Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00540 Aquilegia oxysepala HOM05D006684 ORTHO05D008443 1.5e-122 443.0 244 100.0
TAR636G0929 Trochodendron aralioides HOM05D006684 ORTHO05D008443 9.1e-59 231.1 241 56.0
Nn6g34351 Nelumbo nucifera HOM05D006684 ORTHO05D008443 6.7e-54 214.9 238 52.5
Dinv32395 Davidia involucrata HOM05D006684 ORTHO05D008443 2.0e-53 213.4 237 54.4
Atru.chr5.338 Acer truncatum HOM05D006684 ORTHO05D008443 1.1e-51 207.6 237 53.6
Ciclev10022036m.g Citrus clementina HOM05D006684 ORTHO05D008443 9.1e-51 204.5 246 52.4
GSVIVG01027546001 Vitis vinifera HOM05D006684 ORTHO05D008443 4.5e-50 202.2 239 52.3
CSS0020305 Camellia sinensis var. sinensis HOM05D006684 ORTHO05D008443 1.0e-49 201.1 241 51.9
CiPaw.01G260000 Carya illinoinensis HOM05D006684 ORTHO05D008443 3.8e-49 199.1 237 51.5
Cfa010232 Carpinus fangiana HOM05D006684 ORTHO05D008443 6.5e-49 198.4 235 51.5
MELO3C022508.2 Cucumis melo HOM05D006684 ORTHO05D008443 8.5e-49 198.0 238 52.9
Cpa.g.sc18.149 Carica papaya HOM05D006684 ORTHO05D008443 1.9e-48 196.8 245 51.8
Sed0022399 Sechium edule HOM05D006684 ORTHO05D008443 1.8e-46 190.3 244 49.6
QL08p051764 Quercus lobata HOM05D006684 ORTHO05D008443 5.7e-45 185.3 244 48.8
PSO478G1842 Papaver somniferum HOM05D006684 ORTHO05D008443 9.8e-45 184.5 244 54.5
COL.COLO4_12585 Corchorus olitorius HOM05D006684 ORTHO05D008443 4.8e-44 182.2 247 48.6
Prupe.2G148900 Prunus persica HOM05D006684 ORTHO05D008443 4.8e-44 182.2 245 50.2
Cc02_g36430 Coffea canephora HOM05D006684 ORTHO05D008443 1.1e-43 181.0 245 44.1
Nitab4.5_0010110g0010 Nicotiana tabacum HOM05D006684 ORTHO05D008443 2.7e-42 176.4 240 47.1
CsaV3_6G006090 Cucumis sativus L. HOM05D006684 ORTHO05D008443 3.5e-42 176.0 248 46.8
CANSAT94G0012 Cannabis sativa HOM05D006684 ORTHO05D008443 7.7e-42 174.9 240 47.9
LjContig00136g0018410 Lotus japonicus HOM05D006684 ORTHO05D008443 1.7e-41 173.7 239 46.9
MD02G1199700 Malus domestica HOM05D006684 ORTHO05D008443 1.7e-41 173.7 237 48.5
Hund17005 Selenicereus undatus HOM05D006684 ORTHO05D008443 5.0e-41 172.2 241 50.2
PGSC0003DMG400021635 Solanum tuberosum HOM05D006684 ORTHO05D008443 8.6e-41 171.4 235 48.1
Sopen05g028070 Solanum pennellii HOM05D006684 ORTHO05D008443 3.3e-40 169.5 235 48.1
Gohir.D11G086900 Gossypium hirsutum HOM05D006684 ORTHO05D008443 4.2e-40 169.1 231 45.5
Gorai.007G092800 Gossypium raimondii HOM05D006684 ORTHO05D008443 4.2e-40 169.1 231 45.0
CDE04G1869 Ceratophyllum demersum HOM05D006684 ORTHO05D008443 5.5e-40 168.7 245 48.2
RcHm_v2.0_Chr1g0351131 Rosa chinensis HOM05D006684 ORTHO05D008443 2.1e-39 166.8 238 49.6
Gohir.A11G082800 Gossypium hirsutum HOM05D006684 ORTHO05D008443 8.0e-39 164.9 231 45.5
TWI59G0969 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 2.3e-38 163.3 235 45.5
FvH4_7g12340 Fragaria vesca HOM05D006684 ORTHO05D008443 2.6e-37 159.8 238 48.3
FAN06G2821 Fragaria x ananassa HOM05D006684 ORTHO05D008443 2.6e-37 159.8 238 48.3
FAN06G3889 Fragaria x ananassa HOM05D006684 ORTHO05D008443 2.6e-37 159.8 238 48.3
EL10Ac1g00926 Beta vulgaris HOM05D006684 ORTHO05D008443 3.4e-37 159.5 257 44.0
Thecc.01G373000 Theobroma cacao HOM05D006684 ORTHO05D008443 7.5e-37 158.3 231 43.7
Sp4g27550 Schrenkiella parvula HOM05D006684 ORTHO05D008443 9.8e-37 157.9 242 44.2
FAN10G0264 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.7e-36 157.1 238 48.3
Glyma.09G267200 Glycine max HOM05D006684 ORTHO05D008443 3.7e-36 156.0 237 46.4
Eucgr.E01357 Eucalyptus grandis HOM05D006684 ORTHO05D008443 8.3e-36 154.8 242 44.2
ECA240G0119 Erigeron canadensis HOM05D006684 ORTHO05D008443 1.1e-35 154.5 243 41.6
ClCG06G000300 Citrullus lanatus HOM05D006684 ORTHO05D008443 1.4e-35 154.1 283 39.9
BcaB06g29418 Brassica carinata HOM05D006684 ORTHO05D008443 1.8e-35 153.7 240 45.8
SGA_v2.0_scaffold11G05605 Striga asiatica HOM05D006684 ORTHO05D008443 2.4e-35 153.3 236 43.2
FAN01G2432 Fragaria x ananassa HOM05D006684 ORTHO05D008443 5.4e-35 152.1 238 47.1
PGR042G1390 Punica granatum HOM05D006684 ORTHO05D008443 5.4e-35 152.1 239 44.4
C04p71620 Brassica napus HOM05D000147 ORTHO05D007841 7.0e-35 151.8 239 43.5
BolC4t28667H Brassica oleracea HOM05D000147 ORTHO05D007841 7.0e-35 151.8 239 46.0
BraA04t18849Z Brassica rapa HOM05D000147 ORTHO05D007841 1.2e-34 151.0 240 48.8
FAN03G1779 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.6e-34 150.6 248 45.6
BcaC02g07085 Brassica carinata HOM05D006684 ORTHO05D008443 2.7e-34 149.8 247 49.0
Os06g0129800 Oryza sativa ssp. japonica HOM05D006684 ORTHO05D008443 2.7e-34 149.8 244 43.4
Thhalv10001611m.g Eutrema salsugineum HOM05D006684 ORTHO05D008443 4.5e-34 149.1 241 42.3
SalBow5G0966 Salvia bowleyana HOM05D006684 ORTHO05D008443 2.3e-33 146.7 238 43.7
Aa31LG1G27020 Aethionema arabicum HOM05D006684 ORTHO05D008443 2.9e-33 146.4 250 43.6
SalBow5G5079 Salvia bowleyana HOM05D006684 ORTHO05D008443 2.9e-33 146.4 238 43.7
Sc02g0002410 Simmondsia chinensis HOM05D006684 ORTHO05D008443 5.0e-33 145.6 217 44.7
AL4G44700 Arabidopsis lyrata HOM05D006684 ORTHO05D008443 6.6e-33 145.2 241 42.3
HanXRQChr03g0093671 Helianthus annuus HOM05D006684 ORTHO05D008443 6.6e-33 145.2 236 42.4
Hma1.2p1_0053F.1_g030880 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 1.1e-32 144.4 245 46.5
FAN10G2097 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.5e-32 144.1 238 45.8
Potri.014G072400 Populus trichocarpa HOM05D006684 ORTHO05D008443 1.5e-32 144.1 253 42.7
Manes.12G048300 Manihot esculenta HOM05D006684 ORTHO05D008443 2.5e-32 143.3 245 42.9
THA.LOC104801995 Tarenaya hassleriana HOM05D006684 ORTHO05D008443 2.5e-32 143.3 238 42.4
Manes.05G043400 Manihot esculenta HOM05D006684 ORTHO05D008443 3.3e-32 142.9 239 40.2
Lalb_Chr03g0039091 Lupinus albus HOM05D006684 ORTHO05D008443 4.3e-32 142.5 238 41.2
MSTRG.4882 Avicennia marina HOM05D006684 ORTHO05D008443 5.6e-32 142.1 241 42.7
arahy.Tifrunner.gnm1.ann1.3Z62KU Arachis hypogaea HOM05D006684 ORTHO05D008443 1.2e-31 141.0 237 41.4
Phvul.008G074700 Phaseolus vulgaris HOM05D006684 ORTHO05D008443 1.2e-31 141.0 240 42.1
A04p33890 Brassica napus HOM05D000147 ORTHO05D007841 2.1e-31 140.2 240 47.1
CARHR140710 Cardamine hirsuta HOM05D006684 ORTHO05D008443 3.6e-31 139.4 241 41.5
Zm00001eb378390 Zea mays HOM05D006684 ORTHO05D008443 4.7e-31 139.0 250 41.6
VMungo1383G3715 Vigna mungo HOM05D006684 ORTHO05D008443 8.0e-31 138.3 241 42.3
Carub.0004s2814 Capsella rubella HOM05D006684 ORTHO05D008443 1.8e-30 137.1 241 44.0
vmacro20994 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 5.2e-30 135.6 356 34.3
BolC4t22271H Brassica oleracea HOM05D006684 ORTHO05D008443 1.2e-29 134.4 240 42.5
Lsat_1_v5_gn_3_135520 Lactuca sativa HOM05D006684 ORTHO05D008443 1.2e-29 134.4 241 41.9
arahy.Tifrunner.gnm1.ann1.CFQ18P Arachis hypogaea HOM05D006684 ORTHO05D008443 2.6e-29 133.3 237 39.7
Duzib133G0994 Durio zibethinus HOM05D006684 ORTHO05D008443 5.8e-29 132.1 239 39.7
AT2G45520 Arabidopsis thaliana HOM05D006684 ORTHO05D008443 1.7e-28 130.6 241 41.5
Peaxi162Scf00207g00165 Petunia axillaris HOM05D006684 ORTHO05D008443 3.7e-28 129.4 244 39.3
Nitab4.5_0001702g0200 Nicotiana tabacum HOM05D006684 ORTHO05D008443 4.1e-27 125.9 240 38.8
AUR62004244 Chenopodium quinoa HOM05D006684 ORTHO05D008443 7.0e-27 125.2 225 40.4
Medtr7g075640 Medicago truncatula HOM05D006684 ORTHO05D008443 2.0e-26 123.6 235 40.0
Rhsim01G0161500 Rhododendron simsii HOM05D006684 ORTHO05D008443 2.0e-26 123.6 110 62.7
TPR.G37765 Trifolium pratense HOM05D006684 ORTHO05D008443 3.5e-26 122.9 239 38.9
Duzib138G0092 Durio zibethinus HOM05D006684 ORTHO05D008443 4.6e-26 122.5 146 51.4
PSO782G3084 Papaver somniferum HOM05D006684 ORTHO05D008443 4.6e-26 122.5 189 47.1
Solyc05g048750.3 Solanum lycopersicum HOM05D006684 ORTHO05D008443 1.0e-25 121.3 143 53.8
Migut.N01586 Erythranthe guttata HOM05D006684 ORTHO05D008443 2.3e-25 120.2 150 50.7
CAN.G333.1 Capsicum annuum HOM05D006684 ORTHO05D008443 8.6e-25 118.2 235 40.4
Manes.12G048301 Manihot esculenta HOM05D006684 ORTHO05D008443 1.5e-24 117.5 237 40.9
Ah.07g198740 Amaranthus hybridus HOM05D006684 ORTHO05D008443 7.3e-24 115.2 207 38.6
Duzib138G0657 Durio zibethinus HOM05D006684 ORTHO05D008443 1.2e-23 114.4 139 50.4
ATR0757G101 Amborella trichopoda HOM05D006684 ORTHO05D008443 2.8e-23 113.2 146 49.3
Manes.12G053501 Manihot esculenta HOM05D006684 ORTHO05D008443 4.0e-22 109.4 237 39.7
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 8.9e-22 108.2 156 46.2
MBI12_g38018_MAGBIO Magnolia biondii HOM05D006684 ORTHO05D008443 1.5e-21 107.5 166 47.0
BraA05t19524Z Brassica rapa HOM05D006684 ORTHO05D008443 2.0e-21 107.1 232 40.1
AUR62013604 Chenopodium quinoa HOM05D006684 ORTHO05D008443 2.0e-21 107.1 239 36.0
Oeu036610.1 Olea europaea HOM05D006684 ORTHO05D008443 6.4e-20 102.1 78 66.7
Haze_16738 Corylus avellana HOM05D006684 ORTHO05D008443 3.2e-19 99.8 155 45.2
SEGI_35511 Sequoiadendron giganteum HOM05D006684 ORTHO05D008443 4.1e-19 99.4 241 36.1
Pp3c22_10350 Physcomitrium patens HOM05D006684 ORTHO05D008443 7.0e-19 98.6 247 33.2
TWI23G1019 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 1.6e-18 97.4 105 51.4
SGA_v2.0_scaffold43G16466 Striga asiatica HOM05D006684 ORTHO05D008443 1.7e-17 94.0 120 49.2
Haze_16739 Corylus avellana HOM05D006684 ORTHO05D008443 3.3e-16 89.7 65 63.1
unitig_578.g16483 Utricularia gibba HOM05D006684 ORTHO05D008443 5.6e-16 89.0 235 32.3
vmacro20995 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 9.5e-16 88.2 127 45.7
Ca_07836_v3 Cicer arietinum L. HOM05D006684 ORTHO05D008443 2.1e-15 87.0 65 63.1
Psat3g104080 Pisum sativum HOM05D006684 ORTHO05D008443 5.8e-13 79.0 96 44.8
SMO347G0023 Selaginella moellendorffii HOM05D006684 ORTHO05D008443 1.3e-12 77.8 245 31.4
AagrBONN_evm.TU.Sc2ySwM_344.4110 Anthoceros agrestis HOM05D006684 ORTHO05D008443 2.9e-12 76.6 233 30.5
HPP92_020257 Vanilla planifolia HOM05D006684 ORTHO05D008443 2.9e-12 76.6 216 32.4
Zm00001eb269540 Zea mays HOM05D006684 ORTHO05D008443 2.9e-12 76.6 91 49.5
Actinidia33456 Actinidia chinensis HOM05D006684 ORTHO05D008443 4.9e-12 75.9 150 38.7
Mapoly0084s0081 Marchantia polymorpha HOM05D006684 ORTHO05D008443 2.4e-11 73.6 248 33.5
Hma1.2p1_0053F.1_g030890 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 1.7e-09 67.4 102 44.1


User provided reference genes

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