Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 1.1e-85 320.1 185 100.0
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 3.6e-39 165.6 199 50.3
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 2.0e-37 159.8 201 46.8
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 2.6e-37 159.5 127 62.2
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 1.7e-36 156.8 130 65.4
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 2.8e-36 156.0 136 55.9
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 8.2e-36 154.5 131 61.1
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 8.2e-36 154.5 177 50.8
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 4.1e-35 152.1 124 60.5
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 6.9e-35 151.4 133 59.4
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 6.9e-35 151.4 186 47.8
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 9.1e-35 151.0 130 59.2
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 2.0e-34 149.8 105 68.6
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 2.0e-34 149.8 99 70.7
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 2.6e-34 149.4 176 50.0
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 3.4e-34 149.1 99 70.7
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 3.4e-34 149.1 99 70.7
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 3.4e-34 149.1 162 47.5
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 4.5e-34 148.7 133 57.9
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 4.5e-34 148.7 170 55.3
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 4.5e-34 148.7 128 60.2
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 5.9e-34 148.3 99 70.7
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 1.0e-33 147.5 127 61.4
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 1.7e-33 146.7 127 63.0
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 3.8e-33 145.6 104 66.3
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 6.5e-33 144.8 127 61.4
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 8.5e-33 144.4 98 68.4
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 8.5e-33 144.4 125 63.2
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 8.5e-33 144.4 131 60.3
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 1.4e-32 143.7 102 68.6
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 1.9e-32 143.3 136 57.4
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 3.2e-32 142.5 127 58.3
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 3.2e-32 142.5 123 60.2
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 4.2e-32 142.1 126 56.3
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 5.5e-32 141.7 105 65.7
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 7.2e-32 141.4 100 69.0
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 1.2e-31 140.6 127 57.5
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 1.6e-31 140.2 132 62.9
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 2.1e-31 139.8 107 63.6
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 2.1e-31 139.8 170 47.1
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 4.7e-31 138.7 127 54.3
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 6.1e-31 138.3 125 53.6
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 6.1e-31 138.3 120 58.3
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 1.0e-30 137.5 125 56.8
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 1.4e-30 137.1 102 65.7
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.4e-30 137.1 128 54.7
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 1.8e-30 136.7 128 53.9
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.8e-30 136.7 108 61.1
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 1.8e-30 136.7 130 56.2
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 1.8e-30 136.7 122 55.7
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 2.3e-30 136.3 135 56.3
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 2.3e-30 136.3 133 56.4
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.3e-30 136.3 128 53.9
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.3e-30 136.3 128 53.9
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 2.3e-30 136.3 103 63.1
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 3.9e-30 135.6 186 45.2
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 5.2e-30 135.2 106 62.3
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.2e-30 135.2 127 52.8
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.2e-30 135.2 127 52.8
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 6.7e-30 134.8 127 54.3
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 6.7e-30 134.8 102 62.7
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 6.7e-30 134.8 107 62.6
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 1.1e-29 134.0 134 54.5
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 1.1e-29 134.0 126 54.8
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 1.5e-29 133.7 133 53.4
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.5e-29 133.7 128 53.1
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 5.7e-29 131.7 96 66.7
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 7.4e-29 131.3 126 54.8
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 2.8e-28 129.4 106 56.6
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 6.3e-28 128.3 131 54.2
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 8.2e-28 127.9 115 56.5
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 8.2e-28 127.9 111 59.5
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 1.1e-27 127.5 101 59.4
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 1.4e-27 127.1 100 59.0
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 1.4e-27 127.1 182 45.1
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 1.4e-27 127.1 182 45.1
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 1.4e-27 127.1 182 45.1
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 1.4e-27 127.1 117 56.4
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 1.8e-27 126.7 127 53.5
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 5.3e-27 125.2 191 51.8
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 3.5e-26 122.5 193 52.3
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 5.9e-26 121.7 140 53.6
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 7.7e-26 121.3 96 60.4
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 1.0e-25 120.9 125 52.8
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 1.3e-25 120.6 125 52.0
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 8.5e-25 117.9 145 48.3
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 1.1e-24 117.5 105 54.3
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 1.5e-24 117.1 85 64.7
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 2.2e-20 103.2 126 48.4
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 1.2e-18 97.4 64 73.4
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 8.5e-17 91.3 114 44.7
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 2.5e-16 89.7 101 48.5
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 5.5e-16 88.6 155 43.2
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 6.1e-15 85.1 44 86.4
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 3.0e-14 82.8 101 45.5
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 1.5e-13 80.5 45 80.0
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 2.0e-13 80.1 119 45.4
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 3.7e-12 75.9 143 36.4
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 3.7e-12 75.9 143 36.4
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 3.7e-12 75.9 48 68.8
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 6.3e-12 75.1 90 50.0
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 5.4e-11 72.0 53 60.4
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 2.9e-09 66.2 83 50.6
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 6.5e-09 65.1 89 44.9
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 1.9e-08 63.5 139 33.1
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 2.8e-07 59.7 61 49.2


User provided reference genes

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