Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 1.1e-81 306.6 156 100.0
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 9.0e-60 233.8 156 77.6
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 2.6e-59 232.3 156 76.9
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 3.4e-59 231.9 156 75.0
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 5.8e-59 231.1 156 75.6
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 7.6e-59 230.7 156 75.6
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 9.9e-59 230.3 156 75.6
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 9.9e-59 230.3 156 75.6
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 3.8e-58 228.4 156 73.1
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 4.9e-58 228.0 157 75.8
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 1.1e-57 226.9 156 75.6
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 1.9e-57 226.1 156 75.6
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 2.4e-57 225.7 156 74.4
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 4.2e-57 224.9 156 73.7
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 5.4e-57 224.6 156 76.3
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 9.3e-57 223.8 156 75.0
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 2.1e-56 222.6 152 77.0
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 2.7e-56 222.2 161 72.7
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 4.6e-56 221.5 156 73.7
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 6.0e-56 221.1 156 73.1
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 7.9e-56 220.7 156 72.4
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 7.9e-56 220.7 158 73.4
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 3.0e-55 218.8 156 73.7
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 3.0e-55 218.8 154 74.0
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 3.0e-55 218.8 156 71.8
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 3.9e-55 218.4 156 72.4
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 3.9e-55 218.4 152 75.0
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 5.1e-55 218.0 156 70.5
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 5.1e-55 218.0 156 70.5
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 6.7e-55 217.6 157 72.0
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 1.1e-54 216.9 156 72.4
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 1.5e-54 216.5 144 80.6
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 2.5e-54 215.7 156 71.8
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 4.3e-54 214.9 156 71.2
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 5.6e-54 214.5 157 72.6
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 5.6e-54 214.5 150 74.0
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 9.6e-54 213.8 156 71.2
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 1.3e-53 213.4 124 85.5
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 1.6e-53 213.0 144 79.9
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 1.6e-53 213.0 156 71.2
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 2.1e-53 212.6 156 73.7
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 2.1e-53 212.6 156 73.1
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 2.1e-53 212.6 156 71.8
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 2.8e-53 212.2 118 89.0
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 3.7e-53 211.8 136 78.7
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 3.7e-53 211.8 156 75.0
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 3.7e-53 211.8 158 72.8
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 3.7e-53 211.8 156 70.5
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 6.2e-53 211.1 119 89.9
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 6.2e-53 211.1 156 74.4
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 8.1e-53 210.7 117 89.7
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 8.1e-53 210.7 156 73.7
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 1.1e-52 210.3 157 70.1
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 1.4e-52 209.9 159 71.1
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 1.4e-52 209.9 117 89.7
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 1.8e-52 209.5 156 73.1
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 1.8e-52 209.5 115 88.7
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.8e-52 209.5 156 72.4
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 2.4e-52 209.1 156 67.9
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.4e-52 209.1 154 73.4
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 2.4e-52 209.1 162 68.5
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 3.1e-52 208.8 158 72.8
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 3.1e-52 208.8 158 70.9
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 4.0e-52 208.4 115 87.8
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 4.0e-52 208.4 117 87.2
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 4.0e-52 208.4 156 68.6
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 9.0e-52 207.2 150 72.7
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.6e-51 205.7 154 72.1
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 2.6e-51 205.7 156 69.9
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 3.4e-51 205.3 114 93.0
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 3.4e-51 205.3 158 69.6
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 4.5e-51 204.9 148 73.6
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 5.8e-51 204.5 158 69.0
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 9.9e-51 203.8 157 68.8
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 9.9e-51 203.8 124 84.7
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 1.3e-50 203.4 158 71.5
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 1.7e-50 203.0 159 70.4
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 1.7e-50 203.0 160 71.2
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 2.9e-50 202.2 157 70.1
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 2.9e-50 202.2 125 79.2
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 3.8e-50 201.8 162 69.8
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 3.8e-50 201.8 124 80.6
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 3.8e-50 201.8 156 68.6
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 4.9e-50 201.4 127 82.7
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 6.4e-50 201.1 157 70.1
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 6.4e-50 201.1 116 87.9
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 6.4e-50 201.1 116 87.9
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.2e-48 196.8 157 72.0
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 2.7e-48 195.7 117 83.8
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 1.5e-43 179.9 126 73.0
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 2.0e-43 179.5 143 67.8
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 1.1e-41 173.7 127 68.5
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 1.1e-41 173.7 130 70.0
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 1.2e-40 170.2 156 59.6
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 1.6e-40 169.9 127 67.7
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 3.5e-40 168.7 127 71.7
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 1.3e-39 166.8 127 69.3
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 2.3e-39 166.0 138 63.0
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 3.3e-38 162.2 131 65.6
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 2.2e-37 159.5 129 64.3
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 2.8e-37 159.1 128 64.1
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 1.1e-36 157.1 148 59.5
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 1.4e-36 156.8 128 66.4
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 3.1e-36 155.6 137 57.7
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 4.1e-36 155.2 104 73.1
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 2.0e-35 152.9 89 85.4
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 2.1e-32 142.9 141 54.6
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 2.7e-32 142.5 95 72.6
CsaV3_5G027180 Cucumis sativus L. HOM05D007050 ORTHO05D008849 5.2e-15 85.1 103 51.5
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 2.4e-12 76.3 68 54.4
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 3.1e-12 75.9 120 40.8


User provided reference genes

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