Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 3.0e-78 295.0 145 100.0
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 9.6e-48 193.7 143 69.2
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 3.6e-47 191.8 145 64.1
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 1.2e-45 186.8 145 65.5
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 1.1e-43 180.3 144 60.4
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 1.4e-43 179.9 167 55.7
CiPaw.01G223500 Carya illinoinensis HOM05D006233 ORTHO05D007247 4.2e-43 178.3 145 62.1
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 1.2e-42 176.8 145 61.4
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 1.6e-42 176.4 144 59.7
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 2.7e-42 175.6 145 63.4
Actinidia39105 Actinidia chinensis HOM05D006233 ORTHO05D007247 6.0e-42 174.5 147 59.9
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 6.0e-42 174.5 146 60.3
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 6.0e-42 174.5 146 60.3
Actinidia26050 Actinidia chinensis HOM05D006233 ORTHO05D007247 1.3e-41 173.3 144 61.1
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.3e-41 173.3 146 60.3
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 1.7e-41 172.9 144 59.0
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 5.1e-41 171.4 146 58.9
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 1.1e-40 170.2 146 58.9
Dinv37902 Davidia involucrata HOM05D006233 ORTHO05D007247 5.6e-40 167.9 144 61.8
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 1.3e-39 166.8 144 59.0
CANSAT56G1839 Cannabis sativa HOM05D006233 ORTHO05D007247 2.1e-39 166.0 146 58.2
MBI04_g36913_MAGBIO Magnolia biondii HOM05D006233 ORTHO05D007247 2.8e-39 165.6 147 61.9
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 2.8e-39 165.6 144 60.4
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 3.6e-39 165.2 144 60.4
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 6.2e-39 164.5 144 58.3
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 1.4e-38 163.3 146 58.2
TWI38G0279 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 1.4e-38 163.3 144 56.9
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 1.8e-38 162.9 144 55.6
Migut.D00962 Erythranthe guttata HOM05D006233 ORTHO05D007247 3.1e-38 162.2 153 58.8
Cpa.g.sc25.68 Carica papaya HOM05D006233 ORTHO05D007247 6.9e-38 161.0 145 59.3
HanXRQChr10g0312401 Helianthus annuus HOM05D006233 ORTHO05D007247 2.0e-37 159.5 148 57.4
PSO210G1065 Papaver somniferum HOM05D006233 ORTHO05D007247 2.6e-37 159.1 149 58.4
GSVIVG01016799001 Vitis vinifera HOM05D006233 ORTHO05D007247 7.6e-37 157.5 148 60.1
Ca_23330_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 1.1e-35 153.7 144 59.0
Sed0001061 Sechium edule HOM05D006233 ORTHO05D007247 1.1e-35 153.7 146 55.5
TPR.G3185 Trifolium pratense HOM05D006233 ORTHO05D007247 1.1e-35 153.7 144 58.3
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 1.4e-35 153.3 145 56.6
Lalb_Chr25g0280771 Lupinus albus HOM05D006233 ORTHO05D007247 2.4e-35 152.5 143 53.1
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 4.2e-35 151.8 143 55.9
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 1.2e-34 150.2 145 57.9
Medtr8g017420 Medicago truncatula HOM05D006233 ORTHO05D007247 6.0e-34 147.9 144 57.6
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 1.0e-33 147.1 145 55.2
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 1.3e-33 146.7 145 55.2
PSO210G5036 Papaver somniferum HOM05D006233 ORTHO05D007247 1.8e-33 146.4 146 54.8
SGA_v2.0_scaffold4G02044 Striga asiatica HOM05D006233 ORTHO05D007247 1.8e-33 146.4 149 57.0
MSTRG.9502 Avicennia marina HOM05D006233 ORTHO05D007247 3.0e-33 145.6 148 55.4
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 3.0e-33 145.6 145 54.5
Lj5A43T71 Lonicera japonica HOM05D006233 ORTHO05D007247 5.1e-33 144.8 158 55.1
Peaxi162Scf00207g01343 Petunia axillaris HOM05D006233 ORTHO05D007247 5.1e-33 144.8 143 55.2
Carub.0003s1344 Capsella rubella HOM05D006233 ORTHO05D007247 6.7e-33 144.4 153 51.6
PGR119G1625 Punica granatum HOM05D006233 ORTHO05D007247 6.7e-33 144.4 148 52.7
CsaV3_3G043640 Cucumis sativus L. HOM05D006233 ORTHO05D007247 8.7e-33 144.1 146 53.4
AL3G26050 Arabidopsis lyrata HOM05D006233 ORTHO05D007247 1.5e-32 143.3 148 52.0
Aa31LG8G1060 Aethionema arabicum HOM05D006233 ORTHO05D007247 2.5e-32 142.5 147 51.7
AT3G13882 Arabidopsis thaliana HOM05D006233 ORTHO05D007247 2.5e-32 142.5 148 52.0
AUR62038159 Chenopodium quinoa HOM05D006233 ORTHO05D007247 2.5e-32 142.5 158 51.3
ClCG07G013950 Citrullus lanatus HOM05D006233 ORTHO05D007247 5.6e-32 141.4 144 53.5
MELO3C013069.2 Cucumis melo HOM05D006233 ORTHO05D007247 5.6e-32 141.4 146 53.4
ECA234G2580 Erigeron canadensis HOM05D006233 ORTHO05D007247 5.6e-32 141.4 147 54.4
Thhalv10021711m.g Eutrema salsugineum HOM05D006233 ORTHO05D007247 5.6e-32 141.4 147 50.3
Nitab4.5_0000255g0250 Nicotiana tabacum HOM05D006233 ORTHO05D007247 5.6e-32 141.4 143 55.9
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 7.4e-32 141.0 146 55.5
BcaC05g29149 Brassica carinata HOM05D006233 ORTHO05D007247 1.6e-31 139.8 147 51.0
C05p53920 Brassica napus HOM05D006233 ORTHO05D007247 1.6e-31 139.8 147 51.0
Actinidia32155 Actinidia chinensis HOM05D006233 ORTHO05D007247 2.1e-31 139.4 144 51.4
Potri.003G041100 Populus trichocarpa HOM05D006233 ORTHO05D007247 2.1e-31 139.4 147 53.1
BolC3t16928H Brassica oleracea HOM05D006233 ORTHO05D007247 2.8e-31 139.0 148 50.7
BcaB04g18809 Brassica carinata HOM05D006233 ORTHO05D007247 3.7e-31 138.7 148 50.0
Ciclev10026736m.g Citrus clementina HOM05D006233 ORTHO05D007247 4.8e-31 138.3 144 53.5
BcaB06g25428 Brassica carinata HOM05D006233 ORTHO05D007247 6.2e-31 137.9 148 51.4
A03p38490 Brassica napus HOM05D006233 ORTHO05D007247 8.1e-31 137.5 148 50.0
C03p46650 Brassica napus HOM05D006233 ORTHO05D007247 1.1e-30 137.1 148 50.0
BcaC01g03969 Brassica carinata HOM05D006233 ORTHO05D007247 1.4e-30 136.7 148 50.0
Sp3g12110 Schrenkiella parvula HOM05D006233 ORTHO05D007247 1.4e-30 136.7 154 51.3
VMungo0331G0931 Vigna mungo HOM05D006233 ORTHO05D007247 1.4e-30 136.7 144 54.2
CARHR088680 Cardamine hirsuta HOM05D006233 ORTHO05D007247 2.4e-30 136.0 149 50.3
AUR62009846 Chenopodium quinoa HOM05D006233 ORTHO05D007247 2.4e-30 136.0 156 49.4
Phvul.010G137600 Phaseolus vulgaris HOM05D006233 ORTHO05D007247 3.1e-30 135.6 144 52.8
BraA03t12999Z Brassica rapa HOM05D006233 ORTHO05D007247 5.3e-30 134.8 152 50.0
Psat4g187760 Pisum sativum HOM05D006233 ORTHO05D007247 9.0e-30 134.0 138 55.8
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.5e-29 133.3 126 52.4
CDE03G0127 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 2.0e-29 132.9 143 49.7
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 3.4e-29 132.1 145 53.1
Nn8g38812 Nelumbo nucifera HOM05D006233 ORTHO05D007247 7.6e-29 131.0 123 57.7
BraA03t13001Z Brassica rapa HOM05D006233 ORTHO05D007247 1.3e-28 130.2 149 49.0
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 1.3e-28 130.2 122 54.9
Glyma.08G191600 Glycine max HOM05D006233 ORTHO05D007247 1.3e-28 130.2 118 58.5
EL10Ac7g16362 Beta vulgaris HOM05D006233 ORTHO05D007247 3.8e-28 128.6 159 45.3
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 4.9e-28 128.3 145 51.7
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 8.4e-28 127.5 146 53.4
THA.LOC104822640 Tarenaya hassleriana HOM05D006233 ORTHO05D007247 1.1e-27 127.1 169 45.0
Hund20828 Selenicereus undatus HOM05D006233 ORTHO05D007247 1.4e-27 126.7 167 46.1
Lj5A42T58 Lonicera japonica HOM05D006233 ORTHO05D007247 2.4e-27 125.9 131 54.2
Glyma.07G008600 Glycine max HOM05D006233 ORTHO05D007247 4.2e-27 125.2 115 58.3
Lj5g0016703 Lotus japonicus HOM05D006233 ORTHO05D007247 2.1e-26 122.9 153 49.7
HanXRQChr04g0094941 Helianthus annuus HOM05D006233 ORTHO05D007247 3.5e-26 122.1 145 51.0
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 3.0e-25 119.0 122 51.6
Rhsim08G0234900 Rhododendron simsii HOM05D006233 ORTHO05D007247 1.5e-24 116.7 130 48.5
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 4.3e-24 115.2 121 50.4
BolC5t34058H Brassica oleracea HOM05D006233 ORTHO05D007247 1.6e-23 113.2 146 43.8
FAN11G2894 Fragaria x ananassa HOM05D000283 ORTHO05D007247 2.8e-23 112.5 145 44.8
Os01g0571200 Oryza sativa ssp. japonica HOM05D006233 ORTHO05D007247 4.8e-23 111.7 143 44.8
Zm00001eb160070 Zea mays HOM05D006233 ORTHO05D007247 9.0e-22 107.5 149 45.6
SGA_v2.0_scaffold68G22913 Striga asiatica HOM05D006233 ORTHO05D007247 1.5e-21 106.7 124 49.2
ATR0789G010 Amborella trichopoda HOM05D006233 ORTHO05D007247 4.9e-20 101.7 193 36.8
A03p38520 Brassica napus HOM05D006233 ORTHO05D007247 6.0e-18 94.7 126 44.4
CDE06G1672 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 2.5e-16 89.4 115 43.5
unitig_8.g4463 Utricularia gibba HOM05D006233 ORTHO05D007247 3.3e-16 89.0 120 42.5
RcHm_v2.0_Chr5g0063721 Rosa chinensis HOM05D006233 ORTHO05D007247 7.4e-16 87.8 93 46.2
HPP92_007656 Vanilla planifolia HOM05D006233 ORTHO05D007247 1.6e-15 86.7 121 39.7
QL05p010144 Quercus lobata HOM05D006233 ORTHO05D007247 2.8e-15 85.9 92 50.0
QL05p010226 Quercus lobata HOM05D006233 ORTHO05D007247 2.8e-15 85.9 93 49.5
BraA05t22362Z Brassica rapa HOM05D006233 ORTHO05D007247 4.8e-15 85.1 178 34.3
BcaC05g29150 Brassica carinata HOM05D006233 ORTHO05D007247 9.0e-14 80.9 143 41.3
CSS0050466 Camellia sinensis var. sinensis HOM05D006233 ORTHO05D007247 1.3e-12 77.0 91 45.1
vmacro18776 Vaccinium macrocarpon HOM05D006233 ORTHO05D007247 1.3e-12 77.0 95 44.2
Pp3c4_29560 Physcomitrium patens HOM05D006233 ORTHO05D007247 2.2e-12 76.3 85 49.4
Nn1g01194 Nelumbo nucifera HOM05D006233 ORTHO05D007247 8.5e-12 74.3 52 75.0
Zm00001eb357240 Zea mays HOM05D006233 ORTHO05D007247 1.9e-11 73.2 131 36.6
Mapoly0016s0011 Marchantia polymorpha HOM05D006233 ORTHO05D007247 3.6e-10 68.9 74 52.7
AagrBONN_evm.TU.Sc2ySwM_368.223 Anthoceros agrestis HOM05D003143 ORTHO05D003628 6.1e-10 68.2 57 61.4
CBR_g8600 Chara braunii HOM05D006233 ORTHO05D007247 1.0e-09 67.4 73 52.1
Oeu011882.1 Olea europaea HOM05D006233 ORTHO05D007247 1.0e-09 67.4 92 45.7
A05p35530 Brassica napus HOM05D006233 ORTHO05D007247 3.3e-08 62.4 91 37.4
Sed0004594 Sechium edule HOM05D006233 ORTHO05D007247 1.7e-07 60.1 90 37.8
Ca_29232_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 2.8e-07 59.3 42 66.7
MCO16G417 Micromonas commoda HOM05D003208 ORTHO05D004103 3.7e-07 58.9 57 50.9
CSS0050070 Camellia sinensis var. sinensis HOM05D041584 ORTHO05D007247 8.2e-07 57.8 33 81.8
SalBow7G1471 Salvia bowleyana HOM05D006233 ORTHO05D007247 1.8e-06 56.6 92 37.0


User provided reference genes

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