Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00835 Aquilegia oxysepala HOM05D007841 ORTHO05D009919 5.1e-30 134.0 83 100.0
Sed0011386 Sechium edule HOM05D007841 ORTHO05D009919 1.0e-25 119.8 65 92.3
Atru.chr5.91 Acer truncatum HOM05D007841 ORTHO05D009919 1.9e-24 115.5 65 89.2
Gohir.D12G101400 Gossypium hirsutum HOM05D007841 ORTHO05D009919 1.9e-24 115.5 65 89.2
Gorai.008G110500 Gossypium raimondii HOM05D007841 ORTHO05D009919 1.9e-24 115.5 65 89.2
Prupe.2G120100 Prunus persica HOM05D007841 ORTHO05D009919 1.9e-24 115.5 65 87.7
Duzib138G1421 Durio zibethinus HOM05D007841 ORTHO05D009919 2.5e-24 115.2 65 89.2
Hma1.2p1_2138F.1_g314930 Hydrangea macrophylla HOM05D007841 ORTHO05D009919 2.5e-24 115.2 65 87.7
EL10Ac1g00736 Beta vulgaris HOM05D007841 ORTHO05D009919 3.2e-24 114.8 65 87.7
CANSAT25G3347 Cannabis sativa HOM05D007841 ORTHO05D009919 3.2e-24 114.8 65 87.7
CANSAT25G3825 Cannabis sativa HOM05D007841 ORTHO05D009919 3.2e-24 114.8 65 87.7
Phvul.008G138900 Phaseolus vulgaris HOM05D007841 ORTHO05D009919 4.2e-24 114.4 65 87.7
Lj1g0014858 Lotus japonicus HOM05D007841 ORTHO05D009919 7.2e-24 113.6 63 90.5
PGR004G1954 Punica granatum HOM05D007841 ORTHO05D009919 7.2e-24 113.6 65 86.2
HanXRQChr01g0019691 Helianthus annuus HOM05D007841 ORTHO05D009919 9.4e-24 113.2 65 86.2
Lalb_Chr03g0040951 Lupinus albus HOM05D007841 ORTHO05D009919 1.2e-23 112.8 65 86.2
Oeu034848.1 Olea europaea HOM05D007841 ORTHO05D009919 1.2e-23 112.8 65 86.2
Gohir.A12G098200 Gossypium hirsutum HOM05D007841 ORTHO05D009919 1.6e-23 112.5 65 86.2
Psat3g152880 Pisum sativum HOM05D007841 ORTHO05D009919 2.7e-23 111.7 65 86.2
CAN.G756.38 Capsicum annuum HOM05D007841 ORTHO05D009919 3.6e-23 111.3 64 85.9
Glyma.08G340600 Glycine max HOM05D007841 ORTHO05D009919 3.6e-23 111.3 63 88.9
Medtr7g050540 Medicago truncatula HOM05D007841 ORTHO05D009919 3.6e-23 111.3 65 86.2
RcHm_v2.0_Chr1g0345181 Rosa chinensis HOM05D007841 ORTHO05D009919 3.6e-23 111.3 65 84.6
Actinidia30942 Actinidia chinensis HOM05D007841 ORTHO05D009919 6.1e-23 110.5 65 83.1
ECA248G0141 Erigeron canadensis HOM05D007841 ORTHO05D009919 8.0e-23 110.2 65 84.6
Lsat_1_v5_gn_1_83981 Lactuca sativa HOM05D007841 ORTHO05D009919 1.0e-22 109.8 65 84.6
MD02G1221100 Malus domestica HOM05D007841 ORTHO05D009919 1.0e-22 109.8 65 83.1
Solyc01g088770.3 Solanum lycopersicum HOM05D007841 ORTHO05D009919 1.0e-22 109.8 65 81.5
Sopen01g035610 Solanum pennellii HOM05D007841 ORTHO05D009919 1.0e-22 109.8 65 81.5
PGSC0003DMG400001726 Solanum tuberosum HOM05D007841 ORTHO05D009919 1.0e-22 109.8 65 81.5
THA.LOC104814059 Tarenaya hassleriana HOM05D007841 ORTHO05D009919 1.0e-22 109.8 64 87.5
Cc02_g25410 Coffea canephora HOM05D007841 ORTHO05D009919 1.4e-22 109.4 65 81.5
COL.COLO4_12370 Corchorus olitorius HOM05D007841 ORTHO05D009919 1.4e-22 109.4 65 83.1
arahy.Tifrunner.gnm1.ann1.K94MSK Arachis hypogaea HOM05D007841 ORTHO05D009919 2.3e-22 108.6 64 84.4
PSO675G0834 Papaver somniferum HOM05D007841 ORTHO05D009919 2.3e-22 108.6 64 82.8
CiPaw.14G018000 Carya illinoinensis HOM05D007841 ORTHO05D009919 3.0e-22 108.2 65 81.5
PSO732G0215 Papaver somniferum HOM05D007841 ORTHO05D009919 3.0e-22 108.2 64 82.8
Migut.N01723 Erythranthe guttata HOM05D007841 ORTHO05D009919 4.0e-22 107.8 64 84.4
BcaB03g13636 Brassica carinata HOM05D000300 ORTHO05D000383 6.7e-22 107.1 64 84.4
ClCG05G003010 Citrullus lanatus HOM05D007841 ORTHO05D009919 6.7e-22 107.1 65 81.5
Potri.014G051850 Populus trichocarpa HOM05D007841 ORTHO05D009919 6.7e-22 107.1 65 81.5
AL1G10060 Arabidopsis lyrata HOM05D007841 ORTHO05D009919 8.8e-22 106.7 64 84.4
AT1G02160 Arabidopsis thaliana HOM05D007841 ORTHO05D009919 8.8e-22 106.7 64 84.4
Carub.0001s0004 Capsella rubella HOM05D007841 ORTHO05D009919 8.8e-22 106.7 64 84.4
CARHR000160 Cardamine hirsuta HOM05D007841 ORTHO05D009919 8.8e-22 106.7 64 84.4
Thhalv10009237m.g Eutrema salsugineum HOM05D007841 ORTHO05D009919 8.8e-22 106.7 64 84.4
CsaV3_3G010620 Cucumis sativus L. HOM05D007841 ORTHO05D009919 1.1e-21 106.3 65 81.5
MD07G1096500 Malus domestica HOM05D007841 ORTHO05D009919 1.5e-21 105.9 65 83.1
C05p00040 Brassica napus HOM05D007841 ORTHO05D009919 2.6e-21 105.1 64 82.8
BolC5t28791H Brassica oleracea HOM05D007841 ORTHO05D009919 2.6e-21 105.1 64 82.8
Thecc.01G400700 Theobroma cacao HOM05D007841 ORTHO05D009919 3.3e-21 104.8 66 83.3
FvH4_7g09140 Fragaria vesca HOM05D007841 ORTHO05D009919 4.4e-21 104.4 65 81.5
Eucgr.D01199 Eucalyptus grandis HOM05D007841 ORTHO05D009919 5.7e-21 104.0 65 80.0
Manes.05G057100 Manihot esculenta HOM05D007841 ORTHO05D009919 5.7e-21 104.0 57 87.7
Zm00001eb067220 Zea mays HOM05D007841 ORTHO05D009919 2.2e-20 102.1 65 81.5
Os04g0665000 Oryza sativa ssp. japonica HOM05D007841 ORTHO05D009919 1.4e-19 99.4 65 80.0
GSVIVG01018320001 Vitis vinifera HOM05D007841 ORTHO05D009919 3.1e-19 98.2 65 76.9
FAN06G3108 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.2e-18 96.3 60 80.0
unitig_22.g6702 Utricularia gibba HOM05D007841 ORTHO05D009919 2.7e-18 95.1 64 73.4
Haze_02887 Corylus avellana HOM05D000061 ORTHO05D000915 1.3e-17 92.8 53 79.2
Hund17114 Selenicereus undatus HOM05D007841 ORTHO05D009919 2.2e-17 92.0 49 87.8
Nitab4.5_0004425g0050 Nicotiana tabacum HOM05D007841 ORTHO05D009919 3.8e-17 91.3 56 78.6
Nn6g33742 Nelumbo nucifera HOM05D007841 ORTHO05D009919 6.5e-17 90.5 49 81.6
CSS0006405 Camellia sinensis var. sinensis HOM05D007841 ORTHO05D009919 1.9e-16 89.0 49 83.7
SalBow4G0679 Salvia bowleyana HOM05D007841 ORTHO05D009919 1.9e-16 89.0 49 83.7
Peaxi162Scf00793g00363 Petunia axillaris HOM05D007841 ORTHO05D009919 3.2e-16 88.2 49 83.7
arahy.Tifrunner.gnm1.ann1.X5EUJ4 Arachis hypogaea HOM05D007841 ORTHO05D009919 5.5e-16 87.4 49 85.7
Ciclev10023064m.g Citrus clementina HOM05D007841 ORTHO05D009919 7.2e-16 87.0 49 83.7
PSO732G0130 Papaver somniferum HOM05D007841 ORTHO05D009919 2.1e-15 85.5 48 81.2
Sc02g0003210 Simmondsia chinensis HOM05D007841 ORTHO05D009919 2.1e-15 85.5 49 81.6
BraA10t42285Z Brassica rapa HOM05D007841 ORTHO05D009919 4.7e-15 84.3 48 83.3
FAN01G1055 Fragaria x ananassa HOM05D007841 ORTHO05D009919 4.7e-15 84.3 49 83.7
FAN03G2201 Fragaria x ananassa HOM05D007841 ORTHO05D009919 4.7e-15 84.3 49 83.7
AUR62013771 Chenopodium quinoa HOM05D007841 ORTHO05D009919 6.1e-15 84.0 49 81.6
AUR62023385 Chenopodium quinoa HOM05D007841 ORTHO05D009919 6.1e-15 84.0 49 81.6
Sp1g00090 Schrenkiella parvula HOM05D007841 ORTHO05D009919 6.1e-15 84.0 48 83.3
Pp3c22_2080 Physcomitrium patens HOM05D007841 ORTHO05D009919 2.6e-13 78.6 63 61.9
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 1.4e-11 72.8 45 82.2
Mapoly0181s0011 Marchantia polymorpha HOM05D007841 ORTHO05D009919 7.0e-11 70.5 59 57.6
Sabra14G0036700 Salix brachista HOM05D007841 ORTHO05D009919 7.0e-11 70.5 41 87.8
AagrBONN_evm.TU.Sc2ySwM_228.3132 Anthoceros agrestis HOM05D007841 ORTHO05D009919 9.1e-11 70.1 51 66.7
Aa31LG1G11570 Aethionema arabicum HOM05D007841 ORTHO05D009919 1.6e-10 69.3 48 75.0
Actinidia05779 Actinidia chinensis HOM05D007841 ORTHO05D009919 2.5e-08 62.0 33 84.8
CAN.G756.35 Capsicum annuum HOM05D007841 ORTHO05D009919 3.6e-07 58.2 33 87.9


User provided reference genes

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