Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 4.8e-86 321.2 174 100.0
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 7.7e-60 234.2 175 68.6
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 1.8e-56 223.0 174 65.5
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 2.3e-56 222.6 174 65.5
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 8.8e-56 220.7 175 65.7
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 1.7e-54 216.5 167 66.5
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 1.8e-53 213.0 175 65.1
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 9.1e-53 210.7 175 64.0
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 3.4e-52 208.8 175 62.3
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 1.7e-51 206.5 174 60.9
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 7.2e-50 201.1 173 59.5
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 4.7e-49 198.4 175 61.7
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 5.2e-48 194.9 175 57.7
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 5.2e-48 194.9 175 58.3
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 9.7e-47 190.7 173 59.0
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.2e-46 189.5 176 58.5
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 3.7e-46 188.7 173 58.4
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 8.2e-46 187.6 176 62.5
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 8.2e-46 187.6 176 56.2
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 8.2e-46 187.6 173 56.6
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 1.4e-45 186.8 173 61.3
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 1.4e-45 186.8 172 58.7
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 2.4e-45 186.0 175 56.6
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 3.1e-45 185.7 175 58.3
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 3.1e-45 185.7 176 55.7
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 3.1e-45 185.7 176 63.1
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 4.1e-45 185.3 176 56.8
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 4.1e-45 185.3 173 57.2
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 5.3e-45 184.9 173 54.3
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 1.6e-44 183.3 176 56.2
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 2.6e-44 182.6 176 58.5
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 2.6e-44 182.6 178 58.4
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 3.5e-44 182.2 175 56.6
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 4.5e-44 181.8 173 57.2
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 1.0e-43 180.6 178 57.9
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 1.7e-43 179.9 173 54.9
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.2e-43 179.5 176 56.2
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 6.5e-43 177.9 176 61.4
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 6.5e-43 177.9 176 56.2
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 6.5e-43 177.9 176 56.2
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 1.1e-42 177.2 178 56.2
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 1.9e-42 176.4 175 58.3
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 2.5e-42 176.0 175 52.0
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 3.2e-42 175.6 177 53.7
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 3.2e-42 175.6 176 55.7
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 4.2e-42 175.3 174 58.0
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 4.2e-42 175.3 167 57.5
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 5.5e-42 174.9 175 53.7
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 7.2e-42 174.5 178 56.2
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 9.4e-42 174.1 173 53.8
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 9.4e-42 174.1 168 57.1
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 2.1e-41 172.9 175 56.0
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 2.1e-41 172.9 176 60.2
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 2.7e-41 172.6 175 53.7
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 3.6e-41 172.2 179 55.3
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 3.6e-41 172.2 176 59.7
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 6.1e-41 171.4 173 52.0
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 8.0e-41 171.0 175 57.1
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 1.8e-40 169.9 173 54.9
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 1.8e-40 169.9 173 54.9
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 3.0e-40 169.1 177 54.8
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 4.0e-40 168.7 175 50.9
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 8.8e-40 167.5 172 52.9
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 1.2e-39 167.2 176 52.8
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 1.5e-39 166.8 174 51.1
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 2.0e-39 166.4 174 53.4
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 2.6e-39 166.0 175 52.0
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 4.4e-39 165.2 175 59.4
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 1.7e-38 163.3 175 54.3
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 2.2e-38 162.9 175 52.0
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.8e-37 159.8 171 54.4
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 5.3e-37 158.3 170 58.2
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 9.1e-37 157.5 173 55.5
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 9.1e-37 157.5 169 50.3
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 1.2e-36 157.1 177 51.4
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 1.6e-36 156.8 184 48.9
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 2.0e-36 156.4 172 53.5
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 2.7e-36 156.0 175 50.3
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 3.5e-36 155.6 177 49.7
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 5.9e-36 154.8 174 50.0
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 7.7e-36 154.5 174 50.0
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 1.7e-35 153.3 173 50.3
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 1.7e-35 153.3 169 51.5
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 1.7e-35 153.3 172 52.3
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 2.2e-35 152.9 169 50.9
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 2.9e-35 152.5 171 52.6
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 3.8e-35 152.1 173 52.6
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 6.5e-35 151.4 110 68.2
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 6.5e-35 151.4 170 52.4
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 6.5e-35 151.4 172 51.7
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 1.1e-34 150.6 175 52.6
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 1.1e-34 150.6 175 52.6
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 1.5e-34 150.2 177 49.7
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 1.9e-34 149.8 175 53.1
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.6e-33 146.7 176 49.4
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 1.6e-33 146.7 176 49.4
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 1.6e-33 146.7 189 48.1
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 3.6e-33 145.6 180 47.2
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 3.6e-33 145.6 171 51.5
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 3.6e-33 145.6 178 49.4
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 4.7e-33 145.2 177 46.9
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 4.7e-33 145.2 174 49.4
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 6.1e-33 144.8 177 48.0
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 6.1e-33 144.8 174 53.4
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 8.0e-33 144.4 174 48.9
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 1.8e-32 143.3 177 46.3
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 1.8e-32 143.3 177 46.3
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 1.8e-32 143.3 177 46.3
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 1.8e-32 143.3 177 46.3
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 1.8e-32 143.3 173 53.8
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 3.0e-32 142.5 172 50.0
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 3.0e-32 142.5 110 60.9
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 6.8e-32 141.4 181 47.5
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 8.8e-32 141.0 177 45.8
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 1.5e-31 140.2 168 47.6
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 1.5e-31 140.2 179 46.4
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 2.0e-31 139.8 170 47.6
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 7.5e-31 137.9 177 47.5
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 1.7e-30 136.7 174 52.9
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 6.3e-30 134.8 176 45.5
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 3.1e-29 132.5 178 45.5
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 3.1e-29 132.5 179 45.8
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 3.1e-29 132.5 178 45.5
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 3.1e-29 132.5 178 45.5
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 3.1e-29 132.5 179 45.8
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 3.1e-29 132.5 178 47.8
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 8.0e-25 117.9 109 54.1
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 2.3e-24 116.3 178 40.4
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 5.6e-18 95.1 115 50.4
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 1.8e-16 90.1 182 34.1
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 2.6e-15 86.3 176 31.2
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 1.7e-14 83.6 185 29.2
CBR_g50926 Chara braunii HOM05D005835 ORTHO05D007187 2.3e-11 73.2 86 41.9


User provided reference genes

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