Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00920 Aquilegia oxysepala HOM05D008307 ORTHO05D010374 0.0e+00 2043.1 1059 100.0
TAR365G0480 Trochodendron aralioides HOM05D008307 ORTHO05D010374 1.5e-89 335.5 1081 30.8
MBI07_g31095_MAGBIO Magnolia biondii HOM05D008307 ORTHO05D010374 1.1e-81 309.3 376 46.0
Dinv29844 Davidia involucrata HOM05D008307 ORTHO05D010374 3.6e-75 287.7 354 44.1
Haze_11405 Corylus avellana HOM05D008307 ORTHO05D010374 3.0e-74 284.6 370 43.5
QL06p018536 Quercus lobata HOM05D008307 ORTHO05D010374 1.5e-73 282.3 341 44.9
Cfa014722 Carpinus fangiana HOM05D008307 ORTHO05D010374 3.3e-73 281.2 372 44.1
Actinidia35796 Actinidia chinensis HOM05D008307 ORTHO05D010374 5.5e-68 263.8 356 40.2
Potri.010G070001 Populus trichocarpa HOM05D008307 ORTHO05D010374 1.6e-67 262.3 345 41.7
Rhsim04G0177000 Rhododendron simsii HOM05D008307 ORTHO05D010374 1.6e-67 262.3 355 43.1
RcHm_v2.0_Chr4g0393941 Rosa chinensis HOM05D008307 ORTHO05D010374 6.1e-67 260.4 332 45.2
TWI73G0959 Tripterygium wilfordii HOM05D008307 ORTHO05D010374 3.9e-66 257.7 343 43.4
FvH4_4g03920 Fragaria vesca HOM05D008307 ORTHO05D010374 7.4e-65 253.4 425 39.5
FAN22G1022 Fragaria x ananassa HOM05D000478 ORTHO05D010374 1.8e-63 248.8 313 46.0
MD16G1220900 Malus domestica HOM05D008307 ORTHO05D010374 1.8e-63 248.8 331 43.8
Solyc09g090290.3 Solanum lycopersicum HOM05D008307 ORTHO05D010374 5.0e-61 240.7 338 38.8
Sopen09g033190 Solanum pennellii HOM05D008307 ORTHO05D010374 5.0e-61 240.7 338 39.6
ATR0736G143 Amborella trichopoda HOM05D008307 ORTHO05D010374 1.5e-60 239.2 366 40.7
Peaxi162Scf00041g00209 Petunia axillaris HOM05D008307 ORTHO05D010374 9.4e-60 236.5 336 42.0
vmacro08510 Vaccinium macrocarpon HOM05D008307 ORTHO05D010374 4.7e-59 234.2 334 40.1
PGSC0003DMG400017215 Solanum tuberosum HOM05D008307 ORTHO05D010374 1.0e-58 233.0 338 39.1
CARHR099340 Cardamine hirsuta HOM05D008307 ORTHO05D010374 1.7e-56 225.7 285 43.9
THA.LOC104822237 Tarenaya hassleriana HOM05D008307 ORTHO05D010374 6.3e-56 223.8 328 36.9
Nitab4.5_0000044g0470 Nicotiana tabacum HOM05D008307 ORTHO05D010374 1.8e-55 222.2 364 37.4
FAN17G2370 Fragaria x ananassa HOM05D000478 ORTHO05D010374 5.3e-55 220.7 281 45.2
Migut.N00284 Erythranthe guttata HOM05D008307 ORTHO05D010374 1.3e-53 216.1 285 38.6
Thhalv10020149m.g Eutrema salsugineum HOM05D008307 ORTHO05D010374 2.2e-53 215.3 283 42.8
Nitab4.5_0007280g0010 Nicotiana tabacum HOM05D008307 ORTHO05D010374 2.9e-53 214.9 508 32.3
SEGI_00673 Sequoiadendron giganteum HOM05D008307 ORTHO05D010374 5.0e-53 214.2 302 40.1
CAN.G220.11 Capsicum annuum HOM05D008307 ORTHO05D010374 7.2e-52 210.3 480 31.5
DCAR_024261 Daucus carota HOM05D008307 ORTHO05D010374 1.0e-50 206.5 307 38.8
BraA07t28701Z Brassica rapa HOM05D008307 ORTHO05D010374 1.4e-50 206.1 309 37.5
CSS0044876 Camellia sinensis var. sinensis HOM05D008307 ORTHO05D010374 5.2e-50 204.1 230 48.3
COL.COLO4_15896 Corchorus olitorius HOM05D008307 ORTHO05D010374 5.2e-50 204.1 305 39.7
AL3G38030 Arabidopsis lyrata HOM05D008307 ORTHO05D010374 6.8e-50 203.8 285 40.7
A07p09070 Brassica napus HOM05D008307 ORTHO05D010374 6.8e-50 203.8 313 37.7
C07p14040 Brassica napus HOM05D008307 ORTHO05D010374 2.0e-49 202.2 313 36.7
BcaC06g35512 Brassica carinata HOM05D008307 ORTHO05D010374 3.4e-49 201.4 311 37.0
BolC7t41901H Brassica oleracea HOM05D008307 ORTHO05D010374 3.4e-49 201.4 313 36.7
AT3G23370 Arabidopsis thaliana HOM05D008307 ORTHO05D010374 4.4e-49 201.1 323 39.0
DCAR_027325 Daucus carota HOM05D008307 ORTHO05D010374 1.8e-47 195.7 357 35.3
PGR031G2080 Punica granatum HOM05D008307 ORTHO05D010374 2.7e-46 191.8 221 45.2
Carub.0003s2363 Capsella rubella HOM05D008307 ORTHO05D010374 4.4e-41 174.5 221 43.9
FAN12G4262 Fragaria x ananassa HOM05D000478 ORTHO05D010374 2.4e-39 168.7 194 50.5
SGA_v2.0_scaffold31G12662 Striga asiatica HOM05D008307 ORTHO05D010374 1.6e-38 166.0 312 33.0
Prupe.1G041400 Prunus persica HOM05D008307 ORTHO05D010374 1.5e-36 159.5 200 45.0
Gorai.011G175900 Gossypium raimondii HOM05D008307 ORTHO05D010374 4.7e-27 127.9 281 31.7
Thecc.04G258000 Theobroma cacao HOM05D008307 ORTHO05D010374 1.4e-26 126.3 230 33.9
Cc03_g05710 Coffea canephora HOM05D008307 ORTHO05D010374 6.8e-26 124.0 156 42.9
Gohir.D10G155880 Gossypium hirsutum HOM05D008307 ORTHO05D010374 4.4e-25 121.3 281 30.6
AagrBONN_evm.TU.Sc2ySwM_369.432 Anthoceros agrestis HOM05D008307 ORTHO05D010374 2.0e-22 112.5 332 28.9
Pp3c6_16530 Physcomitrium patens HOM05D008307 ORTHO05D010374 6.0e-22 110.9 322 27.6
SMO329G0060 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 6.6e-21 107.5 329 27.7
Cc03_g05700 Coffea canephora HOM05D008307 ORTHO05D010374 1.6e-19 102.8 170 35.9
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 2.3e-18 99.0 205 30.2
Pp3c5_17310 Physcomitrium patens HOM05D008307 ORTHO05D010374 6.4e-16 90.9 320 24.4
SMO165G0083 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 2.4e-15 89.0 204 30.4
Mapoly0004s0145 Marchantia polymorpha HOM05D008307 ORTHO05D010374 2.1e-14 85.9 287 26.5
ATR0706G029 Amborella trichopoda HOM05D008757 ORTHO05D010583 9.5e-12 77.0 216 28.7
TAR365G0134 Trochodendron aralioides HOM05D008757 ORTHO05D010583 5.2e-10 71.2 148 30.4
Thecc.04G258100 Theobroma cacao HOM05D008307 ORTHO05D010374 1.9e-07 62.8 63 42.9
Cfa005830 Carpinus fangiana HOM05D008757 ORTHO05D010583 2.1e-06 59.3 168 26.8
QL12p028983 Quercus lobata HOM05D008757 ORTHO05D010583 2.7e-06 58.9 152 30.3


User provided reference genes

Program Settings