Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 1.8e-155 552.7 279 100.0
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 3.2e-80 302.8 243 61.3
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 5.9e-74 282.0 262 53.8
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 5.9e-74 282.0 262 53.8
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 7.7e-74 281.6 262 53.8
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 1.0e-73 281.2 268 52.6
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 2.2e-73 280.0 267 56.2
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 1.9e-72 276.9 266 56.0
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 5.5e-72 275.4 287 51.6
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 1.6e-71 273.9 244 55.3
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 1.6e-71 273.9 266 52.3
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 2.1e-71 273.5 277 51.6
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 3.6e-71 272.7 286 50.0
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 8.8e-70 268.1 286 49.3
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 1.5e-69 267.3 246 52.0
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 2.6e-69 266.5 262 52.3
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 3.3e-69 266.2 265 53.6
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 4.4e-69 265.8 263 52.5
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 7.5e-69 265.0 243 53.5
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 9.7e-69 264.6 269 50.9
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 9.7e-69 264.6 285 50.9
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 3.7e-68 262.7 267 52.4
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 8.2e-68 261.5 262 50.8
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 8.2e-68 261.5 271 53.5
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 1.8e-67 260.4 268 51.5
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 1.8e-67 260.4 282 50.0
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 1.8e-67 260.4 267 52.8
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 4.1e-67 259.2 278 49.6
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 5.3e-67 258.8 308 48.1
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 5.3e-67 258.8 308 48.1
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 7.0e-67 258.5 281 50.2
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 1.2e-66 257.7 277 49.1
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 1.2e-66 257.7 267 49.8
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 2.0e-66 256.9 270 52.2
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 3.5e-66 256.1 271 49.8
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 4.5e-66 255.8 281 50.2
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 5.9e-66 255.4 243 52.7
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 7.7e-66 255.0 282 50.4
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 2.2e-65 253.4 270 51.1
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 6.5e-65 251.9 274 49.6
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 6.5e-65 251.9 228 54.8
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 1.1e-64 251.1 271 49.4
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 1.1e-64 251.1 273 49.1
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 2.5e-64 250.0 271 50.6
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 2.5e-64 250.0 261 49.8
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 4.2e-64 249.2 243 49.8
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 1.2e-63 247.7 268 52.6
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 1.6e-63 247.3 226 55.8
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 2.1e-63 246.9 268 52.6
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 2.7e-63 246.5 266 50.4
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 3.6e-63 246.1 239 51.0
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 4.7e-63 245.7 269 50.2
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 8.0e-63 245.0 267 52.8
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 4.0e-62 242.7 258 53.1
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 1.5e-61 240.7 263 52.1
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 1.5e-61 240.7 262 50.8
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 2.6e-61 240.0 282 46.1
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 4.4e-61 239.2 247 51.4
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 4.4e-61 239.2 243 48.1
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 2.2e-60 236.9 269 46.5
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 2.2e-60 236.9 269 46.5
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 2.8e-60 236.5 235 54.0
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 6.3e-60 235.3 273 49.1
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 8.3e-60 235.0 225 55.1
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 1.4e-59 234.2 242 49.6
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 1.8e-59 233.8 246 51.6
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 1.8e-59 233.8 278 45.7
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 3.1e-59 233.0 281 45.6
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 7.0e-59 231.9 278 49.6
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 2.0e-58 230.3 234 50.4
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 3.5e-58 229.6 184 61.4
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 1.7e-57 227.3 274 45.3
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 2.9e-57 226.5 240 50.4
Zm00001eb071860 Zea mays HOM05D005964 ORTHO05D007242 5.0e-57 225.7 261 47.1
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 6.5e-57 225.3 273 45.4
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 1.1e-56 224.6 247 49.4
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 4.2e-56 222.6 202 54.0
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 9.5e-56 221.5 242 47.5
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 2.1e-55 220.3 165 63.6
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 2.1e-55 220.3 263 47.9
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 3.6e-55 219.5 270 43.7
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 1.0e-54 218.0 269 45.0
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 1.4e-54 217.6 237 46.0
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 2.3e-54 216.9 272 42.6
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 5.2e-54 215.7 258 45.7
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 6.8e-54 215.3 161 62.1
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 8.8e-54 214.9 258 44.6
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 1.2e-53 214.5 222 52.3
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 2.0e-53 213.8 273 44.0
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 2.0e-53 213.8 241 44.4
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 4.4e-53 212.6 172 61.6
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 2.2e-52 210.3 265 41.9
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 2.2e-52 210.3 271 41.7
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 3.7e-52 209.5 177 61.6
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 8.3e-52 208.4 212 51.9
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 4.1e-51 206.1 176 55.7
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 1.2e-50 204.5 286 42.0
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 1.2e-50 204.5 373 35.4
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 1.6e-50 204.1 281 40.6
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 1.6e-50 204.1 281 40.6
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 5.9e-50 202.2 170 55.3
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 1.0e-49 201.4 283 39.9
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 1.0e-49 201.4 283 39.9
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 1.0e-49 201.4 256 44.1
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 2.9e-49 199.9 176 58.5
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 2.8e-47 193.4 317 39.1
THA.LOC104806194 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 3.6e-47 193.0 222 47.3
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 6.1e-47 192.2 199 50.8
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 1.7e-44 184.1 283 38.5
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 6.4e-44 182.2 147 54.4
ClCG10G001030 Citrullus lanatus HOM05D005964 ORTHO05D007242 2.0e-42 177.2 268 40.3
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 3.0e-41 173.3 258 39.5
PSO717G0022 Papaver somniferum HOM05D005964 ORTHO05D007242 9.8e-37 158.3 141 54.6
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 1.4e-35 154.5 239 41.0
HPP92_021116 Vanilla planifolia HOM05D005964 ORTHO05D007242 2.4e-35 153.7 189 41.3
C07p50270 Brassica napus HOM05D005964 ORTHO05D007242 2.7e-34 150.2 273 37.0
A03p51750 Brassica napus HOM05D005964 ORTHO05D007242 1.3e-33 147.9 254 36.2
PGSC0003DMG400030871 Solanum tuberosum HOM05D005964 ORTHO05D007242 2.3e-33 147.1 179 46.4
Mapoly0153s0025 Marchantia polymorpha HOM05D005964 ORTHO05D007242 2.2e-28 130.6 140 47.9
Cpa.g.sc90.42 Carica papaya HOM05D005964 ORTHO05D007242 2.3e-25 120.6 83 61.4
Pp3c6_11480 Physcomitrium patens HOM05D005964 ORTHO05D007242 2.3e-25 120.6 234 30.8
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis HOM05D005964 ORTHO05D007242 1.9e-16 90.9 125 38.4
CBR_g24057 Chara braunii HOM05D005964 ORTHO05D007242 2.0e-13 80.9 109 39.4
Cpa.g.sc90.41 Carica papaya HOM05D005964 ORTHO05D007242 1.3e-12 78.2 44 79.5
Haze_08067 Corylus avellana HOM05D005964 ORTHO05D007242 6.0e-10 69.3 106 36.8
Haze_05991 Corylus avellana HOM05D005964 ORTHO05D007242 1.5e-08 64.7 144 34.0
Cpa.g.c47778 Carica papaya HOM05D005964 ORTHO05D007242 9.6e-08 62.0 41 58.5
Oeu042210.1 Olea europaea HOM05D005964 ORTHO05D007242 5.3e-06 56.2 50 52.0
AL8G21390 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 6.9e-06 55.8 119 31.1


User provided reference genes

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