Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00781 Aquilegia oxysepala HOM05D007506 ORTHO05D008409 5.6e-30 134.0 90 100.0
Aqoxy7G00782 Aquilegia oxysepala HOM05D007506 ORTHO05D008409 4.0e-12 74.7 63 71.4
CiPaw.14G033800 Carya illinoinensis HOM05D007506 ORTHO05D008409 3.4e-11 71.6 63 65.1
RcHm_v2.0_Chr1g0331731 Rosa chinensis HOM05D007506 ORTHO05D008409 7.6e-11 70.5 69 62.3
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 1.3e-10 69.7 63 65.1
PSO339G4482 Papaver somniferum HOM05D007506 ORTHO05D008409 2.2e-10 68.9 63 60.3
PSO801G0534 Papaver somniferum HOM05D007506 ORTHO05D008409 2.2e-10 68.9 63 60.3
Dinv12843 Davidia involucrata HOM05D007506 ORTHO05D008409 3.8e-10 68.2 66 65.2
Haze_03301 Corylus avellana HOM05D007506 ORTHO05D008409 8.4e-10 67.0 64 64.1
TAR633G2594 Trochodendron aralioides HOM05D007506 ORTHO05D008409 1.4e-09 66.2 63 58.7
FvH4_7g05151 Fragaria vesca HOM05D007506 ORTHO05D008409 3.2e-09 65.1 40 80.0
FAN05G5073 Fragaria x ananassa HOM05D007506 ORTHO05D008409 3.2e-09 65.1 40 80.0
FAN08G2571 Fragaria x ananassa HOM05D007506 ORTHO05D008409 3.2e-09 65.1 40 80.0
FAN28G2052 Fragaria x ananassa HOM05D007506 ORTHO05D008409 3.2e-09 65.1 40 80.0
Potri.008G016801 Populus trichocarpa HOM05D007506 ORTHO05D008409 5.4e-09 64.3 63 61.9
Migut.F00865 Erythranthe guttata HOM05D007506 ORTHO05D008409 7.1e-09 63.9 66 62.1
CDE12G0642 Ceratophyllum demersum HOM05D007506 ORTHO05D008409 1.6e-08 62.8 51 58.8
Peaxi162Scf00519g00621 Petunia axillaris HOM05D007506 ORTHO05D008409 1.6e-08 62.8 57 64.9
GSVIVG01010679001 Vitis vinifera HOM05D007506 ORTHO05D008409 1.6e-08 62.8 46 69.6
Manes.07G086800 Manihot esculenta HOM05D007506 ORTHO05D008409 2.1e-08 62.4 61 62.3
PGR142G2547 Punica granatum HOM05D007506 ORTHO05D008409 2.7e-08 62.0 63 63.5
Manes.10G062500 Manihot esculenta HOM05D007506 ORTHO05D008409 3.5e-08 61.6 63 57.1
FAN01G2227 Fragaria x ananassa HOM05D002241 ORTHO05D002458 7.8e-08 60.5 72 55.6
SEGI_39886 Sequoiadendron giganteum HOM05D007506 ORTHO05D008409 7.8e-08 60.5 54 59.3
MBI17_g08330_MAGBIO Magnolia biondii HOM05D007506 ORTHO05D008409 1.0e-07 60.1 62 62.9
Hund06790 Selenicereus undatus HOM05D007506 ORTHO05D008409 1.0e-07 60.1 68 58.8
Cpa.g.sc54.9 Carica papaya HOM05D007506 ORTHO05D008409 1.3e-07 59.7 55 63.6
Duzib106G0675 Durio zibethinus HOM05D007506 ORTHO05D008409 1.3e-07 59.7 65 58.5
Lalb_Chr01g0004881 Lupinus albus HOM05D004934 ORTHO05D005924 1.3e-07 59.7 41 70.7
Nitab4.5_0002586g0040 Nicotiana tabacum HOM05D007506 ORTHO05D008409 1.3e-07 59.7 66 57.6
PSO384G4162 Papaver somniferum HOM05D004934 ORTHO05D005924 1.7e-07 59.3 48 60.4
Sabra08G0010500 Salix brachista HOM05D007506 ORTHO05D008409 1.7e-07 59.3 63 57.1
Lsat_1_v5_gn_6_38900 Lactuca sativa HOM05D004934 ORTHO05D005924 2.3e-07 58.9 39 82.1
CSS0050385 Camellia sinensis var. sinensis HOM05D007506 ORTHO05D008409 3.0e-07 58.5 57 63.2
FAN03G1835 Fragaria x ananassa HOM05D007506 ORTHO05D008409 3.0e-07 58.5 65 60.0
SalBow3G3829 Salvia bowleyana HOM05D007506 ORTHO05D008409 3.0e-07 58.5 41 68.3
PSO339G2388 Papaver somniferum HOM05D004934 ORTHO05D005924 3.9e-07 58.2 48 60.4
Lalb_Chr06g0166331 Lupinus albus HOM05D007506 ORTHO05D008409 5.1e-07 57.8 38 76.3
THA.LOC104800543 Tarenaya hassleriana HOM05D004934 ORTHO05D005924 5.1e-07 57.8 39 79.5
Ciclev10017346m.g Citrus clementina HOM05D007506 ORTHO05D008409 6.6e-07 57.4 59 61.0
Glyma.10G277900 Glycine max HOM05D007506 ORTHO05D008409 6.6e-07 57.4 90 51.1
Gohir.A09G096200 Gossypium hirsutum HOM05D004934 ORTHO05D005924 6.6e-07 57.4 39 71.8
Gohir.D09G095900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 6.6e-07 57.4 39 71.8
Sabra10G0188200 Salix brachista HOM05D007506 ORTHO05D008409 6.6e-07 57.4 82 48.8
THA.LOC109117254 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 6.6e-07 57.4 59 57.6
CANSAT56G4328 Cannabis sativa HOM05D007506 ORTHO05D008409 1.1e-06 56.6 57 59.6
Lalb_Chr02g0146201 Lupinus albus HOM05D007506 ORTHO05D008409 1.1e-06 56.6 39 71.8
Lalb_Chr03g0028151 Lupinus albus HOM05D004934 ORTHO05D005924 1.1e-06 56.6 41 68.3
Medtr1g111840 Medicago truncatula HOM05D007506 ORTHO05D008409 1.1e-06 56.6 64 57.8
HanXRQChr13g0397481 Helianthus annuus HOM05D004934 ORTHO05D005924 1.5e-06 56.2 39 79.5
Nitab4.5_0010633g0010 Nicotiana tabacum HOM05D007506 ORTHO05D008409 1.5e-06 56.2 63 57.1
unitig_27.g25034 Utricularia gibba HOM05D004934 ORTHO05D005924 1.5e-06 56.2 39 79.5
vmacro10310 Vaccinium macrocarpon HOM05D007506 ORTHO05D008409 1.5e-06 56.2 55 65.5
Atru.chr12.1049 Acer truncatum HOM05D007506 ORTHO05D008409 1.9e-06 55.8 60 56.7
Ca_19413_v3 Cicer arietinum L. HOM05D004934 ORTHO05D005924 1.9e-06 55.8 38 73.7
Hma1.2p1_0756F.1_g213210 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 1.9e-06 55.8 60 61.7
Hma1.2p1_0756F.1_g213215 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 1.9e-06 55.8 60 61.7
Hma1.2p1_1491F.1_g286710 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 1.9e-06 55.8 60 61.7
THA.LOC104816468 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 1.9e-06 55.8 71 50.7
Thecc.10G114000 Theobroma cacao HOM05D007506 ORTHO05D008409 1.9e-06 55.8 63 58.7
AUR62009749 Chenopodium quinoa HOM05D004934 ORTHO05D005924 2.5e-06 55.5 39 76.9
AUR62036196 Chenopodium quinoa HOM05D004934 ORTHO05D005924 2.5e-06 55.5 39 76.9
Ca_25653_v3 Cicer arietinum L. HOM05D007506 ORTHO05D008409 2.5e-06 55.5 61 57.4
Cc02_g09560 Coffea canephora HOM05D007506 ORTHO05D008409 2.5e-06 55.5 65 58.5
ECA233G4139 Erigeron canadensis HOM05D004934 ORTHO05D005924 2.5e-06 55.5 38 78.9
Nn6g34869 Nelumbo nucifera HOM05D007506 ORTHO05D008409 2.5e-06 55.5 56 60.7
Nitab4.5_0005214g0030 Nicotiana tabacum HOM05D007506 ORTHO05D008409 2.5e-06 55.5 63 57.1
PSO339G6001 Papaver somniferum HOM05D004934 ORTHO05D005924 2.5e-06 55.5 39 76.9
Potri.009G163100 Populus trichocarpa HOM05D004934 ORTHO05D005924 2.5e-06 55.5 38 78.9
Sabra09G0127300 Salix brachista HOM05D004934 ORTHO05D005924 2.5e-06 55.5 38 78.9
EL10Ac7g15830 Beta vulgaris HOM05D004934 ORTHO05D005924 3.3e-06 55.1 39 76.9
Dinv42546 Davidia involucrata HOM05D004934 ORTHO05D005924 3.3e-06 55.1 39 76.9
Glyma.20G110900 Glycine max HOM05D007506 ORTHO05D008409 3.3e-06 55.1 88 44.3
PSO801G0293 Papaver somniferum HOM05D004934 ORTHO05D005924 3.3e-06 55.1 39 74.4
TPR.G17236 Trifolium pratense HOM05D004934 ORTHO05D005924 3.3e-06 55.1 38 71.1
CiPaw.14G099500 Carya illinoinensis HOM05D004934 ORTHO05D005924 4.3e-06 54.7 39 74.4
Dinv02210 Davidia involucrata HOM05D007506 ORTHO05D008409 4.3e-06 54.7 57 59.6
Medtr4g052910 Medicago truncatula HOM05D004934 ORTHO05D005924 4.3e-06 54.7 38 71.1
Hund18761 Selenicereus undatus HOM05D004934 ORTHO05D005924 4.3e-06 54.7 39 74.4
Zm00001eb242800 Zea mays HOM05D007506 ORTHO05D008409 4.3e-06 54.7 49 63.3
CANSAT54G1198 Cannabis sativa HOM05D004934 ORTHO05D005924 5.6e-06 54.3 49 63.3
Gohir.D08G015900 Gossypium hirsutum HOM05D004934 ORTHO05D005924 5.6e-06 54.3 39 76.9
Gorai.004G010200 Gossypium raimondii HOM05D004934 ORTHO05D005924 5.6e-06 54.3 39 76.9
MD03G1147400 Malus domestica HOM05D004934 ORTHO05D005924 5.6e-06 54.3 41 70.7
Psat7g187720 Pisum sativum HOM05D004934 ORTHO05D005924 5.6e-06 54.3 38 71.1
Sc20g0001140 Simmondsia chinensis HOM05D007506 ORTHO05D008409 5.6e-06 54.3 66 56.1
Thecc.09G281300 Theobroma cacao HOM05D004934 ORTHO05D005924 5.6e-06 54.3 39 74.4
vmacro14353 Vaccinium macrocarpon HOM05D004934 ORTHO05D005924 5.6e-06 54.3 41 70.7
EL10Ac4g08692 Beta vulgaris HOM05D007506 ORTHO05D008409 7.3e-06 53.9 69 53.6
Migut.N02487 Erythranthe guttata HOM05D004934 ORTHO05D005924 7.3e-06 53.9 62 53.2
Phvul.011G095100 Phaseolus vulgaris HOM05D004934 ORTHO05D005924 7.3e-06 53.9 38 71.1
Sed0023104 Sechium edule HOM05D007506 ORTHO05D008409 7.3e-06 53.9 57 59.6
arahy.Tifrunner.gnm1.ann1.Q13MWU Arachis hypogaea HOM05D004934 ORTHO05D005924 9.6e-06 53.5 38 68.4
arahy.Tifrunner.gnm1.ann1.Q2H7V9 Arachis hypogaea HOM05D004934 ORTHO05D005924 9.6e-06 53.5 38 68.4
MSTRG.17705 Avicennia marina HOM05D004934 ORTHO05D005924 9.6e-06 53.5 44 65.9
Glyma.11G182300 Glycine max HOM05D004934 ORTHO05D005924 9.6e-06 53.5 38 68.4
Glyma.12G090500 Glycine max HOM05D004934 ORTHO05D005924 9.6e-06 53.5 38 68.4
GSVIVG01036114001 Vitis vinifera HOM05D004934 ORTHO05D005924 9.6e-06 53.5 44 65.9


User provided reference genes

Program Settings