Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 6.9e-84 314.7 269 100.0
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 1.5e-41 174.1 268 65.7
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 3.5e-35 152.9 254 66.9
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 1.7e-34 150.6 261 65.1
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 4.2e-33 146.0 264 63.6
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 4.2e-33 146.0 254 66.1
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 9.5e-33 144.8 268 61.6
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 2.1e-32 143.7 269 64.7
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 2.1e-32 143.7 268 63.8
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 5.2e-31 139.0 270 61.5
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 8.8e-31 138.3 269 61.0
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 1.2e-30 137.9 269 62.8
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 2.0e-30 137.1 253 64.0
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 3.4e-30 136.3 267 61.8
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 4.4e-30 136.0 267 61.4
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 7.5e-30 135.2 270 60.7
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 4.9e-29 132.5 273 60.1
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 6.3e-29 132.1 268 62.3
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 6.3e-29 132.1 253 64.4
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 1.1e-28 131.3 267 61.0
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 1.4e-28 131.0 267 60.7
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 1.4e-28 131.0 289 59.9
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 1.4e-28 131.0 269 62.8
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 1.8e-28 130.6 270 60.7
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 2.4e-28 130.2 281 60.5
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 2.4e-28 130.2 80 75.0
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 4.1e-28 129.4 270 59.6
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 5.4e-28 129.0 268 62.3
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 5.4e-28 129.0 267 60.7
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 7.0e-28 128.6 253 63.2
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 9.2e-28 128.3 268 59.3
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 4.5e-27 125.9 276 48.2
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 4.5e-27 125.9 255 61.6
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 5.9e-27 125.6 266 60.9
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 7.8e-27 125.2 268 61.2
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 1.7e-26 124.0 266 62.4
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 2.9e-26 123.2 279 60.6
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 3.8e-26 122.9 71 80.3
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 5.0e-26 122.5 263 61.6
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 6.6e-26 122.1 75 74.7
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 1.5e-25 120.9 260 59.6
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 1.5e-25 120.9 76 77.6
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 1.9e-25 120.6 265 61.5
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 3.3e-25 119.8 268 60.4
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 4.3e-25 119.4 272 59.6
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 4.3e-25 119.4 266 57.9
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 4.3e-25 119.4 81 74.1
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 9.5e-25 118.2 69 81.2
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 1.2e-24 117.9 84 69.0
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 1.6e-24 117.5 78 76.9
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 2.1e-24 117.1 67 83.6
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 2.8e-24 116.7 76 76.3
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 2.8e-24 116.7 254 61.0
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.6e-24 116.3 254 61.4
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 4.7e-24 115.9 74 77.0
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 6.1e-24 115.5 80 75.0
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 6.1e-24 115.5 80 75.0
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 6.1e-24 115.5 82 72.0
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 6.1e-24 115.5 260 59.2
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 6.1e-24 115.5 254 61.0
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 8.0e-24 115.2 67 83.6
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 8.0e-24 115.2 266 60.2
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 8.0e-24 115.2 76 75.0
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 8.0e-24 115.2 267 61.8
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 1.0e-23 114.8 76 75.0
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 1.0e-23 114.8 76 75.0
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 1.0e-23 114.8 76 75.0
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 1.0e-23 114.8 73 74.0
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 1.4e-23 114.4 67 82.1
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 1.4e-23 114.4 67 82.1
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 1.4e-23 114.4 267 56.6
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 2.3e-23 113.6 255 62.4
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 3.0e-23 113.2 67 80.6
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 4.0e-23 112.8 80 73.8
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 4.0e-23 112.8 254 61.0
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 4.0e-23 112.8 255 62.4
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 5.2e-23 112.5 260 59.6
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 5.2e-23 112.5 250 60.8
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 6.8e-23 112.1 256 62.1
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 6.8e-23 112.1 266 58.6
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 8.9e-23 111.7 255 62.0
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 8.9e-23 111.7 275 59.3
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 1.2e-22 111.3 256 60.2
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 1.2e-22 111.3 74 74.3
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 1.5e-22 110.9 304 55.3
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 2.6e-22 110.2 72 73.6
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 4.4e-22 109.4 263 55.5
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 7.5e-22 108.6 78 71.8
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 7.5e-22 108.6 67 79.1
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 1.3e-21 107.8 70 78.6
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 4.9e-21 105.9 80 68.8
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 6.4e-21 105.5 74 70.3
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 2.7e-19 100.1 254 59.8
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 3.0e-18 96.7 81 58.0
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 1.5e-17 94.4 71 69.0
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 3.3e-17 93.2 271 45.4
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 1.2e-16 91.3 77 63.6
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 1.2e-16 91.3 88 56.8
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 2.8e-16 90.1 253 56.5
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 1.1e-15 88.2 62 74.2
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 2.6e-14 83.6 62 69.4
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 2.6e-14 83.6 67 58.2
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 5.8e-14 82.4 219 62.1
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 9.8e-14 81.6 274 56.6
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 9.8e-14 81.6 271 60.9
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 6.4e-13 79.0 54 63.0
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 4.1e-12 76.3 399 40.9
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 1.0e-10 71.6 110 43.6
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.9e-10 69.7 220 59.5
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 1.1e-09 68.2 80 56.2
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 4.7e-08 62.8 44 61.4
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 6.2e-08 62.4 33 81.8
Gohir.D08G138080 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.2e-06 58.2 35 77.1
Gorai.004G141500 Gossypium raimondii HOM05D006475 ORTHO05D007969 1.5e-06 57.8 35 77.1
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 2.6e-06 57.0 219 26.0
Sc07g0008230 Simmondsia chinensis HOM05D006475 ORTHO05D007969 5.8e-06 55.8 33 75.8


User provided reference genes

Program Settings