Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01138 Aquilegia oxysepala HOM05D003904 ORTHO05D004378 8.2e-146 520.4 266 100.0
Aqoxy7G01137 Aquilegia oxysepala HOM05D003535 ORTHO05D004378 3.4e-35 152.9 208 41.8
Aqoxy7G01140 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 7.0e-12 75.5 132 37.9
Aqoxy5G00012 Aquilegia oxysepala HOM05D003904 ORTHO05D004378 6.1e-08 62.4 69 53.6
Lj2C1127G11 Lonicera japonica HOM05D003904 ORTHO05D004378 1.8e-07 60.8 73 46.6
Actinidia09474 Actinidia chinensis HOM05D003904 ORTHO05D004378 2.3e-07 60.5 73 49.3
PSO357G0115 Papaver somniferum HOM05D003904 ORTHO05D004378 3.0e-07 60.1 84 45.2
RcHm_v2.0_Chr6g0284331 Rosa chinensis HOM05D003904 ORTHO05D004378 3.0e-07 60.1 87 41.4
CANSAT01G1788 Cannabis sativa HOM05D003904 ORTHO05D004378 5.2e-07 59.3 67 52.2
Dinv19185 Davidia involucrata HOM05D003904 ORTHO05D004378 5.2e-07 59.3 93 38.7
Potri.014G190800 Populus trichocarpa HOM05D003904 ORTHO05D004378 5.2e-07 59.3 95 36.8
vmacro02774 Vaccinium macrocarpon HOM05D003904 ORTHO05D004378 5.2e-07 59.3 47 61.7
Nn3g20007 Nelumbo nucifera HOM05D003904 ORTHO05D004378 6.7e-07 58.9 95 40.0
PSO170G6902 Papaver somniferum HOM05D003904 ORTHO05D004378 6.7e-07 58.9 61 50.8
Peaxi162Scf00238g00213 Petunia axillaris HOM05D003904 ORTHO05D004378 8.8e-07 58.5 81 40.7
ATR0609G102 Amborella trichopoda HOM05D003904 ORTHO05D004378 1.2e-06 58.2 43 67.4
Migut.D02496 Erythranthe guttata HOM05D003904 ORTHO05D004378 1.2e-06 58.2 77 49.4
Rhsim01G0254500 Rhododendron simsii HOM05D003904 ORTHO05D004378 1.2e-06 58.2 44 65.9
HanXRQChr01g0015241 Helianthus annuus HOM05D003904 ORTHO05D004378 1.5e-06 57.8 72 47.2
Nn1g07928 Nelumbo nucifera HOM05D003904 ORTHO05D004378 1.5e-06 57.8 72 48.6
Prupe.8G200300 Prunus persica HOM05D003904 ORTHO05D004378 1.5e-06 57.8 50 58.0
Rhsim13G0046900 Rhododendron simsii HOM05D003904 ORTHO05D004378 1.5e-06 57.8 54 55.6
CSS0026054 Camellia sinensis var. sinensis HOM05D003904 ORTHO05D004378 2.0e-06 57.4 50 58.0
Sed0012956 Sechium edule HOM05D003535 ORTHO05D003986 2.0e-06 57.4 78 44.9
Carub.0008s0842 Capsella rubella HOM05D003904 ORTHO05D004378 2.6e-06 57.0 105 34.3
CAN.G5.45 Capsicum annuum HOM05D003904 ORTHO05D004378 2.6e-06 57.0 55 52.7
Cfa009095 Carpinus fangiana HOM05D003535 ORTHO05D003986 2.6e-06 57.0 74 44.6
Lsat_1_v5_gn_5_180640 Lactuca sativa HOM05D003904 ORTHO05D004378 2.6e-06 57.0 81 42.0
MD05G1172900 Malus domestica HOM05D003904 ORTHO05D004378 2.6e-06 57.0 45 62.2
Nitab4.5_0002641g0160 Nicotiana tabacum HOM05D003904 ORTHO05D004378 2.6e-06 57.0 107 38.3
Hund05569 Selenicereus undatus HOM05D003904 ORTHO05D004378 2.6e-06 57.0 73 43.8
Solyc09g059620.4 Solanum lycopersicum HOM05D003904 ORTHO05D004378 2.6e-06 57.0 69 44.9
arahy.Tifrunner.gnm1.ann1.YG552F Arachis hypogaea HOM05D003904 ORTHO05D004378 3.3e-06 56.6 109 40.4
Eucgr.K02144 Eucalyptus grandis HOM05D003904 ORTHO05D004378 3.3e-06 56.6 116 36.2
MD10G1161300 Malus domestica HOM05D003904 ORTHO05D004378 3.3e-06 56.6 45 62.2
Nitab4.5_0000345g0040 Nicotiana tabacum HOM05D003904 ORTHO05D004378 3.3e-06 56.6 44 61.4
QL09p052136 Quercus lobata HOM05D003904 ORTHO05D004378 3.3e-06 56.6 105 36.2
QL09p053006 Quercus lobata HOM05D003904 ORTHO05D004378 3.3e-06 56.6 105 36.2
BraA06t26812Z Brassica rapa HOM05D003904 ORTHO05D004378 4.4e-06 56.2 82 40.2
Cc01_g16830 Coffea canephora HOM05D003904 ORTHO05D004378 4.4e-06 56.2 96 38.5
CSS0000113 Camellia sinensis var. sinensis HOM05D003904 ORTHO05D004378 5.7e-06 55.8 95 37.9
Ciclev10022271m.g Citrus clementina HOM05D003904 ORTHO05D004378 5.7e-06 55.8 71 50.7
Migut.N00625 Erythranthe guttata HOM05D003904 ORTHO05D004378 5.7e-06 55.8 73 45.2
TWI18G1339 Tripterygium wilfordii HOM05D003904 ORTHO05D004378 5.7e-06 55.8 93 37.6
TWI75G0190 Tripterygium wilfordii HOM05D003904 ORTHO05D004378 5.7e-06 55.8 94 36.2
Atru.chr6.1416 Acer truncatum HOM05D003904 ORTHO05D004378 7.5e-06 55.5 80 43.8
Ah.08g214500 Amaranthus hybridus HOM05D003904 ORTHO05D004378 7.5e-06 55.5 64 48.4
arahy.Tifrunner.gnm1.ann1.P0KJIP Arachis hypogaea HOM05D003904 ORTHO05D004378 7.5e-06 55.5 109 38.5
Glyma.03G064800 Glycine max HOM05D003904 ORTHO05D004378 7.5e-06 55.5 45 57.8
Nitab4.5_0002616g0050 Nicotiana tabacum HOM05D003904 ORTHO05D004378 7.5e-06 55.5 107 35.5
Sopen09g022790 Solanum pennellii HOM05D003904 ORTHO05D004378 7.5e-06 55.5 101 37.6
SGA_v2.0_scaffold18G08327 Striga asiatica HOM05D003904 ORTHO05D004378 7.5e-06 55.5 43 60.5
MSTRG.20964 Avicennia marina HOM05D003904 ORTHO05D004378 9.7e-06 55.1 69 46.4
FvH4_2g18710 Fragaria vesca HOM05D003904 ORTHO05D004378 9.7e-06 55.1 80 40.0
FAN24G3335 Fragaria x ananassa HOM05D003904 ORTHO05D004378 9.7e-06 55.1 146 32.2
Glyma.16G100600 Glycine max HOM05D003904 ORTHO05D004378 9.7e-06 55.1 54 53.7
Medtr8g012995 Medicago truncatula HOM05D003904 ORTHO05D004378 9.7e-06 55.1 77 41.6
Oeu031826.2 Olea europaea HOM05D003904 ORTHO05D004378 9.7e-06 55.1 46 58.7
Sed0012318 Sechium edule HOM05D003904 ORTHO05D004378 9.7e-06 55.1 83 39.8
Hund18422 Selenicereus undatus HOM05D003904 ORTHO05D004378 9.7e-06 55.1 120 34.2
Zm00001eb085860 Zea mays HOM05D003904 ORTHO05D004378 9.7e-06 55.1 42 61.9


User provided reference genes

Program Settings