Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01029 Aquilegia oxysepala HOM05D003803 ORTHO05D004456 6.4e-120 434.1 222 100.0
Dinv25550 Davidia involucrata HOM05D003803 ORTHO05D004456 2.4e-34 149.8 200 51.0
Peaxi162Scf00348g00817 Petunia axillaris HOM05D003803 ORTHO05D004456 4.1e-26 122.5 127 57.5
Sabra06G0110200 Salix brachista HOM05D003803 ORTHO05D004456 9.2e-26 121.3 77 76.6
Potri.006G141100 Populus trichocarpa HOM05D003803 ORTHO05D004456 2.1e-25 120.2 77 76.6
Nn8g38618 Nelumbo nucifera HOM05D003803 ORTHO05D004456 1.7e-24 117.1 78 75.6
Prupe.7G197000 Prunus persica HOM05D003803 ORTHO05D004456 3.0e-24 116.3 78 73.1
TWI34G0129 Tripterygium wilfordii HOM05D003803 ORTHO05D004456 5.1e-24 115.5 78 74.4
CANSAT56G4286 Cannabis sativa HOM05D003803 ORTHO05D004456 6.6e-24 115.2 77 71.4
Migut.L01571 Erythranthe guttata HOM05D003803 ORTHO05D004456 6.6e-24 115.2 77 74.0
Manes.03G041000 Manihot esculenta HOM05D003803 ORTHO05D004456 6.6e-24 115.2 85 67.1
Thecc.09G075700 Theobroma cacao HOM05D003803 ORTHO05D004456 1.1e-23 114.4 84 67.9
MD02G1093600 Malus domestica HOM05D003803 ORTHO05D004456 1.5e-23 114.0 78 74.4
Gohir.A13G190300 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.9e-23 113.6 78 71.8
Gohir.D13G196350 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.9e-23 113.6 78 71.8
Gorai.013G223800 Gossypium raimondii HOM05D003803 ORTHO05D004456 1.9e-23 113.6 78 71.8
Potri.018G062400 Populus trichocarpa HOM05D003803 ORTHO05D004456 1.9e-23 113.6 78 70.5
Duzib168G2099 Durio zibethinus HOM05D003803 ORTHO05D004456 3.3e-23 112.8 84 65.5
Manes.16G094800 Manihot esculenta HOM05D003803 ORTHO05D004456 3.3e-23 112.8 81 71.6
MD15G1218900 Malus domestica HOM05D003803 ORTHO05D004456 5.6e-23 112.1 77 71.4
Psat1g134600 Pisum sativum HOM05D003803 ORTHO05D004456 5.6e-23 112.1 80 66.2
GSVIVG01015067001 Vitis vinifera HOM05D003803 ORTHO05D004456 5.6e-23 112.1 74 75.7
Duzib187G1358 Durio zibethinus HOM05D003803 ORTHO05D004456 7.3e-23 111.7 74 75.7
Actinidia39653 Actinidia chinensis HOM05D003803 ORTHO05D004456 9.6e-23 111.3 102 63.7
PSO421G0234 Papaver somniferum HOM05D003803 ORTHO05D004456 9.6e-23 111.3 76 68.4
Eucgr.C03259 Eucalyptus grandis HOM05D003803 ORTHO05D004456 1.2e-22 110.9 73 76.7
RcHm_v2.0_Chr2g0095321 Rosa chinensis HOM05D003803 ORTHO05D004456 1.2e-22 110.9 78 70.5
PSO104G0196 Papaver somniferum HOM05D003803 ORTHO05D004456 1.6e-22 110.5 76 67.1
Ciclev10010564m.g Citrus clementina HOM05D003803 ORTHO05D004456 2.1e-22 110.2 78 70.5
FvH4_1g08850 Fragaria vesca HOM05D003803 ORTHO05D004456 2.1e-22 110.2 78 69.2
Lalb_Chr13g0299401 Lupinus albus HOM05D003803 ORTHO05D004456 2.1e-22 110.2 85 62.4
TWI63G1012 Tripterygium wilfordii HOM05D003803 ORTHO05D004456 2.1e-22 110.2 78 71.8
TAR624G1266 Trochodendron aralioides HOM05D003803 ORTHO05D004456 2.1e-22 110.2 77 74.0
FAN28G2731 Fragaria x ananassa HOM05D003803 ORTHO05D004456 2.8e-22 109.8 78 69.2
CARHR192170 Cardamine hirsuta HOM05D003803 ORTHO05D004456 3.6e-22 109.4 75 73.3
Gorai.001G015700 Gossypium raimondii HOM05D003803 ORTHO05D004456 3.6e-22 109.4 72 75.0
BcaB01g04775 Brassica carinata HOM05D003803 ORTHO05D004456 1.1e-21 107.8 73 71.2
Medtr2g042200 Medicago truncatula HOM05D003803 ORTHO05D004456 1.1e-21 107.8 77 66.2
Nitab4.5_0000343g0290 Nicotiana tabacum HOM05D003803 ORTHO05D004456 1.1e-21 107.8 152 48.7
Sed0026577 Sechium edule HOM05D003803 ORTHO05D004456 1.1e-21 107.8 106 54.7
Dinv42400 Davidia involucrata HOM05D003803 ORTHO05D004456 1.4e-21 107.5 208 39.4
Phvul.003G130200 Phaseolus vulgaris HOM05D003803 ORTHO05D004456 1.4e-21 107.5 77 67.5
PGR044G0570 Punica granatum HOM05D003803 ORTHO05D004456 1.4e-21 107.5 73 74.0
CiPaw.04G142500 Carya illinoinensis HOM05D003803 ORTHO05D004456 1.8e-21 107.1 77 66.2
Duzib150G1133 Durio zibethinus HOM05D003803 ORTHO05D004456 1.8e-21 107.1 81 64.2
Hma1.2p1_0169F.1_g074460 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 2.4e-21 106.7 73 75.3
Sp6g23850 Schrenkiella parvula HOM05D003803 ORTHO05D004456 2.4e-21 106.7 75 70.7
Carub.0006s1897 Capsella rubella HOM05D003803 ORTHO05D004456 4.0e-21 105.9 75 69.3
Thhalv10014548m.g Eutrema salsugineum HOM05D003803 ORTHO05D004456 4.0e-21 105.9 76 71.1
FAN26G0190 Fragaria x ananassa HOM05D003803 ORTHO05D004456 4.0e-21 105.9 78 67.9
Gohir.A07G015200 Gossypium hirsutum HOM05D003803 ORTHO05D004456 4.0e-21 105.9 72 73.6
A02p06390 Brassica napus HOM05D003803 ORTHO05D004456 5.2e-21 105.5 75 69.3
BolC2t07055H Brassica oleracea HOM05D003803 ORTHO05D004456 5.2e-21 105.5 75 69.3
BraA02t05584Z Brassica rapa HOM05D003803 ORTHO05D004456 5.2e-21 105.5 75 69.3
Glyma.17G048600 Glycine max HOM05D003803 ORTHO05D004456 5.2e-21 105.5 77 66.2
VMungo1215G1786 Vigna mungo HOM05D003803 ORTHO05D004456 5.2e-21 105.5 77 67.5
MELO3C004657.2 Cucumis melo HOM05D003803 ORTHO05D004456 6.9e-21 105.1 93 58.1
A10p19380 Brassica napus HOM05D003803 ORTHO05D004456 8.9e-21 104.8 75 68.0
Cpa.g.sc28.25 Carica papaya HOM05D003803 ORTHO05D004456 8.9e-21 104.8 198 38.4
Cc06_g12240 Coffea canephora HOM05D003803 ORTHO05D004456 8.9e-21 104.8 80 66.2
Nn6g35693 Nelumbo nucifera HOM05D003803 ORTHO05D004456 1.2e-20 104.4 74 68.9
Solyc07g041980.3 Solanum lycopersicum HOM05D003803 ORTHO05D004456 1.2e-20 104.4 74 68.9
CAN.G595.3 Capsicum annuum HOM05D003803 ORTHO05D004456 1.5e-20 104.0 69 73.9
CiPaw.03G205300 Carya illinoinensis HOM05D003803 ORTHO05D004456 1.5e-20 104.0 77 67.5
Gorai.010G088900 Gossypium raimondii HOM05D003803 ORTHO05D004456 1.5e-20 104.0 84 64.3
MSTRG.26474 Avicennia marina HOM05D003803 ORTHO05D004456 2.0e-20 103.6 71 73.2
Sopen07g021560 Solanum pennellii HOM05D003803 ORTHO05D004456 2.6e-20 103.2 74 68.9
Gohir.D06G076000 Gossypium hirsutum HOM05D003803 ORTHO05D004456 3.4e-20 102.8 84 64.3
Lj6g0024210 Lotus japonicus HOM05D003803 ORTHO05D004456 5.8e-20 102.1 87 57.5
Gohir.A06G077000 Gossypium hirsutum HOM05D003803 ORTHO05D004456 7.6e-20 101.7 80 66.2
Actinidia30227 Actinidia chinensis HOM05D003803 ORTHO05D004456 9.9e-20 101.3 78 66.7
A03p10180 Brassica napus HOM05D003803 ORTHO05D004456 9.9e-20 101.3 78 65.4
C03p11700 Brassica napus HOM05D003803 ORTHO05D004456 9.9e-20 101.3 79 67.1
BolC3t13641H Brassica oleracea HOM05D003803 ORTHO05D004456 9.9e-20 101.3 79 67.1
BraA03t10328Z Brassica rapa HOM05D003803 ORTHO05D004456 9.9e-20 101.3 78 65.4
SalBow5G3024 Salvia bowleyana HOM05D003803 ORTHO05D004456 1.3e-19 100.9 75 68.0
SalBow5G4531 Salvia bowleyana HOM05D003803 ORTHO05D004456 1.3e-19 100.9 75 68.0
ClCG03G015020 Citrullus lanatus HOM05D003803 ORTHO05D004456 1.7e-19 100.5 77 62.3
AL6G32180 Arabidopsis lyrata HOM05D003803 ORTHO05D004456 2.9e-19 99.8 68 70.6
TPR.G8075 Trifolium pratense HOM05D003803 ORTHO05D004456 2.9e-19 99.8 80 58.8
Glyma.09G070100 Glycine max HOM05D003803 ORTHO05D004456 3.8e-19 99.4 79 62.0
Lalb_Chr07g0181211 Lupinus albus HOM05D003803 ORTHO05D004456 4.9e-19 99.0 77 61.0
Oeu007415.1 Olea europaea HOM05D003803 ORTHO05D004456 4.9e-19 99.0 70 70.0
QL11p000998 Quercus lobata HOM05D003803 ORTHO05D004456 4.9e-19 99.0 65 72.3
Lj4g0012858 Lotus japonicus HOM05D003803 ORTHO05D004456 6.4e-19 98.6 66 66.7
MELO3C015527.2 Cucumis melo HOM05D003803 ORTHO05D004456 8.4e-19 98.2 72 65.3
AT5G20635 Arabidopsis thaliana HOM05D003803 ORTHO05D004456 1.1e-18 97.8 68 70.6
THA.LOC104810996 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 1.1e-18 97.8 75 62.7
BraA10t44015Z Brassica rapa HOM05D003803 ORTHO05D004456 1.9e-18 97.1 88 59.1
CsaV3_2G001120 Cucumis sativus L. HOM05D003803 ORTHO05D004456 2.4e-18 96.7 63 69.8
arahy.Tifrunner.gnm1.ann1.1Y26QK Arachis hypogaea HOM05D003803 ORTHO05D004456 3.2e-18 96.3 218 38.1
Glyma.15G178100 Glycine max HOM05D003803 ORTHO05D004456 3.2e-18 96.3 71 64.8
arahy.Tifrunner.gnm1.ann1.KPGD7J Arachis hypogaea HOM05D003803 ORTHO05D004456 7.1e-18 95.1 218 37.2
THA.LOC104799616 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 1.2e-17 94.4 75 64.0
Psat4g018440 Pisum sativum HOM05D003803 ORTHO05D004456 1.6e-17 94.0 62 71.0
TPR.G12599 Trifolium pratense HOM05D003803 ORTHO05D004456 1.6e-17 94.0 82 57.3
CDE05G2490 Ceratophyllum demersum HOM05D003803 ORTHO05D004456 2.1e-17 93.6 71 62.0
Sed0004681 Sechium edule HOM05D003803 ORTHO05D004456 2.1e-17 93.6 78 60.3
SGA_v2.0_scaffold21G09503 Striga asiatica HOM05D003803 ORTHO05D004456 2.1e-17 93.6 89 61.8
Atru.chr7.1717 Acer truncatum HOM05D003803 ORTHO05D004456 7.8e-17 91.7 67 65.7
BcaB08g36515 Brassica carinata HOM05D003803 ORTHO05D004456 1.0e-16 91.3 177 38.4
FAN23G2205 Fragaria x ananassa HOM05D003803 ORTHO05D004456 1.7e-16 90.5 65 69.2
HPP92_004363 Vanilla planifolia HOM05D003803 ORTHO05D004456 1.7e-16 90.5 65 64.6
ATR0598G175 Amborella trichopoda HOM05D003803 ORTHO05D004456 2.3e-16 90.1 75 58.7
Actinidia29937 Actinidia chinensis HOM05D003803 ORTHO05D004456 8.7e-16 88.2 60 70.0
FAN19G2912 Fragaria x ananassa HOM05D003803 ORTHO05D004456 1.5e-15 87.4 63 69.8
Glyma.13G110900 Glycine max HOM05D003803 ORTHO05D004456 1.9e-15 87.0 65 64.6
MSTRG.10505 Avicennia marina HOM05D003803 ORTHO05D004456 2.5e-15 86.7 79 64.6
Rhsim03G0227100 Rhododendron simsii HOM05D003803 ORTHO05D004456 2.5e-15 86.7 125 50.4
arahy.Tifrunner.gnm1.ann1.AJ3133 Arachis hypogaea HOM05D003803 ORTHO05D004456 5.6e-15 85.5 78 57.7
arahy.Tifrunner.gnm1.ann1.TX00RK Arachis hypogaea HOM05D003803 ORTHO05D004456 5.6e-15 85.5 78 57.7
Hma1.2p1_0179F.1_g079480 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 7.3e-15 85.1 62 66.1
Sc18g0002620 Simmondsia chinensis HOM05D003803 ORTHO05D004456 7.3e-15 85.1 76 63.2
Oeu000278.1 Olea europaea HOM05D003803 ORTHO05D004456 1.3e-14 84.3 79 57.0
Gohir.D07G014900 Gossypium hirsutum HOM05D003803 ORTHO05D004456 2.1e-14 83.6 72 61.1
Zm00001eb314160 Zea mays HOM05D003803 ORTHO05D004456 2.8e-14 83.2 65 61.5
CsaV3_1G041120 Cucumis sativus L. HOM05D003803 ORTHO05D004456 3.6e-14 82.8 66 63.6
HPP92_016238 Vanilla planifolia HOM05D003803 ORTHO05D004456 3.6e-14 82.8 71 59.2
Zm00001eb100230 Zea mays HOM05D003803 ORTHO05D004456 4.8e-14 82.4 68 57.4
C09p55600 Brassica napus HOM05D003803 ORTHO05D004456 6.2e-14 82.0 59 67.8
Manes.11G018700 Manihot esculenta HOM05D003803 ORTHO05D004456 6.2e-14 82.0 62 62.9
SGA_v2.0_scaffold609G53181 Striga asiatica HOM05D003803 ORTHO05D004456 1.1e-13 81.3 124 45.2
Medtr8g021170 Medicago truncatula HOM05D003803 ORTHO05D004456 1.4e-13 80.9 83 53.0
Hund26046 Selenicereus undatus HOM05D003803 ORTHO05D004456 1.4e-13 80.9 57 66.7
Ca_02184_v3 Cicer arietinum L. HOM05D003803 ORTHO05D004456 2.4e-13 80.1 60 65.0
Os08g0456600 Oryza sativa ssp. japonica HOM05D003803 ORTHO05D004456 4.0e-13 79.3 68 52.9
Sed0024871 Sechium edule HOM05D003803 ORTHO05D004456 4.0e-13 79.3 60 65.0
SEGI_34897 Sequoiadendron giganteum HOM05D003803 ORTHO05D004456 4.0e-13 79.3 70 51.4
HanXRQChr10g0319741 Helianthus annuus HOM05D003803 ORTHO05D004456 6.9e-13 78.6 67 64.2
ClCG11G001400 Citrullus lanatus HOM05D003803 ORTHO05D004456 9.0e-13 78.2 210 35.2
Lalb_Chr11g0074261 Lupinus albus HOM05D003803 ORTHO05D004456 9.0e-13 78.2 74 52.7
Sc15g0000470 Simmondsia chinensis HOM05D003803 ORTHO05D004456 1.5e-12 77.4 66 59.1
DCAR_024755 Daucus carota HOM05D003803 ORTHO05D004456 3.4e-12 76.3 73 54.8
HanXRQChr09g0276811 Helianthus annuus HOM05D003803 ORTHO05D004456 3.4e-12 76.3 86 48.8
BolC9t58422H Brassica oleracea HOM05D003803 ORTHO05D004456 4.5e-12 75.9 75 54.7
Glyma.07G040200 Glycine max HOM05D003803 ORTHO05D004456 4.5e-12 75.9 67 58.2
Lsat_1_v5_gn_4_94241 Lactuca sativa HOM05D003803 ORTHO05D004456 5.8e-12 75.5 74 54.1
Atru.chr1.4007 Acer truncatum HOM05D003803 ORTHO05D004456 7.6e-12 75.1 65 60.0
Os09g0441900 Oryza sativa ssp. japonica HOM05D003803 ORTHO05D004456 9.9e-12 74.7 70 55.7
COL.COLO4_30738 Corchorus olitorius HOM05D003803 ORTHO05D004456 1.7e-11 73.9 74 52.7
Zm00001eb019600 Zea mays HOM05D003803 ORTHO05D004456 2.2e-11 73.6 64 57.8
ECA232G3825 Erigeron canadensis HOM05D003803 ORTHO05D004456 6.4e-11 72.0 74 50.0
Lalb_Chr04g0263591 Lupinus albus HOM05D003803 ORTHO05D004456 8.4e-11 71.6 69 56.5
Os03g0407400 Oryza sativa ssp. japonica HOM05D003803 ORTHO05D004456 1.9e-10 70.5 64 54.7
vmacro06347 Vaccinium macrocarpon HOM05D003803 ORTHO05D004456 1.9e-10 70.5 162 36.4
TPR.G16739 Trifolium pratense HOM05D003803 ORTHO05D004456 2.4e-10 70.1 81 49.4
Psat4g168440 Pisum sativum HOM05D003803 ORTHO05D004456 3.2e-10 69.7 61 59.0
Haze_26022 Corylus avellana HOM05D003803 ORTHO05D004456 1.2e-09 67.8 48 70.8
Ca_09305_v3 Cicer arietinum L. HOM05D003803 ORTHO05D004456 1.6e-09 67.4 112 42.0
COL.COLO4_18088 Corchorus olitorius HOM05D003803 ORTHO05D004456 2.1e-09 67.0 116 41.4
TAR636G1611 Trochodendron aralioides HOM05D003803 ORTHO05D004456 2.1e-09 67.0 43 76.7
Nitab4.5_0009541g0010 Nicotiana tabacum HOM05D003803 ORTHO05D004456 6.0e-09 65.5 67 55.2
QL05p003994 Quercus lobata HOM05D003803 ORTHO05D004456 7.9e-09 65.1 76 47.4
Rhsim05G0007000 Rhododendron simsii HOM05D003803 ORTHO05D004456 1.0e-08 64.7 43 74.4
Thecc.06G122400 Theobroma cacao HOM05D003803 ORTHO05D004456 1.3e-08 64.3 73 52.1
unitig_699.g19272 Utricularia gibba HOM05D003803 ORTHO05D004456 1.8e-08 63.9 42 73.8
FAN26G2608 Fragaria x ananassa HOM05D003803 ORTHO05D004456 3.9e-08 62.8 43 69.8
unitig_85.g27251 Utricularia gibba HOM05D003803 ORTHO05D004456 5.1e-08 62.4 38 78.9
Haze_16046 Corylus avellana HOM05D000015 ORTHO05D000249 6.7e-08 62.0 58 60.3
PGSC0003DMG400027887 Solanum tuberosum HOM05D003803 ORTHO05D004456 8.7e-08 61.6 43 65.1
BcaC03g13781 Brassica carinata HOM05D003803 ORTHO05D004456 1.1e-07 61.2 40 75.0
MBI13_g43925_MAGBIO Magnolia biondii HOM05D003803 ORTHO05D004456 1.9e-07 60.5 34 82.4
BcaB05g22827 Brassica carinata HOM05D003803 ORTHO05D004456 2.5e-07 60.1 42 71.4
ATR0626G331 Amborella trichopoda HOM05D002369 ORTHO05D002435 2.1e-06 57.0 71 46.5
AagrBONN_evm.TU.Sc2ySwM_362.2112 Anthoceros agrestis HOM05D002369 ORTHO05D002435 3.6e-06 56.2 85 34.1
CSS0005199 Camellia sinensis var. sinensis HOM05D003803 ORTHO05D004456 3.6e-06 56.2 150 35.3
SEGI_33452 Sequoiadendron giganteum HOM05D003803 ORTHO05D004456 6.2e-06 55.5 81 42.0


User provided reference genes

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