Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 1.9e-98 362.5 181 100.0
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 5.4e-48 194.9 139 69.1
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 3.5e-47 192.2 138 68.8
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 4.5e-47 191.8 141 68.1
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 3.8e-46 188.7 137 67.9
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 3.8e-46 188.7 147 66.7
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 3.8e-46 188.7 138 66.7
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 8.6e-46 187.6 135 69.6
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 8.6e-46 187.6 139 65.5
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 1.1e-45 187.2 139 66.2
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 1.9e-45 186.4 142 63.4
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 3.3e-45 185.7 139 66.2
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 3.3e-45 185.7 139 66.2
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 5.5e-45 184.9 136 66.2
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 7.2e-45 184.5 143 60.8
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 1.6e-44 183.3 139 65.5
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.6e-44 183.3 139 63.3
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 2.1e-44 183.0 139 65.5
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 4.7e-44 181.8 139 62.6
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 6.1e-44 181.4 132 68.9
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 8.0e-44 181.0 139 64.0
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 1.0e-43 180.6 139 64.7
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 1.4e-43 180.3 139 64.7
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 1.4e-43 180.3 139 61.2
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 1.8e-43 179.9 139 64.0
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 1.8e-43 179.9 139 61.2
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 1.8e-43 179.9 126 67.5
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 2.3e-43 179.5 135 66.7
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 3.0e-43 179.1 138 65.2
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 3.0e-43 179.1 132 65.2
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 3.0e-43 179.1 139 62.6
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 4.0e-43 178.7 143 61.5
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 4.0e-43 178.7 140 63.6
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 4.0e-43 178.7 132 65.2
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 4.0e-43 178.7 132 65.9
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 4.0e-43 178.7 139 63.3
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 5.2e-43 178.3 132 66.7
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 5.2e-43 178.3 138 63.8
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 5.2e-43 178.3 139 61.2
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 6.8e-43 177.9 139 64.0
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.2e-42 177.2 139 61.2
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 1.2e-42 177.2 141 61.7
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 2.0e-42 176.4 139 61.2
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 5.7e-42 174.9 136 62.5
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 7.5e-42 174.5 140 60.0
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 9.8e-42 174.1 134 62.7
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 9.8e-42 174.1 132 62.1
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 9.8e-42 174.1 134 59.0
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 1.3e-41 173.7 141 62.4
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 2.8e-41 172.6 134 59.0
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 3.7e-41 172.2 142 60.6
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 4.9e-41 171.8 131 63.4
COL.COLO4_19775 Corchorus olitorius HOM05D002799 ORTHO05D008889 6.3e-41 171.4 132 63.6
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 8.3e-41 171.0 132 63.6
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 1.1e-40 170.6 133 65.4
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 1.1e-40 170.6 132 61.4
THA.LOC104803694 Tarenaya hassleriana HOM05D002799 ORTHO05D008889 1.1e-40 170.6 138 60.9
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 1.8e-40 169.9 132 63.6
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 1.8e-40 169.9 140 59.3
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 2.4e-40 169.5 134 56.7
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 4.1e-40 168.7 132 63.6
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 9.2e-40 167.5 132 62.9
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 1.2e-39 167.2 134 58.2
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 4.5e-39 165.2 138 58.0
Ca_14681_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 7.8e-39 164.5 130 59.2
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 1.0e-38 164.1 138 55.1
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 2.9e-38 162.5 138 54.3
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 2.9e-38 162.5 143 57.3
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 5.0e-38 161.8 136 57.4
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 5.0e-38 161.8 140 57.9
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 1.1e-37 160.6 138 56.5
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 1.1e-37 160.6 138 56.5
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 1.1e-37 160.6 138 56.5
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 1.1e-37 160.6 138 56.5
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 1.5e-37 160.2 134 56.0
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 1.5e-37 160.2 157 56.1
BcaB07g31750 Brassica carinata HOM05D002799 ORTHO05D008889 1.9e-37 159.8 136 57.4
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 2.5e-37 159.5 138 55.8
Psat4g127040 Pisum sativum HOM05D002799 ORTHO05D008889 2.5e-37 159.5 130 56.9
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 7.3e-37 157.9 133 61.7
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 7.3e-37 157.9 129 62.0
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 9.5e-37 157.5 157 55.4
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 9.5e-37 157.5 132 57.6
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 1.2e-36 157.1 140 55.7
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 2.8e-36 156.0 123 59.3
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 3.6e-36 155.6 136 55.1
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 6.1e-36 154.8 138 55.1
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 6.1e-36 154.8 137 57.7
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 1.8e-35 153.3 137 54.7
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 2.3e-35 152.9 138 52.2
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 2.3e-35 152.9 138 55.8
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 5.2e-35 151.8 136 54.4
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 5.2e-35 151.8 138 53.6
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 6.8e-35 151.4 132 54.5
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 6.8e-35 151.4 138 55.1
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 9.2e-32 141.0 102 70.6
PSO675G4133 Papaver somniferum HOM05D002799 ORTHO05D008889 6.6e-30 134.8 158 48.7
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 8.6e-30 134.4 157 47.1
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 4.3e-29 132.1 96 63.5
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 6.8e-27 124.8 141 46.1
SHI03438 Sapria himalayana HOM05D002799 ORTHO05D008889 9.8e-26 120.9 128 48.4
HPP92_002455 Vanilla planifolia HOM05D002799 ORTHO05D008889 1.6e-23 113.6 114 49.1
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 7.8e-23 111.3 161 42.2
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 1.7e-22 110.2 139 43.2
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 3.6e-20 102.4 140 44.3
BcaB03g16409 Brassica carinata HOM05D002799 ORTHO05D008889 7.5e-18 94.7 107 46.7
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 2.1e-15 86.7 62 62.9
C07p06790 Brassica napus HOM05D002799 ORTHO05D008889 1.2e-12 77.4 72 52.8
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 1.2e-12 77.4 113 40.7
HanXRQChr10g0305151 Helianthus annuus HOM05D002799 ORTHO05D008889 1.1e-11 74.3 48 70.8
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 7.6e-10 68.2 140 30.0
PRCOL_00003203 Prasinoderma coloniale HOM05D002799 ORTHO05D008889 6.4e-09 65.1 142 33.8
Cfa026682 Carpinus fangiana HOM05D002799 ORTHO05D008889 8.4e-09 64.7 112 38.4
Ca_28676_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 8.4e-09 64.7 103 37.9


User provided reference genes

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