Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00644 Aquilegia oxysepala HOM05D006624 ORTHO05D008209 6.6e-218 760.4 374 100.0
TAR629G2579 Trochodendron aralioides HOM05D006624 ORTHO05D008209 7.2e-140 501.1 354 68.1
Dinv25186 Davidia involucrata HOM05D006624 ORTHO05D008209 8.6e-125 451.1 369 59.6
Actinidia10881 Actinidia chinensis HOM05D006624 ORTHO05D008209 3.0e-122 442.6 369 59.6
Actinidia31470 Actinidia chinensis HOM05D006624 ORTHO05D008209 1.2e-121 440.7 369 58.3
CSS0000809 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 1.6e-118 430.3 355 58.3
Rhsim07G0122500 Rhododendron simsii HOM05D006624 ORTHO05D008209 6.0e-118 428.3 341 60.1
CSS0049781 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 7.8e-118 427.9 355 58.0
CiPaw.11G087800 Carya illinoinensis HOM05D006624 ORTHO05D008209 1.6e-115 420.2 352 58.5
Ciclev10031769m.g Citrus clementina HOM05D006624 ORTHO05D008209 2.8e-115 419.5 355 57.5
QL12p007008 Quercus lobata HOM05D006624 ORTHO05D008209 1.5e-113 413.7 351 55.6
GSVIVG01013232001 Vitis vinifera HOM05D006624 ORTHO05D008209 4.9e-112 408.7 350 57.4
PSO339G2002 Papaver somniferum HOM05D006624 ORTHO05D008209 1.9e-111 406.8 350 58.3
Sabra01G0115200 Salix brachista HOM05D006624 ORTHO05D008209 4.1e-111 405.6 357 56.0
PSO565G0001 Papaver somniferum HOM05D006624 ORTHO05D008209 3.0e-109 399.4 366 56.3
vmacro14109 Vaccinium macrocarpon HOM05D006624 ORTHO05D008209 6.6e-109 398.3 436 48.9
Potri.001G146500 Populus trichocarpa HOM05D006624 ORTHO05D008209 1.6e-107 393.7 358 54.7
TWI15G0738 Tripterygium wilfordii HOM05D006624 ORTHO05D008209 3.6e-107 392.5 333 56.2
Manes.17G019300 Manihot esculenta HOM05D006624 ORTHO05D008209 1.4e-106 390.6 354 55.1
Duzib068G0530 Durio zibethinus HOM05D006624 ORTHO05D008209 3.1e-106 389.4 350 54.3
Gorai.003G180000 Gossypium raimondii HOM05D006624 ORTHO05D008209 3.1e-106 389.4 339 55.2
PGSC0003DMG400024215 Solanum tuberosum HOM05D006624 ORTHO05D008209 3.1e-106 389.4 362 52.8
Haze_08295 Corylus avellana HOM05D006624 ORTHO05D008209 6.8e-106 388.3 351 55.3
CAN.G799.14 Capsicum annuum HOM05D006624 ORTHO05D008209 3.4e-105 386.0 362 53.6
Solyc08g077250.4 Solanum lycopersicum HOM05D006624 ORTHO05D008209 4.4e-105 385.6 362 52.5
PGR042G3682 Punica granatum HOM05D006624 ORTHO05D008209 5.8e-105 385.2 369 55.0
MD06G1040000 Malus domestica HOM05D006624 ORTHO05D008209 2.9e-104 382.9 356 54.8
CsaV3_3G049520 Cucumis sativus L. HOM05D006624 ORTHO05D008209 6.4e-104 381.7 370 51.9
Nitab4.5_0004327g0020 Nicotiana tabacum HOM05D006624 ORTHO05D008209 6.4e-104 381.7 363 52.3
Gohir.A03G002600 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.1e-103 380.9 364 51.9
Eucgr.E00310 Eucalyptus grandis HOM05D006624 ORTHO05D008209 4.1e-103 379.0 352 54.3
Nitab4.5_0002055g0180 Nicotiana tabacum HOM05D006624 ORTHO05D008209 9.2e-103 377.9 362 52.2
COL.COLO4_17108 Corchorus olitorius HOM05D000087 ORTHO05D008209 1.6e-102 377.1 352 53.1
Sc01g0007740 Simmondsia chinensis HOM05D006624 ORTHO05D008209 2.1e-102 376.7 340 54.7
Sopen08g025830 Solanum pennellii HOM05D006624 ORTHO05D008209 2.7e-102 376.3 362 51.4
ECA233G2124 Erigeron canadensis HOM05D006624 ORTHO05D008209 3.5e-102 375.9 353 54.1
Prupe.5G046100 Prunus persica HOM05D006624 ORTHO05D008209 4.6e-102 375.6 371 52.8
Cc08_g02070 Coffea canephora HOM05D006624 ORTHO05D008209 6.0e-102 375.2 352 54.0
Atru.chr6.1770 Acer truncatum HOM05D006624 ORTHO05D008209 1.3e-101 374.0 354 55.9
ClCG09G012360 Citrullus lanatus HOM05D006624 ORTHO05D008209 6.6e-101 371.7 361 50.7
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 3.3e-100 369.4 350 52.9
HanXRQChr08g0227961 Helianthus annuus HOM05D006624 ORTHO05D008209 4.3e-100 369.0 341 54.0
RcHm_v2.0_Chr7g0208351 Rosa chinensis HOM05D006624 ORTHO05D008209 9.5e-100 367.9 354 53.7
THA.LOC104827742 Tarenaya hassleriana HOM05D006624 ORTHO05D008209 2.1e-99 366.7 347 52.2
Sed0020690 Sechium edule HOM05D006624 ORTHO05D008209 8.1e-99 364.8 371 49.3
Thecc.03G233800 Theobroma cacao HOM05D006624 ORTHO05D008209 4.0e-98 362.5 352 52.8
TPR.G21431 Trifolium pratense HOM05D006624 ORTHO05D008209 2.6e-97 359.8 354 53.1
Psat2g174640 Pisum sativum HOM05D006624 ORTHO05D008209 2.2e-96 356.7 351 51.9
Phvul.002G004700 Phaseolus vulgaris HOM05D006624 ORTHO05D008209 2.9e-96 356.3 356 51.7
Medtr5g014010 Medicago truncatula HOM05D006624 ORTHO05D008209 8.4e-96 354.8 341 52.2
VMungo1215G2954 Vigna mungo HOM05D006624 ORTHO05D008209 3.2e-95 352.8 364 51.6
MSTRG.12153 Avicennia marina HOM05D006624 ORTHO05D008209 1.6e-94 350.5 354 53.7
Glyma.11G041200 Glycine max HOM05D006624 ORTHO05D008209 2.1e-94 350.1 356 50.8
Glyma.01G200900 Glycine max HOM05D006624 ORTHO05D008209 6.0e-94 348.6 369 49.9
Aa31LG9G6360 Aethionema arabicum HOM05D006624 ORTHO05D008209 7.8e-94 348.2 347 51.0
Migut.N01377 Erythranthe guttata HOM05D006624 ORTHO05D008209 1.3e-93 347.4 321 51.7
Hund14427 Selenicereus undatus HOM05D006624 ORTHO05D008209 2.3e-93 346.7 336 52.4
Gohir.D03G169701 Gossypium hirsutum HOM05D006624 ORTHO05D008209 3.0e-93 346.3 271 59.0
Lalb_Chr16g0379211 Lupinus albus HOM05D006624 ORTHO05D008209 3.0e-93 346.3 343 50.4
Lj2g0021367 Lotus japonicus HOM05D006624 ORTHO05D008209 5.1e-93 345.5 349 50.4
FvH4_5g21210 Fragaria vesca HOM05D006624 ORTHO05D008209 3.3e-92 342.8 345 50.7
FAN04G0639 Fragaria x ananassa HOM05D006624 ORTHO05D008209 3.3e-92 342.8 355 50.4
EL10Ac5g12192 Beta vulgaris HOM05D006624 ORTHO05D008209 9.6e-92 341.3 318 53.8
MELO3C003374.2 Cucumis melo HOM05D006624 ORTHO05D008209 9.6e-92 341.3 338 50.0
arahy.Tifrunner.gnm1.ann1.A7V6P3 Arachis hypogaea HOM05D006624 ORTHO05D008209 1.1e-90 337.8 374 49.5
BcaC06g31468 Brassica carinata HOM05D006624 ORTHO05D008209 5.3e-90 335.5 348 48.6
arahy.Tifrunner.gnm1.ann1.76B0S0 Arachis hypogaea HOM05D006624 ORTHO05D008209 6.9e-90 335.1 381 48.6
BcaC06g34373 Brassica carinata HOM05D006624 ORTHO05D008209 9.0e-90 334.7 352 48.0
DCAR_031785 Daucus carota HOM05D006624 ORTHO05D008209 1.2e-89 334.3 341 51.6
BraA06t27456Z Brassica rapa HOM05D006624 ORTHO05D008209 1.5e-89 334.0 352 48.6
Lsat_1_v5_gn_6_68241 Lactuca sativa HOM05D006624 ORTHO05D008209 3.4e-89 332.8 341 50.4
AL8G11790 Arabidopsis lyrata HOM05D006624 ORTHO05D008209 7.6e-89 331.6 354 50.0
Ah.07g200030 Amaranthus hybridus HOM05D006624 ORTHO05D008209 9.9e-89 331.3 329 50.8
A06p45890 Brassica napus HOM05D006624 ORTHO05D008209 1.3e-88 330.9 352 48.6
C07p29750 Brassica napus HOM05D006624 ORTHO05D008209 1.7e-88 330.5 348 47.7
BolC7t43526H Brassica oleracea HOM05D006624 ORTHO05D008209 2.9e-88 329.7 348 47.4
AUR62007233 Chenopodium quinoa HOM05D006624 ORTHO05D008209 2.9e-88 329.7 319 53.0
SGA_v2.0_scaffold36G14316 Striga asiatica HOM05D006624 ORTHO05D008209 8.4e-88 328.2 341 50.1
AUR62018767 Chenopodium quinoa HOM05D006624 ORTHO05D008209 1.1e-87 327.8 318 52.5
FAN08G0242 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.4e-87 327.4 357 48.2
CDE04G3153 Ceratophyllum demersum HOM05D006624 ORTHO05D008209 3.2e-87 326.2 318 53.8
MBI04_g31972_MAGBIO Magnolia biondii HOM05D006624 ORTHO05D008209 1.3e-85 320.9 382 48.2
ATR1101G009 Amborella trichopoda HOM05D006624 ORTHO05D008209 3.0e-85 319.7 332 50.0
AT5G46560 Arabidopsis thaliana HOM05D006624 ORTHO05D008209 5.1e-85 318.9 351 49.0
Zm00001eb000170 Zea mays HOM05D006624 ORTHO05D008209 8.4e-80 301.6 341 44.9
FAN18G2886 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.9e-79 300.4 370 45.1
Carub.0008s0136 Capsella rubella HOM05D006624 ORTHO05D008209 3.5e-78 296.2 338 47.6
SalBow6G4456 Salvia bowleyana HOM05D006624 ORTHO05D008209 1.0e-77 294.7 473 38.1
QL12p007029 Quercus lobata HOM05D006624 ORTHO05D008209 7.9e-70 268.5 252 49.6
Lj2A246G27 Lonicera japonica HOM05D006624 ORTHO05D008209 2.5e-68 263.5 274 51.5
Thhalv10000965m.g Eutrema salsugineum HOM05D006624 ORTHO05D008209 4.8e-67 259.2 303 45.2
Cpa.g.sc6.412 Carica papaya HOM05D006624 ORTHO05D008209 8.2e-67 258.5 242 53.7
Mapoly0037s0054 Marchantia polymorpha HOM05D006624 ORTHO05D008209 3.3e-60 236.5 344 39.0
Peaxi162Scf00084g00925 Petunia axillaris HOM05D006624 ORTHO05D008209 1.2e-57 228.0 193 58.5
Ca_24634_v3 Cicer arietinum L. HOM05D006624 ORTHO05D008209 3.8e-56 223.0 182 61.0
Pp3c26_11390 Physcomitrium patens HOM05D006624 ORTHO05D008209 3.8e-56 223.0 320 39.7
SEGI_35168 Sequoiadendron giganteum HOM05D006624 ORTHO05D008209 6.5e-56 222.2 290 41.7
Hma1.2p1_3049F.1_g332130 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 2.0e-52 210.7 302 42.1
Gorai.001G276000 Gossypium raimondii HOM05D006624 ORTHO05D008209 4.3e-52 209.5 254 42.9
FAN13G3188 Fragaria x ananassa HOM05D006624 ORTHO05D008209 4.8e-51 206.1 194 56.7
Gorai.004G193000 Gossypium raimondii HOM05D006624 ORTHO05D008209 3.8e-48 196.4 219 44.3
CARHR175020 Cardamine hirsuta HOM05D006624 ORTHO05D008209 6.5e-48 195.7 215 44.7
Hma1.2p1_3049F.1_g332131 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 2.5e-39 167.2 124 67.7
Hma1.2p1_0414F.1_g147760 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 1.0e-37 161.8 133 53.4
Gorai.013G102100 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.0e-36 157.5 148 51.4
SpUn0632_0010 Schrenkiella parvula HOM05D006624 ORTHO05D008209 4.8e-35 152.9 231 38.5
CBR_g18557 Chara braunii HOM05D006624 ORTHO05D008209 4.1e-34 149.8 260 35.8
Duzib084G0908 Durio zibethinus HOM05D006624 ORTHO05D008209 2.0e-28 131.0 123 48.8
Peaxi162Scf00084g00918 Petunia axillaris HOM05D006624 ORTHO05D008209 5.7e-28 129.4 131 49.6
Gorai.004G213700 Gossypium raimondii HOM05D006624 ORTHO05D008209 4.5e-25 119.8 222 33.3
AagrBONN_evm.TU.Sc2ySwM_362.2673 Anthoceros agrestis HOM05D006624 ORTHO05D008209 7.7e-25 119.0 202 31.7
arahy.Tifrunner.gnm1.ann1.PE2WYP Arachis hypogaea HOM05D006624 ORTHO05D008209 8.5e-24 115.5 191 38.2
Os03g0100050 Oryza sativa ssp. japonica HOM05D006624 ORTHO05D008209 2.2e-19 100.9 110 42.7
Gorai.001G079600 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.4e-18 97.4 86 50.0
Gohir.D11G288800 Gossypium hirsutum HOM05D000724 ORTHO05D011687 1.6e-14 84.7 105 41.9
Gohir.D08G202450 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.5e-12 78.2 76 51.3
Gohir.D07G137300 Gossypium hirsutum HOM05D006624 ORTHO05D008209 2.0e-12 77.8 70 51.4
arahy.Tifrunner.gnm1.ann1.HID3FF Arachis hypogaea HOM05D006624 ORTHO05D008209 1.6e-09 68.2 112 34.8
Gorai.007G312600 Gossypium raimondii HOM05D000724 ORTHO05D011687 5.0e-08 63.2 132 28.8
CBR_g30426 Chara braunii HOM05D006624 ORTHO05D008209 1.6e-06 58.2 41 58.5


User provided reference genes

Program Settings