Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 9.6e-217 756.5 376 100.0
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 8.3e-144 514.2 308 82.5
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 5.6e-140 501.5 304 83.2
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 7.3e-140 501.1 301 82.1
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 1.2e-139 500.4 306 80.7
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 3.6e-139 498.8 296 83.1
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 3.1e-138 495.7 313 78.6
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 3.1e-138 495.7 296 83.1
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 4.0e-138 495.4 303 81.2
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 2.6e-137 492.7 296 82.4
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 4.4e-137 491.9 296 80.4
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.3e-136 490.3 296 81.4
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 1.3e-136 490.3 337 73.9
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.9e-136 489.2 296 81.4
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 2.9e-136 489.2 296 81.8
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 3.7e-136 488.8 325 76.3
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 4.9e-136 488.4 305 80.0
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 5.4e-135 485.0 301 79.7
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 7.0e-135 484.6 306 78.8
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 9.2e-135 484.2 296 81.8
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 2.7e-134 482.6 296 79.1
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 2.7e-134 482.6 296 80.7
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 3.5e-134 482.3 301 79.1
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 4.6e-134 481.9 296 79.1
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 1.3e-133 480.3 306 78.1
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 2.3e-133 479.6 306 78.1
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 2.3e-133 479.6 306 78.1
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 3.0e-133 479.2 313 76.7
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 3.9e-133 478.8 345 72.5
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 5.0e-133 478.4 302 78.5
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 6.6e-133 478.0 309 78.0
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 1.1e-132 477.2 320 75.3
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 1.9e-132 476.5 297 79.5
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 7.3e-132 474.6 309 76.7
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 9.5e-132 474.2 309 76.7
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 9.5e-132 474.2 317 75.4
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 1.6e-131 473.4 295 77.6
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 2.1e-131 473.0 309 77.0
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 2.8e-131 472.6 302 80.1
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 3.6e-131 472.2 303 75.9
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 4.7e-131 471.9 329 72.6
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 4.7e-131 471.9 337 71.8
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 4.7e-131 471.9 301 78.4
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 6.2e-131 471.5 300 78.7
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 6.2e-131 471.5 338 71.6
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 1.1e-130 470.7 303 75.9
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.8e-130 469.9 329 72.3
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 1.8e-130 469.9 295 77.6
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.8e-130 469.9 309 75.7
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 1.8e-130 469.9 302 79.8
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 4.0e-130 468.8 295 78.0
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 6.8e-130 468.0 296 76.7
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 8.9e-130 467.6 302 76.2
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 2.0e-129 466.5 296 77.0
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 2.6e-129 466.1 284 81.0
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 2.6e-129 466.1 299 77.3
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 2.6e-129 466.1 299 77.3
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 4.4e-129 465.3 319 74.6
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 5.8e-129 464.9 302 74.8
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 7.5e-129 464.5 296 77.7
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 9.8e-129 464.2 294 77.9
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 8.3e-128 461.1 313 74.1
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 1.4e-127 460.3 306 74.5
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 2.4e-127 459.5 299 74.9
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.2e-127 459.1 308 75.6
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 7.1e-127 458.0 293 77.1
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 7.1e-127 458.0 293 78.5
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.2e-126 457.2 302 74.8
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.6e-126 456.8 332 70.5
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 2.1e-126 456.4 302 74.8
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 4.6e-126 455.3 285 78.2
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 4.6e-126 455.3 306 73.9
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 6.0e-126 454.9 325 72.0
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 6.0e-126 454.9 299 74.6
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 7.8e-126 454.5 279 79.6
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 1.0e-125 454.1 307 73.6
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 1.0e-125 454.1 294 76.5
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 3.9e-125 452.2 294 76.5
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 3.3e-124 449.1 290 74.5
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 3.6e-123 445.7 295 73.2
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 8.9e-122 441.0 292 75.0
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 7.6e-121 438.0 280 77.9
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 8.4e-120 434.5 299 72.9
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.1e-119 434.1 277 77.3
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 3.2e-119 432.6 286 74.8
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 3.2e-119 432.6 286 74.8
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 4.1e-119 432.2 309 71.2
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 4.3e-116 422.2 280 74.3
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 5.6e-116 421.8 290 74.1
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 9.6e-116 421.0 263 78.3
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 1.2e-115 420.6 278 74.1
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 3.6e-115 419.1 295 71.2
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 4.7e-115 418.7 301 69.4
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 5.2e-114 415.2 261 78.9
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 6.8e-114 414.8 282 74.8
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 6.8e-114 414.8 264 79.9
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.3e-112 410.6 311 67.2
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.7e-112 410.2 254 78.3
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 2.9e-112 409.5 275 74.5
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 4.6e-110 402.1 278 71.9
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 3.4e-105 386.0 278 70.9
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 2.4e-103 379.8 294 61.9
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 2.7e-102 376.3 293 67.9
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 1.0e-101 374.4 277 70.8
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.1e-100 370.9 236 79.7
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 1.4e-98 364.0 298 60.1
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 1.5e-97 360.5 269 66.5
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 1.7e-96 357.1 297 59.6
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 6.7e-93 345.1 292 57.9
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 4.3e-92 342.4 277 66.1
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 3.3e-84 316.2 232 65.5
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 4.3e-84 315.8 294 54.1
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 2.8e-83 313.2 220 71.8
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 5.3e-82 308.9 197 75.6
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 6.5e-80 302.0 201 71.6
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 1.1e-76 291.2 235 65.5
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 1.0e-69 268.1 347 42.9
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 6.7e-53 212.2 140 76.4
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 9.7e-52 208.4 172 64.0
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.2e-49 201.4 143 69.9
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 5.7e-44 182.6 129 72.1
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 7.5e-44 182.2 310 37.1
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 5.9e-41 172.6 107 71.0
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 3.0e-37 160.2 261 39.5
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.3e-29 134.0 96 67.7
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 3.4e-20 103.6 93 57.0
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 6.0e-17 92.8 82 53.7
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 1.2e-12 78.6 51 80.4


User provided reference genes

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