8 299 45.5
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 2.3e-54 216.9 290 43.8
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 1.2e-53 214.5 267 43.4
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 5.7e-53 212.2 280 43.9
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 1.1e-51 208.0 259 45.9
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 1.4e-51 207.6 290 45.9
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 3.1e-51 206.5 285 43.9
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 4.1e-51 206.1 274 40.1
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 4.1e-51 206.1 292 45.9
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 9.1e-51 204.9 267 41.9
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 4.5e-50 202.6 272 43.8
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 5.9e-50 202.2 273 41.4
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 7.7e-50 201.8 260 44.6
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 7.7e-50 201.8 283 44.9
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 1.3e-49 201.1 295 42.0
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 2.9e-49 199.9 295 41.7
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 3.8e-49 199.5 277 39.0
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 1.1e-48 198.0 293 42.0
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 1.5e-48 197.6 269 44.6
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 1.9e-48 197.2 260 48.1
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 7.2e-48 195.3 259 44.8
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 1.2e-47 194.5 295 40.0
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 2.7e-47 193.4 256 42.2
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 3.6e-47 193.0 329 39.5
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 6.1e-47 192.2 295 40.7
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 1.8e-46 190.7 285 40.4
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 4.0e-46 189.5 303 42.6
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 6.8e-46 188.7 275 42.5
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 3.4e-45 186.4 262 46.6
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 3.4e-45 186.4 291 38.1
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 4.4e-45 186.0 303 40.6
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 4.4e-45 186.0 284 41.2
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 5.7e-45 185.7 293 41.6
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 4.9e-44 182.6 296 42.6
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 6.3e-44 182.2 304 38.8
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 1.4e-43 181.0 285 40.7
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 2.4e-43 180.3 298 41.3
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 4.1e-43 179.5 276 41.7
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 4.1e-43 179.5 293 39.9
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 5.9e-42 175.6 284 40.8
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 1.7e-41 174.1 302 38.1
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 2.9e-41 173.3 260 41.9
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 5.0e-41 172.6 281 39.5
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 1.1e-40 171.4 269 41.6
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 1.1e-40 171.4 269 41.6
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 1.5e-40 171.0 193 50.3
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 7.3e-40 168.7 273 41.8
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 4.7e-39 166.0 308 37.0
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 6.1e-39 165.6 273 41.8
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 8.0e-39 165.2 297 36.4
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 1.0e-38 164.9 210 46.2
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 1.0e-38 164.9 238 41.6
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 1.4e-38 164.5 257 40.5
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 1.4e-38 164.5 257 41.2
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.8e-38 164.1 296 38.5
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 2.3e-38 163.7 296 38.5
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 8.9e-38 161.8 305 38.0
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 2.0e-37 160.6 257 39.7
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 2.6e-37 160.2 256 41.0
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 9.8e-37 158.3 201 42.3
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 1.3e-36 157.9 199 44.2
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 1.3e-36 157.9 300 38.3
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 1.7e-36 157.5 303 36.0
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.7e-36 157.5 192 47.4
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 8.3e-36 155.2 251 38.2
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 3.2e-35 153.3 317 35.6
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 1.2e-34 151.4 303 36.3
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 5.9e-34 149.1 268 38.8
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 1.7e-33 147.5 286 37.4
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 3.0e-33 146.7 208 41.8
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 3.9e-33 146.4 292 34.9
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 1.1e-32 144.8 296 36.5
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 1.6e-31 141.0 286 36.4
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 2.1e-31 140.6 203 39.9
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 3.6e-31 139.8 268 37.3
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 4.7e-31 139.4 303 35.0
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 1.2e-29 134.8 304 33.6
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 1.5e-29 134.4 281 34.9
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 1.5e-29 134.4 281 34.9
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 3.4e-29 133.3 318 36.5
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 5.8e-29 132.5 257 35.8
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 4.9e-28 129.4 266 35.0
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 6.4e-28 129.0 169 49.7
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 2.1e-23 114.0 164 42.1
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 1.2e-21 108.2 201 36.8
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 3.4e-21 106.7 168 44.0
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 9.2e-19 98.6 110 49.1
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 7.8e-18 95.5 173 36.4
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 1.3e-17 94.7 138 42.8
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 3.3e-16 90.1 294 30.3
Os06g0565300 Oryza sativa ssp. japonica HOM05D007444 ORTHO05D009359 2.1e-10 70.9 77 46.8
Pp3c14_13390 Physcomitrium patens HOM05D007444 ORTHO05D009359 1.3e-09 68.2 169 30.8
QL05p011362 Quercus lobata HOM05D007444 ORTHO05D009359 2.3e-09 67.4 111 35.1


User provided reference genes

Program Settings