Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 3.8e-144 515.0 292 100.0
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 6.8e-93 344.7 289 60.6
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 3.7e-91 339.0 291 67.7
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 3.1e-90 335.9 289 66.8
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 3.6e-86 322.4 290 56.2
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 1.8e-85 320.1 290 57.2
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 3.0e-85 319.3 291 56.7
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 1.2e-84 317.4 291 56.0
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 1.2e-84 317.4 291 56.0
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 4.4e-84 315.5 285 65.3
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 3.7e-83 312.4 288 55.9
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 4.9e-83 312.0 286 56.6
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 6.3e-83 311.6 292 55.5
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 1.8e-82 310.1 287 57.1
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 1.8e-82 310.1 289 57.8
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 3.1e-82 309.3 291 56.0
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 2.0e-81 306.6 289 55.7
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 3.5e-81 305.8 288 55.2
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 7.7e-81 304.7 289 53.3
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 1.0e-80 304.3 289 56.4
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 2.3e-80 303.1 290 62.8
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 2.9e-80 302.8 291 54.6
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 5.0e-80 302.0 289 57.4
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 1.5e-79 300.4 285 56.1
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 1.2e-78 297.4 287 54.4
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 1.2e-78 297.4 285 56.5
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 2.8e-78 296.2 290 54.8
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 3.6e-78 295.8 289 61.9
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 6.1e-78 295.0 289 57.1
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 8.0e-78 294.7 288 55.2
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 1.8e-77 293.5 288 54.2
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 3.0e-77 292.7 287 54.4
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 4.0e-77 292.4 292 54.8
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 8.9e-77 291.2 287 55.4
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 2.0e-76 290.0 287 53.7
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 4.4e-76 288.9 286 62.6
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 5.7e-76 288.5 286 62.6
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 1.7e-75 287.0 287 53.7
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 1.7e-75 287.0 290 53.8
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 2.2e-75 286.6 289 54.0
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 2.2e-75 286.6 289 54.0
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 3.7e-75 285.8 287 53.3
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 4.1e-74 282.3 286 64.0
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 2.0e-73 280.0 287 53.7
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 2.0e-73 280.0 286 54.2
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 2.7e-73 279.6 288 52.8
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 3.5e-73 279.3 287 51.6
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 4.6e-73 278.9 288 53.5
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 1.0e-72 277.7 289 59.2
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 1.3e-72 277.3 287 51.9
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 5.0e-72 275.4 289 61.6
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 8.6e-72 274.6 268 56.3
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 1.1e-71 274.2 285 52.3
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 2.5e-71 273.1 289 50.9
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 4.3e-71 272.3 289 63.0
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 7.3e-71 271.6 288 58.3
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 1.6e-70 270.4 286 52.8
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 8.0e-70 268.1 289 61.9
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 8.0e-70 268.1 289 61.9
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 1.4e-69 267.3 288 50.7
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 2.3e-69 266.5 288 53.8
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 3.1e-69 266.2 288 51.0
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 9.8e-68 261.2 290 61.4
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 6.4e-67 258.5 284 47.9
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 2.7e-65 253.1 299 47.5
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 2.5e-63 246.5 285 47.7
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 7.3e-63 245.0 294 57.5
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 1.2e-62 244.2 313 45.4
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 2.1e-62 243.4 308 45.5
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 8.1e-62 241.5 262 51.9
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 4.4e-60 235.7 242 53.3
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 9.8e-60 234.6 245 53.1
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 4.9e-59 232.3 241 53.5
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 4.9e-59 232.3 275 48.7
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.9e-59 232.3 289 57.8
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 8.3e-59 231.5 279 47.7
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 1.1e-58 231.1 288 47.2
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 9.2e-58 228.0 293 42.0
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 1.1e-55 221.1 244 51.2
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 1.8e-53 213.8 246 50.0
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 5.2e-53 212.2 259 47.5
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 8.9e-53 211.5 307 48.9
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 1.3e-51 207.6 245 48.2
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 1.3e-48 197.6 286 51.0
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 1.3e-48 197.6 250 48.4
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 3.3e-47 193.0 299 45.8
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.6e-46 190.7 289 47.1
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.8e-46 189.9 289 51.9
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 1.5e-39 167.5 110 73.6
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 7.3e-39 165.2 292 34.9
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 2.8e-38 163.3 240 52.1
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 9.0e-37 158.3 133 61.7
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 2.0e-36 157.1 254 40.9
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 1.6e-33 147.5 122 55.7
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 3.5e-33 146.4 215 40.5
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 6.0e-33 145.6 120 57.5
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 1.8e-32 144.1 122 54.9
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 3.9e-32 142.9 133 58.6
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 5.1e-32 142.5 95 72.6
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 8.7e-32 141.7 124 59.7
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 8.7e-32 141.7 124 59.7
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 8.7e-32 141.7 126 59.5
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 1.9e-31 140.6 124 58.9
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 4.3e-31 139.4 124 58.1
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 7.4e-31 138.7 212 42.0
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 1.3e-30 137.9 212 41.0
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 1.3e-30 137.9 182 45.6
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 8.1e-30 135.2 136 51.5
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 6.9e-29 132.1 220 39.5
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 9.0e-29 131.7 69 84.1
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 7.6e-28 128.6 226 35.4
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 3.8e-27 126.3 101 62.4
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.1e-25 120.6 133 54.1
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 5.5e-18 95.9 124 46.8
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 1.3e-14 84.7 86 53.5
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 6.9e-13 79.0 79 53.2
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 2.9e-11 73.6 75 53.3
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 3.8e-11 73.2 109 42.2
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 1.9e-10 70.9 47 70.2
Lj4g0011716 Lotus japonicus HOM05D000903 ORTHO05D000731 3.7e-06 56.6 89 36.0
TWI73G0176 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 6.3e-06 55.8 76 36.8
Cfa003465 Carpinus fangiana HOM05D000903 ORTHO05D000731 8.2e-06 55.5 111 31.5


User provided reference genes

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