Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00483 Aquilegia oxysepala HOM05D004815 ORTHO05D005742 5.0e-210 734.2 368 100.0
TAR629G0568 Trochodendron aralioides HOM05D004815 ORTHO05D005742 1.6e-147 526.6 371 72.2
TAR636G2513 Trochodendron aralioides HOM05D004815 ORTHO05D005742 1.8e-143 513.1 369 70.2
Atru.chr5.381_Atru.chr5.382 Acer truncatum HOM05D004815 ORTHO05D005742 7.6e-142 507.7 368 70.9
Haze_16704 Corylus avellana HOM05D004815 ORTHO05D005742 3.9e-138 495.4 371 69.3
Potri.002G152300 Populus trichocarpa HOM05D004815 ORTHO05D005742 1.1e-137 493.8 368 69.0
CiPaw.01G257600 Carya illinoinensis HOM05D004815 ORTHO05D005742 6.2e-136 488.0 371 67.1
Manes.05G040900 Manihot esculenta HOM05D004815 ORTHO05D005742 6.2e-136 488.0 371 68.2
Gohir.A07G144600 Gossypium hirsutum HOM05D004815 ORTHO05D005742 3.1e-135 485.7 372 68.0
TWI59G0538 Tripterygium wilfordii HOM05D004815 ORTHO05D005742 5.3e-135 485.0 371 67.1
MD02G1195800 Malus domestica HOM05D004815 ORTHO05D005742 1.5e-134 483.4 371 66.6
Actinidia31455 Actinidia chinensis HOM05D004815 ORTHO05D005742 3.4e-134 482.3 376 66.5
Potri.014G078300 Populus trichocarpa HOM05D004815 ORTHO05D005742 2.9e-133 479.2 368 68.8
TWI23G0970 Tripterygium wilfordii HOM05D004815 ORTHO05D005742 4.9e-133 478.4 368 66.6
GSVIVG01027589001 Vitis vinifera HOM05D004815 ORTHO05D005742 8.4e-133 477.6 371 66.8
RcHm_v2.0_Chr1g0351921 Rosa chinensis HOM05D004815 ORTHO05D005742 1.4e-132 476.9 371 65.5
Cfa001810 Carpinus fangiana HOM05D004815 ORTHO05D005742 4.2e-132 475.3 373 67.3
Duzib133G0793 Durio zibethinus HOM05D004815 ORTHO05D005742 4.2e-132 475.3 373 66.5
Glyma.03G018700 Glycine max HOM05D004815 ORTHO05D005742 5.5e-132 474.9 371 67.4
Cpa.g.sc18.178 Carica papaya HOM05D004815 ORTHO05D005742 9.3e-132 474.2 370 66.5
Gorai.001G172600 Gossypium raimondii HOM05D004815 ORTHO05D005742 9.3e-132 474.2 372 66.9
Ciclev10020702m.g Citrus clementina HOM05D004815 ORTHO05D005742 1.2e-131 473.8 371 66.3
Thecc.01G370200 Theobroma cacao HOM05D004815 ORTHO05D005742 1.2e-131 473.8 372 67.5
Gohir.D07G150500 Gossypium hirsutum HOM05D004815 ORTHO05D005742 3.5e-131 472.2 372 66.9
Manes.01G263200 Manihot esculenta HOM05D004815 ORTHO05D005742 4.6e-131 471.9 371 67.4
MBI04_g28567_MAGBIO Magnolia biondii HOM05D004815 ORTHO05D005742 3.9e-130 468.8 355 67.6
Sabra14G0053800 Salix brachista HOM05D004815 ORTHO05D005742 6.7e-130 468.0 376 67.6
Lj7C524T7 Lonicera japonica HOM05D004815 ORTHO05D005742 1.1e-129 467.2 368 64.7
MELO3C022521.2 Cucumis melo HOM05D004815 ORTHO05D005742 1.5e-129 466.8 371 65.2
CsaV3_6G005940 Cucumis sativus L. HOM05D004815 ORTHO05D005742 2.5e-129 466.1 371 65.5
Medtr8g033040 Medicago truncatula HOM05D004815 ORTHO05D005742 1.1e-127 460.7 368 65.2
Lj3g0020425 Lotus japonicus HOM05D004815 ORTHO05D005742 4.0e-127 458.8 371 65.0
Lalb_Chr17g0340041 Lupinus albus HOM05D004815 ORTHO05D005742 4.0e-127 458.8 371 64.7
PSO478G4379 Papaver somniferum HOM05D004815 ORTHO05D005742 4.0e-127 458.8 371 63.1
TPR.G17395 Trifolium pratense HOM05D004815 ORTHO05D005742 4.0e-127 458.8 369 65.6
Ca_23774_v3 Cicer arietinum L. HOM05D004815 ORTHO05D005742 9.0e-127 457.6 368 64.9
Cc09_g02920 Coffea canephora HOM05D004815 ORTHO05D005742 2.0e-126 456.4 368 63.3
Lalb_Chr10g0097591 Lupinus albus HOM05D004815 ORTHO05D005742 3.4e-126 455.7 371 63.9
VMungo0331G0142 Vigna mungo HOM05D004815 ORTHO05D005742 5.8e-126 454.9 371 65.8
arahy.Tifrunner.gnm1.ann1.32Q5MD Arachis hypogaea HOM05D004815 ORTHO05D005742 1.3e-125 453.8 371 65.2
arahy.Tifrunner.gnm1.ann1.GZV6IQ Arachis hypogaea HOM05D004815 ORTHO05D005742 1.3e-125 453.8 371 65.0
PSO782G2788 Papaver somniferum HOM05D004815 ORTHO05D005742 1.9e-124 449.9 371 62.5
FAN01G1324 Fragaria x ananassa HOM05D004815 ORTHO05D005742 2.5e-124 449.5 371 62.0
Glyma.07G080200 Glycine max HOM05D004815 ORTHO05D005742 5.5e-124 448.4 354 67.8
Cc02_g37080 Coffea canephora HOM05D004815 ORTHO05D005742 9.3e-124 447.6 369 62.6
Sed0027777 Sechium edule HOM05D004815 ORTHO05D005742 1.6e-123 446.8 372 62.6
AUR62033376 Chenopodium quinoa HOM05D004815 ORTHO05D005742 2.1e-123 446.4 372 64.0
FAN10G2694 Fragaria x ananassa HOM05D004815 ORTHO05D005742 4.6e-123 445.3 371 61.7
TPR.G17590 Trifolium pratense HOM05D004815 ORTHO05D005742 4.6e-123 445.3 365 63.3
HanXRQChr06g0169351 Helianthus annuus HOM05D004815 ORTHO05D005742 7.9e-123 444.5 370 62.4
EL10Ac1g00976 Beta vulgaris HOM05D004815 ORTHO05D005742 3.9e-122 442.2 374 62.8
Sabra02G0120600 Salix brachista HOM05D004815 ORTHO05D005742 1.5e-121 440.3 368 64.7
CANSAT56G0719 Cannabis sativa HOM05D004815 ORTHO05D005742 4.3e-121 438.7 372 62.1
PGR031G2979 Punica granatum HOM05D004815 ORTHO05D005742 1.6e-120 436.8 370 61.6
Nitab4.5_0013229g0020 Nicotiana tabacum HOM05D004815 ORTHO05D005742 1.1e-119 434.1 370 59.2
Rhsim07G0022400 Rhododendron simsii HOM05D004815 ORTHO05D005742 9.0e-119 431.0 363 62.8
ECA236G5005 Erigeron canadensis HOM05D004815 ORTHO05D005742 2.0e-118 429.9 371 61.2
Migut.B01673 Erythranthe guttata HOM05D004815 ORTHO05D005742 5.9e-118 428.3 368 60.3
PGSC0003DMG400000005 Solanum tuberosum HOM05D004815 ORTHO05D005742 1.0e-117 427.6 370 58.6
FAN06G3277 Fragaria x ananassa HOM05D004815 ORTHO05D005742 3.8e-117 425.6 368 60.1
FAN06G3416 Fragaria x ananassa HOM05D004815 ORTHO05D005742 3.8e-117 425.6 368 60.1
SGA_v2.0_scaffold153G37057 Striga asiatica HOM05D004815 ORTHO05D005742 8.5e-117 424.5 368 60.1
MSTRG.20784 Avicennia marina HOM05D004815 ORTHO05D005742 1.1e-116 424.1 372 59.7
Solyc01g091900.3 Solanum lycopersicum HOM05D004815 ORTHO05D005742 2.5e-116 422.9 371 58.5
Lalb_Chr19g0127171 Lupinus albus HOM05D004815 ORTHO05D005742 5.5e-116 421.8 375 60.5
Nn1g01309 Nelumbo nucifera HOM05D004815 ORTHO05D005742 2.1e-115 419.9 324 65.7
CAN.G170.62 Capsicum annuum HOM05D004815 ORTHO05D005742 4.6e-115 418.7 370 57.3
DCAR_006900 Daucus carota HOM05D004815 ORTHO05D005742 1.0e-114 417.5 345 62.9
Lsat_1_v5_gn_7_8041 Lactuca sativa HOM05D004815 ORTHO05D005742 1.0e-114 417.5 356 60.7
vmacro13348 Vaccinium macrocarpon HOM05D004815 ORTHO05D005742 1.0e-114 417.5 402 57.2
ClCG06G000170 Citrullus lanatus HOM05D004815 ORTHO05D005742 1.8e-114 416.8 371 60.6
Phvul.010G089200 Phaseolus vulgaris HOM05D004815 ORTHO05D005742 3.0e-114 416.0 348 65.8
Psat4g200880 Pisum sativum HOM05D004815 ORTHO05D005742 8.8e-114 414.5 350 63.7
QL08p050919 Quercus lobata HOM05D004815 ORTHO05D005742 1.1e-113 414.1 347 62.8
SalBow7G0216 Salvia bowleyana HOM05D004815 ORTHO05D005742 4.3e-113 412.1 415 54.7
HanXRQChr04g0121731 Helianthus annuus HOM05D004815 ORTHO05D005742 7.4e-113 411.4 352 61.1
Hund27330 Selenicereus undatus HOM05D004815 ORTHO05D005742 1.7e-112 410.2 388 59.0
Sc02g0002260 Simmondsia chinensis HOM05D004815 ORTHO05D005742 1.0e-109 401.0 360 59.4
Duzib138G1778 Durio zibethinus HOM05D004815 ORTHO05D005742 2.2e-109 399.8 350 62.0
Oeu059223.1 Olea europaea HOM05D003859 ORTHO05D004927 8.5e-109 397.9 372 58.9
Sp4g27730 Schrenkiella parvula HOM05D004815 ORTHO05D005742 4.2e-108 395.6 377 57.0
Carub.0004s2834 Capsella rubella HOM05D004815 ORTHO05D005742 9.4e-108 394.4 379 58.6
Peaxi162Scf00021g00232 Petunia axillaris HOM05D004815 ORTHO05D005742 1.6e-107 393.7 347 58.8
AL4G44860 Arabidopsis lyrata HOM05D004815 ORTHO05D005742 2.1e-107 393.3 379 57.5
Aa31LG1G27160 Aethionema arabicum HOM05D004815 ORTHO05D005742 3.6e-107 392.5 375 57.1
Actinidia09581 Actinidia chinensis HOM05D004815 ORTHO05D005742 1.0e-106 391.0 322 63.0
A05p05650 Brassica napus HOM05D004815 ORTHO05D005742 1.5e-105 387.1 378 56.9
BcaB01g03258 Brassica carinata HOM05D004815 ORTHO05D005742 2.0e-105 386.7 375 56.3
BraA05t19537Z Brassica rapa HOM05D004815 ORTHO05D005742 2.0e-105 386.7 378 56.9
C03p30200 Brassica napus HOM05D004815 ORTHO05D005742 2.6e-105 386.3 378 55.8
AT2G45690 Arabidopsis thaliana HOM05D004815 ORTHO05D005742 3.3e-105 386.0 378 56.3
A03p25310 Brassica napus HOM05D004815 ORTHO05D005742 4.4e-105 385.6 377 56.8
BcaC02g12192 Brassica carinata HOM05D004815 ORTHO05D005742 1.7e-104 383.6 378 56.3
BcaC01g05112 Brassica carinata HOM05D004815 ORTHO05D005742 3.7e-104 382.5 379 55.1
BolC3t15369H Brassica oleracea HOM05D004815 ORTHO05D005742 1.1e-103 380.9 378 55.0
BolC4t22283H Brassica oleracea HOM05D004815 ORTHO05D005742 1.8e-103 380.2 378 55.8
Prupe.2G152800 Prunus persica HOM05D004815 ORTHO05D005742 2.4e-103 379.8 305 67.5
Thhalv10001499m.g Eutrema salsugineum HOM05D004815 ORTHO05D005742 1.7e-101 373.6 376 55.3
FvH4_7g12840 Fragaria vesca HOM05D004815 ORTHO05D005742 2.9e-101 372.9 330 59.1
AUR62004281 Chenopodium quinoa HOM05D004815 ORTHO05D005742 2.5e-100 369.8 372 55.6
BcaB02g09018 Brassica carinata HOM05D004815 ORTHO05D005742 5.5e-100 368.6 383 53.5
MD02G1195700 Malus domestica HOM05D004815 ORTHO05D005742 5.5e-100 368.6 339 58.7
BraA03t11735Z Brassica rapa HOM05D004815 ORTHO05D005742 7.2e-100 368.2 377 54.9
unitig_749.g14360 Utricularia gibba HOM05D003518 ORTHO05D005164 3.6e-99 365.9 349 57.6
Ciclev10023945m.g Citrus clementina HOM05D004815 ORTHO05D005742 8.0e-99 364.8 368 54.9
CAN.G919.13 Capsicum annuum HOM05D004815 ORTHO05D005742 5.7e-97 358.6 371 49.3
Sed0004795 Sechium edule HOM05D004815 ORTHO05D005742 2.4e-95 353.2 301 61.5
HPP92_004960 Vanilla planifolia HOM05D004815 ORTHO05D005742 4.1e-95 352.4 374 49.5
Nitab4.5_0001901g0030 Nicotiana tabacum HOM05D004815 ORTHO05D005742 1.2e-94 350.9 368 49.5
C04p06610 Brassica napus HOM05D004815 ORTHO05D005742 1.6e-94 350.5 357 55.2
Solyc06g074460.4 Solanum lycopersicum HOM05D004815 ORTHO05D005742 2.0e-94 350.1 371 47.4
Sopen06g030930 Solanum pennellii HOM05D004815 ORTHO05D005742 5.9e-94 348.6 371 47.7
Ah.15g094120 Amaranthus hybridus HOM05D001215 ORTHO05D001387 7.7e-94 348.2 388 52.1
Lalb_Chr01g0021231 Lupinus albus HOM05D004815 ORTHO05D005742 2.2e-93 346.7 368 53.5
Nitab4.5_0005459g0020 Nicotiana tabacum HOM05D004815 ORTHO05D005742 8.5e-93 344.7 392 48.0
THA.LOC104817269 Tarenaya hassleriana HOM05D004815 ORTHO05D005742 1.9e-92 343.6 333 56.5
Zm00001eb208530 Zea mays HOM05D004815 ORTHO05D005742 5.5e-92 342.0 382 48.7
Sopen01g037670 Solanum pennellii HOM05D004815 ORTHO05D005742 8.0e-91 338.2 323 55.4
Peaxi162Scf00114g00211 Petunia axillaris HOM05D004815 ORTHO05D005742 2.2e-88 330.1 347 49.6
SEGI_15318 Sequoiadendron giganteum HOM05D004815 ORTHO05D005742 2.3e-82 310.1 383 44.9
Nitab4.5_0001127g0010 Nicotiana tabacum HOM05D004815 ORTHO05D005742 5.2e-82 308.9 375 48.3
Dinv43746 Davidia involucrata HOM05D004815 ORTHO05D005742 1.1e-79 301.2 299 55.9
Os02g0123200 Oryza sativa ssp. japonica HOM05D004815 ORTHO05D005742 2.5e-76 290.0 339 47.2
COL.COLO4_12639 Corchorus olitorius HOM05D004815 ORTHO05D005742 5.5e-76 288.9 209 69.4
SHI13492 Sapria himalayana HOM05D004815 ORTHO05D005742 7.5e-73 278.5 484 39.7
CARHR140910 Cardamine hirsuta HOM05D004815 ORTHO05D005742 1.8e-71 273.9 298 54.7
Mapoly0047s0037 Marchantia polymorpha HOM05D004815 ORTHO05D005742 9.2e-71 271.6 408 41.4
SMO147G0187 Selaginella moellendorffii HOM05D004815 ORTHO05D005742 3.8e-69 266.2 383 39.4
Dinv32412 Davidia involucrata HOM05D004815 ORTHO05D005742 4.3e-68 262.7 260 56.5
CSS0047010 Camellia sinensis var. sinensis HOM05D004815 ORTHO05D005742 1.2e-67 261.2 273 55.7
ATR0757G223 Amborella trichopoda HOM05D004815 ORTHO05D005742 1.5e-65 254.2 234 59.0
CSS0023679 Camellia sinensis var. sinensis HOM05D004815 ORTHO05D005742 2.2e-64 250.4 287 52.3
Eucgr.D02393 Eucalyptus grandis HOM05D004815 ORTHO05D005742 6.0e-62 242.3 242 55.8
AagrBONN_evm.TU.Sc2ySwM_228.5506 Anthoceros agrestis HOM05D004815 ORTHO05D005742 3.9e-61 239.6 392 37.8
Eucgr.D02410 Eucalyptus grandis HOM05D004815 ORTHO05D005742 2.0e-57 227.3 242 53.7
Gohir.A11G084200 Gossypium hirsutum HOM05D004815 ORTHO05D005742 9.2e-55 218.4 253 51.4
CDE11G0368 Ceratophyllum demersum HOM05D004815 ORTHO05D005742 2.5e-52 210.3 212 52.4
Pp3c20_6130 Physcomitrium patens HOM05D004815 ORTHO05D005742 3.3e-52 209.9 344 38.1
PGSC0003DMG400007146 Solanum tuberosum HOM05D004815 ORTHO05D005742 6.2e-51 205.7 261 43.7
ATR0757G181 Amborella trichopoda HOM05D004815 ORTHO05D005742 1.9e-44 184.1 152 62.5
AagrBONN_evm.TU.Sc2ySwM_369.172 Anthoceros agrestis HOM05D004815 ORTHO05D005742 3.3e-44 183.3 387 30.5
CDE11G0585 Ceratophyllum demersum HOM05D004815 ORTHO05D005742 1.6e-43 181.0 139 64.0
FAN10G0991 Fragaria x ananassa HOM05D004815 ORTHO05D005742 1.4e-42 177.9 115 70.4
Eucgr.D02397 Eucalyptus grandis HOM05D004815 ORTHO05D005742 6.8e-42 175.6 210 52.4
PRCOL_00005618 Prasinoderma coloniale HOM05D004815 ORTHO05D005742 4.8e-27 126.3 433 25.4
Aa31LG6G10720 Aethionema arabicum HOM05D004815 ORTHO05D005742 3.8e-24 116.7 142 50.7
Glyma.04G148600 Glycine max HOM05D004815 ORTHO05D005742 2.4e-23 114.0 72 76.4
CBR_g3181 Chara braunii HOM05D004815 ORTHO05D005742 3.5e-22 110.2 247 31.2
COL.COLO4_24134 Corchorus olitorius HOM05D000638 ORTHO05D000801 2.2e-16 90.9 73 67.1
Aa31sc1021G10 Aethionema arabicum HOM05D004815 ORTHO05D005742 1.4e-15 88.2 120 43.3
Lj3g0018651 Lotus japonicus HOM05D004815 ORTHO05D005742 3.9e-13 80.1 42 88.1
MBI11_g13051_MAGBIO Magnolia biondii HOM05D004815 ORTHO05D005742 9.6e-12 75.5 78 50.0
Hund16967 Selenicereus undatus HOM05D004815 ORTHO05D005742 8.4e-08 62.4 79 48.1


User provided reference genes

Program Settings