Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00859 Aquilegia oxysepala HOM05D005903 ORTHO05D007293 3.5e-191 671.4 326 100.0
Nn7g38356 Nelumbo nucifera HOM05D005903 ORTHO05D007293 1.7e-124 449.9 329 67.5
TAR624G0428 Trochodendron aralioides HOM05D005903 ORTHO05D007293 7.0e-123 444.5 321 69.5
Dinv07001 Davidia involucrata HOM05D005903 ORTHO05D007293 5.0e-121 438.3 328 64.9
Nitab4.5_0010610g0030 Nicotiana tabacum HOM05D005903 ORTHO05D007293 1.2e-119 433.7 327 64.5
CiPaw.09G138500 Carya illinoinensis HOM05D005903 ORTHO05D007293 1.8e-118 429.9 328 64.0
Thecc.02G003100 Theobroma cacao HOM05D005903 ORTHO05D007293 2.3e-118 429.5 319 65.5
ClCG01G025750 Citrullus lanatus HOM05D005903 ORTHO05D007293 4.0e-118 428.7 329 64.7
PGR044G2521 Punica granatum HOM05D005903 ORTHO05D007293 5.2e-118 428.3 331 63.7
GSVIVG01012154001 Vitis vinifera HOM05D005903 ORTHO05D007293 1.2e-117 427.2 321 66.7
Medtr4g094760 Medicago truncatula HOM05D005903 ORTHO05D007293 2.0e-117 426.4 326 63.2
Hma1.2p1_0088F.1_g045276 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 2.6e-117 426.0 321 66.0
TPR.G23817 Trifolium pratense HOM05D005903 ORTHO05D007293 2.6e-117 426.0 326 64.1
QL11p012010 Quercus lobata HOM05D005903 ORTHO05D007293 3.4e-117 425.6 319 65.8
Nitab4.5_0000844g0290 Nicotiana tabacum HOM05D005903 ORTHO05D007293 2.2e-116 422.9 315 64.8
Potri.001G076200 Populus trichocarpa HOM05D005903 ORTHO05D007293 2.4e-115 419.5 319 64.3
CsaV3_6G052990 Cucumis sativus L. HOM05D005903 ORTHO05D007293 3.1e-115 419.1 329 63.5
Cpa.g.sc30.99 Carica papaya HOM05D005903 ORTHO05D007293 5.4e-115 418.3 327 62.7
Eucgr.A00192 Eucalyptus grandis HOM05D005903 ORTHO05D007293 5.4e-115 418.3 321 63.2
PGSC0003DMG400007316 Solanum tuberosum HOM05D005903 ORTHO05D007293 7.0e-115 417.9 318 64.2
Atru.chr10.296 Acer truncatum HOM05D005903 ORTHO05D007293 9.2e-115 417.5 321 63.9
Thhalv10011094m.g Eutrema salsugineum HOM05D005903 ORTHO05D007293 9.2e-115 417.5 321 63.9
AT3G47630 Arabidopsis thaliana HOM05D005903 ORTHO05D007293 1.2e-114 417.2 321 64.2
PSO675G2427 Papaver somniferum HOM05D005903 ORTHO05D007293 2.0e-114 416.4 328 61.9
Gohir.D11G050900 Gossypium hirsutum HOM05D005903 ORTHO05D007293 2.7e-114 416.0 321 63.9
CAN.G809.52 Capsicum annuum HOM05D005903 ORTHO05D007293 4.5e-114 415.2 327 62.7
Manes.03G070940 Manihot esculenta HOM05D005903 ORTHO05D007293 4.5e-114 415.2 319 63.6
Carub.0005s1376 Capsella rubella HOM05D005903 ORTHO05D007293 5.9e-114 414.8 321 63.2
MELO3C007010.2 Cucumis melo HOM05D005903 ORTHO05D007293 5.9e-114 414.8 329 62.3
Gohir.A11G047300 Gossypium hirsutum HOM05D005903 ORTHO05D007293 5.9e-114 414.8 321 63.6
Gorai.007G055300 Gossypium raimondii HOM05D005903 ORTHO05D007293 7.8e-114 414.5 321 63.6
FAN11G1857 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.3e-113 413.7 320 62.8
Solyc02g081840.4 Solanum lycopersicum HOM05D005903 ORTHO05D007293 1.7e-113 413.3 318 63.5
FAN16G3015 Fragaria x ananassa HOM05D005903 ORTHO05D007293 2.9e-113 412.5 320 62.5
FvH4_3g13050 Fragaria vesca HOM05D005903 ORTHO05D007293 3.8e-113 412.1 320 62.5
FAN21G0687 Fragaria x ananassa HOM05D005903 ORTHO05D007293 6.6e-113 411.4 320 62.2
BraA06t25085Z Brassica rapa HOM05D005903 ORTHO05D007293 8.6e-113 411.0 321 63.2
BolC3t19474H Brassica oleracea HOM05D005903 ORTHO05D007293 1.1e-112 410.6 321 63.2
CANSAT35G1866 Cannabis sativa HOM05D005903 ORTHO05D007293 1.5e-112 410.2 331 61.6
EL10Ac5g11217 Beta vulgaris HOM05D005903 ORTHO05D007293 2.5e-112 409.5 323 59.8
BcaC01g01793 Brassica carinata HOM05D005903 ORTHO05D007293 3.3e-112 409.1 321 62.9
C03p71840 Brassica napus HOM05D005903 ORTHO05D007293 3.3e-112 409.1 321 62.9
BcaC07g40489 Brassica carinata HOM05D005903 ORTHO05D007293 5.6e-112 408.3 330 62.1
A06p19990 Brassica napus HOM05D005903 ORTHO05D007293 5.6e-112 408.3 321 62.9
AUR62036920 Chenopodium quinoa HOM05D005903 ORTHO05D007293 7.3e-112 407.9 323 61.0
C08p34580 Brassica napus HOM05D005903 ORTHO05D007293 9.5e-112 407.5 330 61.8
BolC8t51059H Brassica oleracea HOM05D005903 ORTHO05D007293 9.5e-112 407.5 321 62.6
AL5G26920 Arabidopsis lyrata HOM05D005903 ORTHO05D007293 1.2e-111 407.1 324 61.7
vmacro03560 Vaccinium macrocarpon HOM05D005903 ORTHO05D007293 1.2e-111 407.1 337 60.2
Ca_18231_v3 Cicer arietinum L. HOM05D005903 ORTHO05D007293 1.6e-111 406.8 328 61.3
FAN25G2454 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.6e-111 406.8 320 61.9
Aa31LG9G16250 Aethionema arabicum HOM05D005903 ORTHO05D007293 2.1e-111 406.4 321 62.6
Migut.M02015 Erythranthe guttata HOM05D005903 ORTHO05D007293 3.6e-111 405.6 322 63.0
Sp1g31680 Schrenkiella parvula HOM05D005903 ORTHO05D007293 3.6e-111 405.6 322 60.9
CARHR156310 Cardamine hirsuta HOM05D005903 ORTHO05D007293 6.1e-111 404.8 321 61.7
Sed0025041 Sechium edule HOM05D005903 ORTHO05D007293 6.1e-111 404.8 319 63.3
THA.LOC104812245 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 6.1e-111 404.8 360 58.3
THA.LOC104824626 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 6.1e-111 404.8 360 58.6
Glyma.05G134300 Glycine max HOM05D005903 ORTHO05D007293 1.4e-110 403.7 326 60.1
HanXRQChr12g0369311 Helianthus annuus HOM05D005903 ORTHO05D007293 1.8e-110 403.3 326 60.7
RcHm_v2.0_Chr5g0021241 Rosa chinensis HOM05D005903 ORTHO05D007293 1.8e-110 403.3 320 60.9
Lj4g0014401 Lotus japonicus HOM05D005903 ORTHO05D007293 2.3e-110 402.9 319 61.8
BraA09t40620Z Brassica rapa HOM05D005903 ORTHO05D007293 3.0e-110 402.5 330 60.6
Migut.G01043 Erythranthe guttata HOM05D005903 ORTHO05D007293 5.2e-110 401.7 322 62.1
Dinv26323 Davidia involucrata HOM05D005903 ORTHO05D007293 1.5e-109 400.2 301 64.5
Lsat_1_v5_gn_1_24420 Lactuca sativa HOM05D005903 ORTHO05D007293 1.5e-109 400.2 316 62.3
MD05G1245400 Malus domestica HOM05D005903 ORTHO05D007293 4.4e-109 398.7 321 61.4
A09p51850 Brassica napus HOM05D005903 ORTHO05D007293 5.7e-109 398.3 330 60.0
BcaB01g00896 Brassica carinata HOM05D005903 ORTHO05D007293 1.7e-108 396.7 321 61.4
Cc09_g05110 Coffea canephora HOM05D005903 ORTHO05D007293 3.7e-108 395.6 319 61.4
Glyma.08G089000 Glycine max HOM05D005903 ORTHO05D007293 8.3e-108 394.4 326 58.6
ECA247G0018 Erigeron canadensis HOM05D005903 ORTHO05D007293 3.2e-107 392.5 319 61.1
Hund09980 Selenicereus undatus HOM05D005903 ORTHO05D007293 2.7e-106 389.4 372 53.0
DCAR_003756 Daucus carota HOM05D005903 ORTHO05D007293 1.3e-105 387.1 362 53.6
VMungo0251G1440 Vigna mungo HOM05D005903 ORTHO05D007293 1.7e-105 386.7 328 57.9
Cc00_g27340 Coffea canephora HOM05D005903 ORTHO05D007293 8.6e-105 384.4 319 60.8
Rhsim05G0003000 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.1e-102 377.5 375 53.3
Ciclev10016117m.g Citrus clementina HOM05D005903 ORTHO05D007293 2.3e-102 376.3 292 62.7
CSS0034787 Camellia sinensis var. sinensis HOM05D005903 ORTHO05D007293 4.0e-102 375.6 300 62.0
Duzib052G0373 Durio zibethinus HOM05D005903 ORTHO05D007293 5.2e-102 375.2 341 58.1
Dinv01020 Davidia involucrata HOM05D005903 ORTHO05D007293 3.4e-101 372.5 328 57.6
Hma1.2p1_1011F.1_g247520 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 4.9e-100 368.6 335 58.8
ATR0605G282 Amborella trichopoda HOM05D005903 ORTHO05D007293 1.4e-99 367.1 328 57.3
Hma1.2p1_0088F.1_g045273 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 1.9e-99 366.7 335 58.8
Rhsim13G0219000 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.6e-98 363.6 321 56.7
Sabra01G0053000 Salix brachista HOM05D005903 ORTHO05D007293 1.3e-97 360.5 322 58.1
PSO675G2002 Papaver somniferum HOM05D005903 ORTHO05D007293 6.6e-97 358.2 328 54.9
TWI63G1157 Tripterygium wilfordii HOM05D005903 ORTHO05D007293 6.6e-97 358.2 327 56.6
arahy.Tifrunner.gnm1.ann1.7A7AL1 Arachis hypogaea HOM05D005903 ORTHO05D007293 3.3e-96 355.9 317 57.1
SGA_v2.0_scaffold31G12765 Striga asiatica HOM05D005903 ORTHO05D007293 8.9e-94 347.8 326 55.8
Psat7g087640 Pisum sativum HOM05D005903 ORTHO05D007293 1.2e-93 347.4 264 63.3
AUR62032162 Chenopodium quinoa HOM05D005903 ORTHO05D007293 4.9e-92 342.0 275 60.4
Lj1C1150G3 Lonicera japonica HOM05D005903 ORTHO05D007293 2.7e-90 336.3 292 59.2
SEGI_28167 Sequoiadendron giganteum HOM05D005903 ORTHO05D007293 1.3e-89 334.0 326 52.8
HPP92_021274 Vanilla planifolia HOM05D005903 ORTHO05D007293 1.7e-89 333.6 321 54.8
Haze_05254 Corylus avellana HOM05D005903 ORTHO05D007293 1.1e-88 330.9 328 54.9
Rhsim07G0106900 Rhododendron simsii HOM05D005903 ORTHO05D007293 4.7e-87 325.5 320 53.8
Sopen02g026460 Solanum pennellii HOM05D005903 ORTHO05D007293 6.2e-87 325.1 255 63.5
CDE06G1059 Ceratophyllum demersum HOM05D005903 ORTHO05D007293 3.4e-85 319.3 336 52.7
Peaxi162Scf00036g02217 Petunia axillaris HOM05D005903 ORTHO05D007293 5.8e-85 318.5 293 55.3
Prupe.7G025500 Prunus persica HOM05D005903 ORTHO05D007293 2.4e-83 313.2 217 67.7
Phvul.002G188100 Phaseolus vulgaris HOM05D005903 ORTHO05D007293 3.9e-81 305.8 263 57.0
COL.COLO4_05791 Corchorus olitorius HOM05D005903 ORTHO05D007293 3.1e-78 296.2 181 74.0
Prupe.4G118500 Prunus persica HOM05D005903 ORTHO05D007293 5.8e-77 292.0 244 59.4
arahy.Tifrunner.gnm1.ann1.STP4KF Arachis hypogaea HOM05D005903 ORTHO05D007293 1.7e-73 280.4 300 50.7
AagrBONN_evm.TU.Sc2ySwM_344.2832 Anthoceros agrestis HOM05D005903 ORTHO05D007293 2.5e-72 276.6 328 46.0
Os11g0549650 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 1.6e-71 273.9 206 63.1
SMO367G0859 Selaginella moellendorffii HOM05D005903 ORTHO05D007293 2.4e-70 270.0 336 44.9
Zm00001eb201720 Zea mays HOM05D005903 ORTHO05D007293 1.2e-69 267.7 206 62.6
Lalb_Chr07g0188231 Lupinus albus HOM05D005903 ORTHO05D007293 4.5e-69 265.8 194 65.5
Pp3c7_4190 Physcomitrium patens HOM05D005903 ORTHO05D007293 2.9e-68 263.1 328 43.9
Mapoly0019s0171 Marchantia polymorpha HOM05D005903 ORTHO05D007293 3.8e-68 262.7 327 44.0
Oeu056062.1 Olea europaea HOM05D005903 ORTHO05D007293 3.3e-56 223.0 153 66.7
Gohir.D11G050975 Gossypium hirsutum HOM05D005903 ORTHO05D007293 3.8e-52 209.5 169 61.5
unitig_46.g18341 Utricularia gibba HOM05D005903 ORTHO05D007293 3.2e-51 206.5 326 40.5
Os11g0549690 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 7.4e-48 195.3 150 61.3
Sc04g0004130 Simmondsia chinensis HOM05D005903 ORTHO05D007293 8.2e-47 191.8 165 58.8
Sc04g0004120 Simmondsia chinensis HOM05D005903 ORTHO05D007293 1.6e-42 177.6 120 63.3
MCO11G061 Micromonas commoda HOM05D005903 ORTHO05D007293 1.1e-40 171.4 347 33.4
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 7.4e-40 168.7 182 45.6
Cre10.g436900 Chlamydomonas reinhardtii HOM05D005903 ORTHO05D007293 3.1e-38 163.3 306 35.3
Cfa024540 Carpinus fangiana HOM05D005903 ORTHO05D007293 4.5e-37 159.5 226 41.2
Haze_05249 Corylus avellana HOM05D005903 ORTHO05D007293 1.1e-32 144.8 198 46.5
Lalb_Chr07g0188221 Lupinus albus HOM05D005903 ORTHO05D007293 7.4e-32 142.1 153 48.4
PRCOL_00001260 Prasinoderma coloniale HOM05D005903 ORTHO05D007293 9.1e-30 135.2 349 30.9
Migut.O00470 Erythranthe guttata HOM05D005903 ORTHO05D007293 3.4e-29 133.3 144 51.4
CARHR106840 Cardamine hirsuta HOM05D005903 ORTHO05D007293 1.6e-21 107.8 119 47.9
CAN.G508.15 Capsicum annuum HOM05D005903 ORTHO05D007293 8.2e-15 85.5 243 26.3
Os05g0295700 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 5.3e-14 82.8 57 59.6
COL.COLO4_05792 Corchorus olitorius HOM05D005903 ORTHO05D007293 9.1e-14 82.0 75 58.7
Glyma.08G193350 Glycine max HOM05D005903 ORTHO05D007293 2.7e-13 80.5 60 65.0
Oeu056063.2 Olea europaea HOM05D007234 ORTHO05D008488 3.0e-09 67.0 64 54.7
SHI32710 Sapria himalayana HOM05D005903 ORTHO05D007293 5.2e-09 66.2 89 47.2
SHI32711 Sapria himalayana HOM05D005903 ORTHO05D007293 8.8e-09 65.5 56 53.6
CBR_g8146 Chara braunii HOM05D005903 ORTHO05D000048 1.3e-07 61.6 66 45.5


User provided reference genes

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