Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01016 Aquilegia oxysepala HOM05D004259 ORTHO05D005014 8.3e-202 706.8 356 100.0
TAR376G0692 Trochodendron aralioides HOM05D004259 ORTHO05D005014 3.2e-161 572.0 365 77.5
PSO675G0522 Papaver somniferum HOM05D004259 ORTHO05D005014 1.3e-159 566.6 365 77.0
CiPaw.15G061500 Carya illinoinensis HOM05D004259 ORTHO05D005014 6.6e-159 564.3 366 75.4
Atru.chr8.1940 Acer truncatum HOM05D004259 ORTHO05D005014 1.2e-157 560.1 362 76.5
CSS0003524 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 1.6e-157 559.7 361 75.6
CsaV3_2G028020 Cucumis sativus L. HOM05D004259 ORTHO05D005014 3.6e-157 558.5 362 75.1
Cfa018528 Carpinus fangiana HOM05D004259 ORTHO05D005014 2.4e-156 555.8 364 75.5
PSO339G6255 Papaver somniferum HOM05D004259 ORTHO05D005014 5.2e-156 554.7 365 75.3
Ciclev10012027m.g Citrus clementina HOM05D004259 ORTHO05D005014 1.2e-155 553.5 362 76.2
Nn1g05830 Nelumbo nucifera HOM05D004259 ORTHO05D005014 1.5e-155 553.1 364 74.2
Migut.N02703 Erythranthe guttata HOM05D004259 ORTHO05D005014 2.6e-155 552.4 362 74.0
Sed0023883 Sechium edule HOM05D004259 ORTHO05D005014 2.6e-155 552.4 358 74.9
MELO3C010882.2 Cucumis melo HOM05D004259 ORTHO05D005014 3.4e-155 552.0 362 73.8
Duzib128G0657 Durio zibethinus HOM05D004259 ORTHO05D005014 4.4e-155 551.6 364 74.2
CANSAT01G2810 Cannabis sativa HOM05D004259 ORTHO05D005014 9.9e-155 550.4 365 73.7
PSO541G1765 Papaver somniferum HOM05D004259 ORTHO05D005014 9.9e-155 550.4 365 74.5
ClCG08G015740 Citrullus lanatus HOM05D004259 ORTHO05D005014 1.1e-153 547.0 374 71.4
QL02p005360 Quercus lobata HOM05D004259 ORTHO05D005014 1.4e-153 546.6 417 67.4
Gohir.D11G345100 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.9e-153 546.2 364 73.4
Gorai.007G375500 Gossypium raimondii HOM05D004259 ORTHO05D005014 4.2e-153 545.0 364 73.4
Gohir.A11G326200 Gossypium hirsutum HOM05D004259 ORTHO05D005014 3.5e-152 542.0 364 72.8
Manes.08G078200 Manihot esculenta HOM05D004259 ORTHO05D005014 4.6e-152 541.6 362 73.5
MSTRG.24327 Avicennia marina HOM05D004259 ORTHO05D005014 6.0e-152 541.2 362 72.9
Potri.003G094800 Populus trichocarpa HOM05D004259 ORTHO05D005014 7.8e-152 540.8 362 74.9
Cpa.g.sc973.4 Carica papaya HOM05D004259 ORTHO05D005014 1.3e-151 540.0 363 73.8
Thecc.05G042500 Theobroma cacao HOM05D004259 ORTHO05D005014 3.0e-151 538.9 364 74.7
Lsat_1_v5_gn_1_20280 Lactuca sativa HOM05D004259 ORTHO05D005014 7.3e-150 534.3 353 73.7
MBI02_g17334_MAGBIO Magnolia biondii HOM05D004259 ORTHO05D005014 9.6e-150 533.9 385 70.6
MD08G1103300 Malus domestica HOM05D004259 ORTHO05D005014 1.6e-149 533.1 361 72.9
Oeu018211.1 Olea europaea HOM05D004259 ORTHO05D005014 2.4e-148 529.3 374 70.3
EL10Ac3g06655 Beta vulgaris HOM05D004259 ORTHO05D005014 6.9e-148 527.7 361 72.0
HanXRQChr04g0103531 Helianthus annuus HOM05D004259 ORTHO05D005014 9.0e-148 527.3 356 71.9
FvH4_2g34610 Fragaria vesca HOM05D004259 ORTHO05D005014 2.0e-147 526.2 362 71.8
Peaxi162Scf00162g00029 Petunia axillaris HOM05D004259 ORTHO05D005014 2.0e-147 526.2 370 69.5
Lj5g0003666 Lotus japonicus HOM05D004259 ORTHO05D005014 2.6e-147 525.8 357 71.1
AUR62022427 Chenopodium quinoa HOM05D004259 ORTHO05D005014 4.4e-147 525.0 361 72.0
AUR62039303 Chenopodium quinoa HOM05D004259 ORTHO05D005014 5.8e-147 524.6 361 71.7
FAN15G2861 Fragaria x ananassa HOM05D001625 ORTHO05D005014 7.6e-147 524.2 362 71.8
Lj3C736T6 Lonicera japonica HOM05D004259 ORTHO05D005014 9.9e-147 523.9 359 73.0
RcHm_v2.0_Chr6g0307691 Rosa chinensis HOM05D004259 ORTHO05D005014 2.2e-146 522.7 362 71.5
THA.LOC104806568 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 2.2e-146 522.7 361 69.5
THA.LOC104809222 Tarenaya hassleriana HOM05D004259 ORTHO05D005014 3.8e-146 521.9 364 70.3
FAN20G1942 Fragaria x ananassa HOM05D004259 ORTHO05D005014 1.4e-145 520.0 362 71.0
A05p08400 Brassica napus HOM05D004259 ORTHO05D005014 1.9e-145 519.6 361 68.7
Peaxi162Scf00929g00211 Petunia axillaris HOM05D004259 ORTHO05D005014 3.2e-145 518.8 370 68.9
PGR031G2227 Punica granatum HOM05D004259 ORTHO05D005014 4.2e-145 518.5 365 71.0
BcaB02g09273 Brassica carinata HOM05D004259 ORTHO05D005014 7.1e-145 517.7 361 68.7
Sp4g19910 Schrenkiella parvula HOM05D004259 ORTHO05D005014 7.1e-145 517.7 361 69.0
BraA05t19805Z Brassica rapa HOM05D004259 ORTHO05D005014 9.3e-145 517.3 361 68.7
PGSC0003DMG400027003 Solanum tuberosum HOM05D004259 ORTHO05D005014 1.6e-144 516.5 363 69.7
Haze_17552 Corylus avellana HOM05D004259 ORTHO05D005014 2.1e-144 516.2 366 71.6
C04p10400 Brassica napus HOM05D004259 ORTHO05D005014 2.7e-144 515.8 361 68.4
Glyma.14G082100 Glycine max HOM05D004259 ORTHO05D005014 2.7e-144 515.8 368 70.4
Sopen06g029870 Solanum pennellii HOM05D004259 ORTHO05D005014 3.5e-144 515.4 363 69.4
Phvul.001G021100 Phaseolus vulgaris HOM05D004259 ORTHO05D005014 4.6e-144 515.0 367 70.3
BolC4t22638H Brassica oleracea HOM05D004259 ORTHO05D005014 7.9e-144 514.2 361 68.4
Solyc06g073510.3 Solanum lycopersicum HOM05D004259 ORTHO05D005014 1.0e-143 513.8 363 68.9
CAN.G65.190 Capsicum annuum HOM05D004259 ORTHO05D005014 1.3e-143 513.5 370 69.2
Ca_01811_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 1.3e-143 513.5 349 71.9
Ca_29610_v3 Cicer arietinum L. HOM05D004259 ORTHO05D005014 1.3e-143 513.5 349 71.9
TPR.G17553 Trifolium pratense HOM05D004259 ORTHO05D005014 1.7e-143 513.1 345 72.2
BcaC02g11869 Brassica carinata HOM05D004259 ORTHO05D005014 3.0e-143 512.3 360 68.1
Thhalv10016846m.g Eutrema salsugineum HOM05D004259 ORTHO05D005014 8.7e-143 510.8 361 67.9
ATR0100G023 Amborella trichopoda HOM05D004259 ORTHO05D005014 1.9e-142 509.6 361 71.2
CARHR132030 Cardamine hirsuta HOM05D004259 ORTHO05D005014 2.5e-142 509.2 361 67.9
Carub.0004s1948 Capsella rubella HOM05D004259 ORTHO05D005014 9.6e-142 507.3 361 67.6
AL4G34050 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 1.3e-141 506.9 361 67.9
SalBow2G1152 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.3e-141 506.9 378 66.4
Dinv39327 Davidia involucrata HOM05D004259 ORTHO05D005014 2.1e-141 506.1 319 77.4
Eucgr.F00239 Eucalyptus grandis HOM05D004259 ORTHO05D005014 4.8e-141 505.0 356 68.0
SalBow2G2463 Salvia bowleyana HOM05D004259 ORTHO05D005014 6.2e-141 504.6 378 66.1
SalBow2G2012 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.1e-140 503.8 378 65.9
unitig_26.g10027 Utricularia gibba HOM05D004259 ORTHO05D005014 1.1e-140 503.8 364 68.1
Medtr1g019770 Medicago truncatula HOM05D004259 ORTHO05D005014 1.4e-140 503.4 345 71.0
Lalb_Chr19g0129351 Lupinus albus HOM05D004259 ORTHO05D005014 6.9e-140 501.1 361 68.4
VMungo0647G0522 Vigna mungo HOM05D004259 ORTHO05D005014 9.0e-140 500.7 365 68.5
Psat6g012600 Pisum sativum HOM05D004259 ORTHO05D005014 4.5e-139 498.4 363 68.3
Nitab4.5_0002664g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 8.4e-138 494.2 393 63.6
Sabra03G0064000 Salix brachista HOM05D004259 ORTHO05D005014 1.4e-137 493.4 358 70.7
CDE10G1325 Ceratophyllum demersum HOM05D004259 ORTHO05D005014 2.4e-137 492.7 356 67.4
Nitab4.5_0000111g0020 Nicotiana tabacum HOM05D004259 ORTHO05D005014 9.3e-137 490.7 384 65.6
AT2G37560 Arabidopsis thaliana HOM05D004259 ORTHO05D005014 1.2e-136 490.3 354 66.1
Sabra11G0061200 Salix brachista HOM05D004259 ORTHO05D005014 1.2e-136 490.3 359 70.2
Nitab4.5_0002045g0130 Nicotiana tabacum HOM05D004259 ORTHO05D005014 8.7e-135 484.2 364 66.5
Peaxi162Scf00003g02311 Petunia axillaris HOM05D004259 ORTHO05D005014 1.1e-134 483.8 394 63.5
FAN27G2417 Fragaria x ananassa HOM05D004259 ORTHO05D005014 3.3e-134 482.3 362 67.7
Os03g0184700 Oryza sativa ssp. japonica HOM05D004259 ORTHO05D005014 2.1e-133 479.6 353 67.1
TWI53G0519 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 2.6e-131 472.6 362 67.7
ECA247G2793 Erigeron canadensis HOM05D004259 ORTHO05D005014 1.3e-130 470.3 315 71.4
Sc07g0003460 Simmondsia chinensis HOM05D004259 ORTHO05D005014 2.2e-130 469.5 317 72.6
CSS0037728 Camellia sinensis var. sinensis HOM05D004259 ORTHO05D005014 6.5e-130 468.0 354 66.9
arahy.Tifrunner.gnm1.ann1.1PWX74 Arachis hypogaea HOM05D004259 ORTHO05D005014 3.2e-129 465.7 367 64.9
arahy.Tifrunner.gnm1.ann1.63NC9C Arachis hypogaea HOM05D004259 ORTHO05D005014 3.2e-129 465.7 367 64.9
Cc10_g04310 Coffea canephora HOM05D004259 ORTHO05D005014 9.3e-129 464.2 355 64.2
Zm00001eb248940 Zea mays HOM05D004259 ORTHO05D005014 9.3e-129 464.2 359 64.6
Rhsim10G0028600 Rhododendron simsii HOM05D004259 ORTHO05D005014 1.6e-128 463.4 362 66.0
MD15G1084600 Malus domestica HOM05D004259 ORTHO05D005014 2.3e-127 459.5 370 63.8
SGA_v2.0_scaffold204G41641 Striga asiatica HOM05D004259 ORTHO05D005014 3.9e-127 458.8 361 63.7
SalBow3G4106 Salvia bowleyana HOM05D004259 ORTHO05D005014 5.1e-127 458.4 353 64.6
Haze_17543 Corylus avellana HOM05D004259 ORTHO05D005014 5.8e-123 444.9 321 70.4
GSVIVG01009522001 Vitis vinifera HOM05D004259 ORTHO05D005014 7.6e-123 444.5 291 74.9
Hma1.2p1_0718F.1_g208420 Hydrangea macrophylla HOM05D004259 ORTHO05D005014 1.0e-119 434.1 293 75.1
Nitab4.5_0004918g0050 Nicotiana tabacum HOM05D004259 ORTHO05D005014 3.9e-119 432.2 354 62.1
Glyma.17G243200 Glycine max HOM05D004259 ORTHO05D005014 3.3e-118 429.1 291 72.5
Prupe.1G438300 Prunus persica HOM05D004259 ORTHO05D005014 6.3e-117 424.9 298 72.1
SalBow2G2610 Salvia bowleyana HOM05D004259 ORTHO05D005014 1.3e-114 417.2 378 58.5
Rhsim07G0229700 Rhododendron simsii HOM05D004259 ORTHO05D005014 2.2e-114 416.4 328 64.6
Ah.05g168820 Amaranthus hybridus HOM05D001625 ORTHO05D005014 2.5e-113 412.9 298 68.5
SEGI_21568 Sequoiadendron giganteum HOM05D004259 ORTHO05D005014 5.0e-106 388.7 286 66.4
SalBow2G0695 Salvia bowleyana HOM05D004259 ORTHO05D005014 3.2e-105 386.0 279 68.1
Pp3c18_14740 Physcomitrium patens HOM05D004259 ORTHO05D005014 1.1e-102 377.5 344 54.9
AagrBONN_evm.TU.Sc2ySwM_344.5209 Anthoceros agrestis HOM05D004259 ORTHO05D005014 4.4e-102 375.6 354 52.5
Actinidia29866 Actinidia chinensis HOM05D004259 ORTHO05D005014 5.7e-102 375.2 354 55.9
vmacro04457 Vaccinium macrocarpon HOM05D004259 ORTHO05D005014 2.2e-101 373.2 362 56.9
Rhsim10G0028100 Rhododendron simsii HOM05D004259 ORTHO05D005014 1.9e-97 360.1 362 55.5
COL.COLO4_14836 Corchorus olitorius HOM05D004259 ORTHO05D005014 3.2e-97 359.4 356 54.5
CBR_g6665 Chara braunii HOM05D004259 ORTHO05D005014 5.2e-95 352.1 335 50.4
RcHm_v2.0_Chr6g0307531 Rosa chinensis HOM05D004259 ORTHO05D005014 5.2e-95 352.1 357 55.2
Mapoly0106s0035 Marchantia polymorpha HOM05D004259 ORTHO05D005014 1.5e-94 350.5 316 53.5
SMO147G0302 Selaginella moellendorffii HOM05D004259 ORTHO05D005014 9.7e-94 347.8 328 51.8
SHI12655 Sapria himalayana HOM05D004259 ORTHO05D005014 1.6e-88 330.5 357 52.1
TWI53G0792 Tripterygium wilfordii HOM05D004259 ORTHO05D005014 6.3e-85 318.5 263 65.0
HPP92_027219 Vanilla planifolia HOM05D004259 ORTHO05D005014 5.0e-66 255.8 154 77.9
MCO16G222 Micromonas commoda HOM05D004259 ORTHO05D005014 2.0e-59 233.8 332 38.3
CDE10G0377 Ceratophyllum demersum HOM05D004259 ORTHO05D005014 2.3e-55 220.3 137 75.2
PRCOL_00004897 Prasinoderma coloniale HOM05D004259 ORTHO05D005014 9.9e-46 188.3 374 32.4
Gohir.D10G137766 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.2e-37 160.6 140 57.1
Cre03.g199400 Chlamydomonas reinhardtii HOM05D004259 ORTHO05D005014 5.4e-36 156.0 339 34.2
HPP92_027220 Vanilla planifolia HOM05D004259 ORTHO05D005014 2.1e-35 154.1 125 64.0
Nitab4.5_0000017g0120 Nicotiana tabacum HOM05D004259 ORTHO05D005014 7.3e-33 145.6 199 41.7
Aa31LG5G22990 Aethionema arabicum HOM05D004259 ORTHO05D005014 9.0e-31 138.7 135 52.6
AL4G34080 Arabidopsis lyrata HOM05D004259 ORTHO05D005014 3.4e-30 136.7 105 65.7
Cc00_g16720 Coffea canephora HOM05D004259 ORTHO05D005014 2.4e-28 130.6 111 63.1
Gohir.D02G104501 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.5e-25 121.3 117 53.0
Gorai.005G118700 Gossypium raimondii HOM05D004259 ORTHO05D005014 3.3e-25 120.2 117 53.0
Cfa024619 Carpinus fangiana HOM05D004259 ORTHO05D005014 9.6e-25 118.6 339 26.5
Gohir.D12G080700 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.4e-23 114.0 88 64.8
Gorai.011G277900 Gossypium raimondii HOM05D004259 ORTHO05D005014 9.0e-23 112.1 86 62.8
Actinidia38053 Actinidia chinensis HOM05D004259 ORTHO05D005014 1.6e-19 101.3 87 64.4
PSO724G0286 Papaver somniferum HOM05D004259 ORTHO05D005014 2.3e-18 97.4 109 51.4
Gohir.D03G074850 Gossypium hirsutum HOM05D004259 ORTHO05D005014 3.9e-18 96.7 80 61.2
PSO724G0742 Papaver somniferum HOM05D004259 ORTHO05D005014 1.5e-17 94.7 109 50.5
Aa31sc112G60 Aethionema arabicum HOM05D004259 ORTHO05D005014 1.9e-17 94.4 80 58.8
Gohir.D01G124400 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.9e-17 94.4 79 60.8
Gohir.D04G089650 Gossypium hirsutum HOM05D004259 ORTHO05D005014 2.5e-17 94.0 80 58.8
Gorai.008G056700 Gossypium raimondii HOM05D004259 ORTHO05D005014 2.5e-17 94.0 80 60.0
Cc06_g20720 Coffea canephora HOM05D004259 ORTHO05D005014 3.3e-17 93.6 104 54.8
Gohir.D02G123750 Gossypium hirsutum HOM05D004259 ORTHO05D005014 4.3e-17 93.2 79 59.5
Gohir.D09G120150 Gossypium hirsutum HOM05D004259 ORTHO05D005014 7.4e-17 92.4 79 59.5
Gorai.005G130400 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.3e-16 91.7 79 58.2
Gorai.004G133100 Gossypium raimondii HOM05D004259 ORTHO05D005014 4.8e-16 89.7 79 59.5
Gorai.012G099900 Gossypium raimondii HOM05D004259 ORTHO05D005014 6.2e-16 89.4 80 57.5
Gorai.006G043100 Gossypium raimondii HOM05D004259 ORTHO05D005014 1.8e-15 87.8 102 52.0
Gohir.D10G134400 Gossypium hirsutum HOM05D004259 ORTHO05D005014 9.0e-15 85.5 70 57.1
SEGI_22221 Sequoiadendron giganteum HOM05D004259 ORTHO05D005014 2.0e-14 84.3 73 60.3
EL10Ac4g08135 Beta vulgaris HOM05D004259 ORTHO05D005014 4.5e-14 83.2 45 84.4
Cc11_g02680 Coffea canephora HOM05D004259 ORTHO05D005014 5.5e-12 76.3 55 67.3
Gorai.011G153000 Gossypium raimondii HOM05D004259 ORTHO05D005014 5.5e-12 76.3 89 46.1
Gohir.D09G088725 Gossypium hirsutum HOM05D004259 ORTHO05D005014 6.0e-11 72.8 52 65.4
Sabra15G0136400 Salix brachista HOM05D004259 ORTHO05D004947 7.9e-11 72.4 68 60.3
Gohir.D09G037800 Gossypium hirsutum HOM05D004259 ORTHO05D005014 1.8e-07 61.2 56 62.5
Cc00_g00370 Coffea canephora HOM05D004259 ORTHO05D005014 1.5e-06 58.2 47 59.6
Aa31LG5G23020 Aethionema arabicum HOM05D004259 ORTHO05D005014 2.6e-06 57.4 48 58.3


User provided reference genes

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