Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 6.9e-125 450.7 230 100.0
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 8.0e-81 304.3 193 76.7
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 4.0e-80 302.0 234 68.4
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 1.2e-79 300.4 215 71.2
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 2.6e-79 299.3 195 74.4
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 3.3e-79 298.9 203 72.9
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 3.3e-79 298.9 192 75.5
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 1.3e-78 297.0 191 74.9
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.3e-78 297.0 220 67.7
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 3.7e-78 295.4 202 72.3
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 4.8e-78 295.0 206 72.8
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 1.8e-77 293.1 191 74.9
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 5.3e-77 291.6 191 74.9
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 9.1e-77 290.8 227 67.4
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 1.6e-76 290.0 189 74.1
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.6e-76 290.0 189 74.1
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 2.7e-76 289.3 189 74.1
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.5e-76 288.9 189 74.1
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 5.9e-76 288.1 189 73.0
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 1.0e-75 287.3 189 73.5
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 1.0e-75 287.3 199 66.8
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.3e-75 287.0 183 74.9
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 2.2e-75 286.2 191 71.2
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 2.9e-75 285.8 194 71.1
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 2.9e-75 285.8 182 76.4
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 6.5e-75 284.6 198 70.2
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 8.5e-75 284.3 214 67.3
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 1.9e-74 283.1 227 63.4
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 2.5e-74 282.7 230 62.6
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.2e-73 280.4 190 72.1
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 2.7e-73 279.3 235 62.6
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 2.7e-73 279.3 188 73.4
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 6.1e-73 278.1 191 70.7
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 8.0e-73 277.7 191 72.8
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 1.0e-72 277.3 211 66.4
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 2.3e-72 276.2 194 70.6
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 5.2e-72 275.0 222 63.1
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 6.8e-72 274.6 184 73.4
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 1.2e-71 273.9 178 77.0
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 2.0e-71 273.1 188 68.1
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 7.5e-71 271.2 184 72.3
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 2.2e-70 269.6 184 71.7
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 2.2e-70 269.6 199 65.3
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 2.2e-70 269.6 200 68.0
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 2.8e-70 269.2 221 63.8
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 2.8e-70 269.2 203 67.0
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 2.8e-70 269.2 202 70.3
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 3.7e-70 268.9 195 67.2
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 6.3e-70 268.1 181 74.0
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 8.3e-70 267.7 193 67.4
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 1.4e-69 266.9 175 74.9
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.4e-69 266.9 193 66.8
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 1.8e-69 266.5 209 66.0
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 2.4e-69 266.2 205 66.3
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 2.4e-69 266.2 192 67.2
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 4.1e-69 265.4 201 65.7
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 4.1e-69 265.4 220 61.4
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 5.4e-69 265.0 202 66.3
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 9.1e-69 264.2 266 57.1
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 1.2e-68 263.8 202 67.3
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 1.6e-68 263.5 208 63.5
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 2.0e-68 263.1 192 67.7
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 2.7e-68 262.7 201 66.2
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 3.5e-68 262.3 176 73.3
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 4.5e-68 261.9 186 69.9
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 5.9e-68 261.5 201 66.7
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 5.9e-68 261.5 200 66.0
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 5.9e-68 261.5 221 63.3
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 1.0e-67 260.8 185 71.4
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 1.3e-67 260.4 201 66.2
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 1.3e-67 260.4 182 70.3
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 5.0e-67 258.5 201 66.2
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 5.0e-67 258.5 202 64.9
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 5.0e-67 258.5 181 71.3
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 3.3e-66 255.8 182 66.5
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 4.2e-66 255.4 201 65.7
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 5.5e-66 255.0 240 61.2
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 1.4e-64 250.4 195 67.7
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 1.8e-64 250.0 184 68.5
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 5.2e-64 248.4 234 57.7
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 3.5e-60 235.7 177 67.8
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 2.9e-59 232.6 191 64.9
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 3.9e-59 232.3 177 66.7
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 5.6e-58 228.4 319 44.5
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 4.7e-57 225.3 200 57.5
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 1.4e-56 223.8 198 60.6
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.2e-52 210.7 230 54.3
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 1.6e-52 210.3 198 60.1
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 2.0e-52 209.9 184 62.0
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 2.0e-52 209.9 145 71.0
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 4.6e-52 208.8 185 60.0
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 8.6e-51 204.5 145 66.9
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 5.6e-50 201.8 134 78.4
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 7.3e-50 201.4 139 74.1
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 2.0e-47 193.4 147 69.4
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 2.6e-47 193.0 141 67.4
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 4.9e-46 188.7 123 74.0
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 6.4e-46 188.3 119 76.5
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 5.4e-45 185.3 127 74.0
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 6.6e-43 178.3 145 64.8
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 4.4e-39 165.6 107 78.5
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 5.8e-39 165.2 155 53.5
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 1.9e-37 160.2 109 76.1
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 7.1e-37 158.3 175 48.0
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 7.1e-37 158.3 128 64.8
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.5e-36 156.0 107 76.6
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 3.3e-34 149.4 177 45.2
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 7.3e-34 148.3 106 68.9
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 5.8e-31 138.7 98 72.4
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 3.6e-25 119.4 147 46.9
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 3.1e-24 116.3 87 60.9
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.4e-21 107.5 152 42.1
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 5.1e-19 99.0 197 36.0
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 6.9e-16 88.6 56 67.9
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 6.4e-14 82.0 63 58.7
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 1.1e-13 81.3 71 57.7
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 5.6e-10 68.9 54 57.4
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 9.6e-10 68.2 42 66.7
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 3.1e-08 63.2 48 58.3
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 6.9e-08 62.0 83 44.6
SEGI_24864 Sequoiadendron giganteum HOM05D006638 ORTHO05D008246 2.0e-07 60.5 47 59.6


User provided reference genes

Program Settings