Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01140 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 1.5e-68 262.7 127 100.0
Aqoxy7G01137 Aquilegia oxysepala HOM05D003535 ORTHO05D004378 1.3e-21 106.7 140 40.7
Aqoxy7G01138 Aquilegia oxysepala HOM05D003904 ORTHO05D004378 1.3e-11 73.6 132 37.9
QL11p039132 Quercus lobata HOM05D000823 ORTHO05D000088 7.7e-09 64.3 71 42.3
Gorai.005G105400 Gossypium raimondii HOM05D000823 ORTHO05D000088 5.0e-08 61.6 72 43.1
Hma1.2p1_0023F.1_g015270 Hydrangea macrophylla HOM05D000823 ORTHO05D000088 1.4e-07 60.1 74 41.9
MBI16_g19885_MAGBIO Magnolia biondii HOM05D000823 ORTHO05D000088 1.4e-07 60.1 71 35.2
Sc15g0006570 Simmondsia chinensis HOM05D000823 ORTHO05D000088 1.9e-07 59.7 76 38.2
Gohir.A03G116300 Gossypium hirsutum HOM05D000823 ORTHO05D000088 2.5e-07 59.3 72 41.7
GSVIVG01009586001 Vitis vinifera HOM05D000823 ORTHO05D000088 2.5e-07 59.3 72 43.1
Cfa018483 Carpinus fangiana HOM05D000823 ORTHO05D000088 3.2e-07 58.9 72 43.1
QL02p006444 Quercus lobata HOM05D000823 ORTHO05D000088 3.2e-07 58.9 72 43.1
TWI79G1075 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 4.2e-07 58.5 61 49.2
Duzib248G0282 Durio zibethinus HOM05D000823 ORTHO05D009132 5.5e-07 58.2 70 37.1
RcHm_v2.0_Chr6g0259811 Rosa chinensis HOM05D000823 ORTHO05D009132 5.5e-07 58.2 57 45.6
Ca_13317_v3 Cicer arietinum L. HOM05D000823 ORTHO05D000088 9.4e-07 57.4 72 40.3
THA.LOC104803403 Tarenaya hassleriana HOM05D000823 ORTHO05D000088 9.4e-07 57.4 74 40.5
Thecc.02G093100 Theobroma cacao HOM05D000823 ORTHO05D000088 9.4e-07 57.4 70 37.1
Thecc.08G016800 Theobroma cacao HOM05D000823 ORTHO05D000088 9.4e-07 57.4 72 41.7
CiPaw.15G066400 Carya illinoinensis HOM05D000823 ORTHO05D000088 1.2e-06 57.0 72 40.3
Eucgr.I01211 Eucalyptus grandis HOM05D000395 ORTHO05D000088 1.2e-06 57.0 71 39.4
Ciclev10000881m.g Citrus clementina HOM05D000823 ORTHO05D000088 1.6e-06 56.6 87 35.6
FAN24G1365 Fragaria x ananassa HOM05D000823 ORTHO05D009132 1.6e-06 56.6 65 38.5
Cfa004943 Carpinus fangiana HOM05D001372 ORTHO05D002010 2.1e-06 56.2 72 34.7
Nn7g36388 Nelumbo nucifera HOM05D000823 ORTHO05D000088 2.1e-06 56.2 71 36.6
AUR62033880 Chenopodium quinoa HOM05D000823 ORTHO05D000088 2.7e-06 55.8 71 36.6
COL.COLO4_26426 Corchorus olitorius HOM05D000823 ORTHO05D000088 2.7e-06 55.8 72 37.5
Nitab4.5_0002280g0040 Nicotiana tabacum HOM05D000823 ORTHO05D000088 2.7e-06 55.8 72 40.3
CANSAT25G0071 Cannabis sativa HOM05D000823 ORTHO05D000088 3.6e-06 55.5 72 40.3
PSO478G4442 Papaver somniferum HOM05D000823 ORTHO05D000088 3.6e-06 55.5 78 35.9
Nitab4.5_0000068g0140 Nicotiana tabacum HOM05D000823 ORTHO05D000088 4.7e-06 55.1 72 40.3
FvH4_2g40640 Fragaria vesca HOM05D000823 ORTHO05D000088 6.1e-06 54.7 72 38.9
Peaxi162Scf01514g00024 Petunia axillaris HOM05D000823 ORTHO05D000088 6.1e-06 54.7 72 40.3
Rhsim07G0234100 Rhododendron simsii HOM05D000823 ORTHO05D000088 6.1e-06 54.7 74 37.8
Cc10_g03680 Coffea canephora HOM05D000823 ORTHO05D000088 7.9e-06 54.3 72 40.3
Eucgr.F02399 Eucalyptus grandis HOM05D000823 ORTHO05D000088 7.9e-06 54.3 86 33.7
FvH4_2g07240 Fragaria vesca HOM05D000823 ORTHO05D009132 7.9e-06 54.3 65 38.5
Pp3c17_16170 Physcomitrium patens HOM05D000823 ORTHO05D000088 7.9e-06 54.3 80 36.2
Hund26609 Selenicereus undatus HOM05D000823 ORTHO05D000088 7.9e-06 54.3 109 33.9
Sopen04g033170 Solanum pennellii HOM05D000823 ORTHO05D000088 7.9e-06 54.3 72 37.5
SGA_v2.0_scaffold4G02224 Striga asiatica HOM05D000462 ORTHO05D005846 7.9e-06 54.3 56 48.2


User provided reference genes

Program Settings