Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00457 Aquilegia oxysepala HOM05D005596 ORTHO05D006994 2.5e-80 302.0 146 100.0
Psat6g200160 Pisum sativum HOM05D005596 ORTHO05D006994 5.3e-38 161.4 104 70.2
Dinv35175 Davidia involucrata HOM05D005596 ORTHO05D006994 6.9e-38 161.0 104 71.2
PSO478G4610 Papaver somniferum HOM05D005596 ORTHO05D006994 6.9e-38 161.0 134 60.4
PSO782G2992 Papaver somniferum HOM05D005596 ORTHO05D006994 6.9e-38 161.0 134 60.4
Glyma.10G239200 Glycine max HOM05D005596 ORTHO05D006994 9.0e-38 160.6 102 70.6
Medtr1g101540 Medicago truncatula HOM05D005596 ORTHO05D006994 9.0e-38 160.6 104 70.2
Manes.06G143300 Manihot esculenta HOM05D005596 ORTHO05D006994 1.2e-37 160.2 104 72.1
Cfa008275 Carpinus fangiana HOM05D005596 ORTHO05D006994 1.5e-37 159.8 109 68.8
Potri.012G133900 Populus trichocarpa HOM05D005596 ORTHO05D006994 1.5e-37 159.8 115 66.1
Sed0010012 Sechium edule HOM05D005596 ORTHO05D006994 1.5e-37 159.8 105 68.6
TPR.G17416 Trifolium pratense HOM05D005596 ORTHO05D006994 1.5e-37 159.8 108 66.7
Haze_13762 Corylus avellana HOM05D005596 ORTHO05D006994 2.0e-37 159.5 109 67.9
LjContig00238g0007789 Lotus japonicus HOM05D005596 ORTHO05D006994 3.4e-37 158.7 104 69.2
TWI39G0482 Tripterygium wilfordii HOM05D005596 ORTHO05D006994 3.4e-37 158.7 104 68.3
FAN03G2823 Fragaria x ananassa HOM05D005596 ORTHO05D006994 4.5e-37 158.3 105 68.6
Sabra12G0100700 Salix brachista HOM05D005596 ORTHO05D006994 4.5e-37 158.3 119 64.7
CDE11G1004 Ceratophyllum demersum HOM05D005596 ORTHO05D006994 7.7e-37 157.5 100 72.0
FAN10G2089 Fragaria x ananassa HOM05D005596 ORTHO05D006994 1.0e-36 157.1 105 68.6
FAN10G3222 Fragaria x ananassa HOM05D005596 ORTHO05D006994 1.0e-36 157.1 105 68.6
RcHm_v2.0_Chr1g0376671 Rosa chinensis HOM05D005596 ORTHO05D006994 1.0e-36 157.1 105 68.6
FAN06G1108 Fragaria x ananassa HOM05D005596 ORTHO05D006994 1.3e-36 156.8 105 68.6
FAN06G4254 Fragaria x ananassa HOM05D005596 ORTHO05D006994 1.3e-36 156.8 105 68.6
GSVIVG01010628001 Vitis vinifera HOM05D005596 ORTHO05D006994 1.7e-36 156.4 121 61.2
MELO3C006872.2 Cucumis melo HOM05D005596 ORTHO05D006994 2.2e-36 156.0 108 65.7
Lsat_1_v5_gn_8_7641 Lactuca sativa HOM05D005596 ORTHO05D006994 2.2e-36 156.0 120 60.8
Nn6g34264 Nelumbo nucifera HOM05D005596 ORTHO05D006994 2.2e-36 156.0 104 70.2
CANSAT21G1758 Cannabis sativa HOM05D005596 ORTHO05D006994 2.9e-36 155.6 104 69.2
Ca_10798_v3 Cicer arietinum L. HOM05D005596 ORTHO05D006994 2.9e-36 155.6 102 67.6
CsaV3_3G016780 Cucumis sativus L. HOM05D005596 ORTHO05D006994 5.0e-36 154.8 108 65.7
QL09p015809 Quercus lobata HOM05D005596 ORTHO05D006994 5.0e-36 154.8 109 65.1
TAR375G0353 Trochodendron aralioides HOM05D005596 ORTHO05D006994 6.5e-36 154.5 124 62.9
VMungo0720G0093 Vigna mungo HOM05D005596 ORTHO05D006994 1.1e-35 153.7 103 66.0
QL09p016062 Quercus lobata HOM05D005596 ORTHO05D006994 1.4e-35 153.3 109 64.2
CSS0004859 Camellia sinensis var. sinensis HOM05D005596 ORTHO05D006994 1.9e-35 152.9 102 72.5
Actinidia34077 Actinidia chinensis HOM05D005596 ORTHO05D006994 2.5e-35 152.5 104 67.3
CSS0017210 Camellia sinensis var. sinensis HOM05D005596 ORTHO05D006994 2.5e-35 152.5 102 72.5
MD01G1196400 Malus domestica HOM05D005596 ORTHO05D006994 2.5e-35 152.5 100 70.0
Thecc.03G170100 Theobroma cacao HOM05D005596 ORTHO05D006994 2.5e-35 152.5 104 66.3
Gohir.D09G040500 Gossypium hirsutum HOM05D005596 ORTHO05D006994 3.2e-35 152.1 108 64.8
Gorai.006G046300 Gossypium raimondii HOM05D005596 ORTHO05D006994 3.2e-35 152.1 108 64.8
HanXRQChr13g0405601 Helianthus annuus HOM05D005596 ORTHO05D006994 4.2e-35 151.8 119 60.5
Lalb_Chr06g0160971 Lupinus albus HOM05D005596 ORTHO05D006994 4.2e-35 151.8 100 68.0
Ciclev10005112m.g Citrus clementina HOM05D005596 ORTHO05D006994 5.5e-35 151.4 120 62.5
MBI12_g25031_MAGBIO Magnolia biondii HOM05D005596 ORTHO05D006994 5.5e-35 151.4 104 67.3
Cpa.g.sc107.2 Carica papaya HOM05D005596 ORTHO05D006994 4.6e-34 148.3 104 64.4
Cc02_g03410 Coffea canephora HOM05D005596 ORTHO05D006994 6.1e-34 147.9 101 67.3
Duzib205G1479 Durio zibethinus HOM05D005596 ORTHO05D006994 6.1e-34 147.9 101 66.3
Aa31LG3G8420 Aethionema arabicum HOM05D005596 ORTHO05D006994 7.9e-34 147.5 105 61.9
CiPaw.03G102200 Carya illinoinensis HOM05D005596 ORTHO05D006994 1.4e-33 146.7 104 64.4
DCAR_018164 Daucus carota HOM05D005596 ORTHO05D006994 2.3e-33 146.0 99 67.7
Eucgr.K00221 Eucalyptus grandis HOM05D005596 ORTHO05D006994 3.0e-33 145.6 99 65.7
PGR142G4172 Punica granatum HOM05D005596 ORTHO05D006994 3.0e-33 145.6 120 57.5
CARHR264960 Cardamine hirsuta HOM05D005596 ORTHO05D006994 5.1e-33 144.8 105 60.0
Sp6g14270 Schrenkiella parvula HOM05D005596 ORTHO05D006994 5.1e-33 144.8 107 57.9
vmacro06733 Vaccinium macrocarpon HOM05D005596 ORTHO05D006994 5.1e-33 144.8 106 64.2
vmacro06726 Vaccinium macrocarpon HOM05D005596 ORTHO05D006994 8.8e-33 144.1 106 64.2
Thhalv10013712m.g Eutrema salsugineum HOM05D005596 ORTHO05D006994 1.1e-32 143.7 105 57.1
Rhsim03G0176700 Rhododendron simsii HOM05D005596 ORTHO05D006994 1.5e-32 143.3 106 63.2
THA.LOC104811480 Tarenaya hassleriana HOM05D005596 ORTHO05D006994 1.9e-32 142.9 120 55.8
AL8G26370 Arabidopsis lyrata HOM05D005596 ORTHO05D006994 2.5e-32 142.5 103 60.2
Ah.07g208910 Amaranthus hybridus HOM05D005596 ORTHO05D006994 4.3e-32 141.7 105 62.9
BcaB05g23951 Brassica carinata HOM05D005596 ORTHO05D006994 4.3e-32 141.7 106 56.6
Carub.0008s1212 Capsella rubella HOM05D005596 ORTHO05D006994 4.3e-32 141.7 104 58.7
Migut.F00380 Erythranthe guttata HOM05D005596 ORTHO05D006994 4.3e-32 141.7 105 65.7
PGSC0003DMG400014264 Solanum tuberosum HOM05D005596 ORTHO05D006994 4.3e-32 141.7 100 63.0
BraA02t06264Z Brassica rapa HOM05D005596 ORTHO05D006994 9.7e-32 140.6 107 56.1
AUR62016035 Chenopodium quinoa HOM05D005596 ORTHO05D006994 9.7e-32 140.6 100 65.0
Oeu022544.2 Olea europaea HOM05D005596 ORTHO05D006994 2.8e-31 139.0 111 57.7
BcaC03g14556 Brassica carinata HOM05D005596 ORTHO05D006994 3.7e-31 138.7 103 56.3
AUR62021241 Chenopodium quinoa HOM05D005596 ORTHO05D006994 3.7e-31 138.7 100 64.0
ClCG05G007790 Citrullus lanatus HOM05D005596 ORTHO05D006994 4.8e-31 138.3 99 62.6
Eucgr.K00218 Eucalyptus grandis HOM05D005596 ORTHO05D006994 4.8e-31 138.3 104 60.6
HPP92_020337 Vanilla planifolia HOM05D005596 ORTHO05D006994 6.3e-31 137.9 100 63.0
MSTRG.8768 Avicennia marina HOM05D005596 ORTHO05D006994 8.2e-31 137.5 114 56.1
AL960U10010 Arabidopsis lyrata HOM05D005596 ORTHO05D006994 1.1e-30 137.1 101 58.4
BolC2t08136H Brassica oleracea HOM05D005596 ORTHO05D006994 1.1e-30 137.1 103 56.3
Peaxi162Scf00648g00016 Petunia axillaris HOM05D005596 ORTHO05D006994 1.1e-30 137.1 101 58.4
Solyc03g026260.3 Solanum lycopersicum HOM05D005596 ORTHO05D006994 3.1e-30 135.6 98 62.2
Atru.chr1.530 Acer truncatum HOM05D005596 ORTHO05D006994 4.1e-30 135.2 100 59.0
A02p12010 Brassica napus HOM05D005596 ORTHO05D006994 4.1e-30 135.2 103 56.3
C02p20060 Brassica napus HOM05D005596 ORTHO05D006994 5.3e-30 134.8 103 55.3
SalBow4G2853 Salvia bowleyana HOM05D005596 ORTHO05D006994 1.5e-29 133.3 99 61.6
CAN.G548.12 Capsicum annuum HOM05D005596 ORTHO05D006994 3.4e-29 132.1 101 59.4
unitig_0.g2489 Utricularia gibba HOM05D005596 ORTHO05D006994 4.5e-29 131.7 106 56.6
arahy.Tifrunner.gnm1.ann1.8H8JUA Arachis hypogaea HOM05D005596 ORTHO05D006994 1.7e-28 129.8 86 67.4
arahy.Tifrunner.gnm1.ann1.EY18QM Arachis hypogaea HOM05D005596 ORTHO05D006994 5.0e-28 128.3 86 67.4
Nitab4.5_0001083g0020 Nicotiana tabacum HOM05D005596 ORTHO05D006994 4.2e-27 125.2 112 51.8
Nitab4.5_0002394g0030 Nicotiana tabacum HOM05D005596 ORTHO05D006994 5.5e-27 124.8 91 58.2
FAN03G1867 Fragaria x ananassa HOM05D005596 ORTHO05D006994 7.2e-27 124.4 88 62.5
Hund04701 Selenicereus undatus HOM05D005596 ORTHO05D006994 5.1e-25 118.2 98 55.1
Zm00001eb037540 Zea mays HOM05D005596 ORTHO05D006994 1.3e-23 113.6 100 52.0
ATR0757G105 Amborella trichopoda HOM05D005596 ORTHO05D006994 3.2e-19 99.0 107 48.6
Pp3c25_14680 Physcomitrium patens HOM05D005596 ORTHO05D006994 7.2e-19 97.8 100 47.0
CBR_g7940 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-18 97.1 98 49.0
AagrBONN_evm.TU.Sc2ySwM_344.2862 Anthoceros agrestis HOM05D005596 ORTHO05D006994 2.1e-18 96.3 102 45.1
Mapoly0043s0066 Marchantia polymorpha HOM05D005596 ORTHO05D006994 1.8e-17 93.2 98 45.9
ECA233G5181 Erigeron canadensis HOM05D005596 ORTHO05D006994 8.8e-17 90.9 67 59.7
Cre16.g677800 Chlamydomonas reinhardtii HOM05D005596 ORTHO05D006994 1.1e-16 90.5 98 40.8
SMO367G0553 Selaginella moellendorffii HOM05D005596 ORTHO05D006994 2.2e-15 86.3 99 42.4
SMO343G0141 Selaginella moellendorffii HOM05D005596 ORTHO05D006994 1.4e-09 67.0 72 45.8


User provided reference genes

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