Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 4.0e-72 274.6 136 100.0
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 2.0e-47 192.6 135 68.1
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 5.8e-47 191.0 133 71.4
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 2.9e-46 188.7 136 69.9
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 6.4e-46 187.6 136 66.2
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 2.4e-45 185.7 136 69.1
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 4.2e-45 184.9 118 73.7
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 9.3e-45 183.7 138 66.7
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 9.3e-45 183.7 134 64.9
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 1.2e-44 183.3 137 66.4
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 6.0e-44 181.0 126 69.0
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 7.9e-44 180.6 119 71.4
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 1.3e-43 179.9 139 65.5
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 1.8e-43 179.5 118 72.9
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 1.8e-43 179.5 125 69.6
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 1.8e-43 179.5 127 67.7
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 5.1e-43 177.9 127 67.7
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 6.7e-43 177.6 127 67.7
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.1e-42 176.8 119 71.4
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 1.5e-42 176.4 130 66.2
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 1.5e-42 176.4 137 62.8
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 1.5e-42 176.4 132 68.2
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 1.9e-42 176.0 137 65.0
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 1.9e-42 176.0 133 62.4
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 3.3e-42 175.3 134 64.9
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 3.3e-42 175.3 138 65.2
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 5.6e-42 174.5 149 57.7
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 7.4e-42 174.1 128 67.2
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 9.6e-42 173.7 136 63.2
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 9.6e-42 173.7 133 64.7
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 9.6e-42 173.7 135 65.2
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 1.3e-41 173.3 145 59.3
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 1.3e-41 173.3 127 66.1
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.6e-41 172.9 133 64.7
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 1.6e-41 172.9 133 64.7
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 2.1e-41 172.6 162 56.8
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 2.8e-41 172.2 133 63.2
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 4.8e-41 171.4 120 66.7
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 4.8e-41 171.4 121 70.2
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 4.8e-41 171.4 119 70.6
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 6.2e-41 171.0 141 61.7
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 1.1e-40 170.2 118 69.5
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 1.1e-40 170.2 140 62.9
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 1.4e-40 169.9 142 59.2
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 2.4e-40 169.1 121 69.4
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 4.0e-40 168.3 118 66.1
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 4.0e-40 168.3 117 68.4
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 9.0e-40 167.2 136 61.0
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 9.0e-40 167.2 117 65.0
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 2.0e-39 166.0 141 63.1
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.6e-39 165.6 127 66.1
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 2.6e-39 165.6 120 66.7
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 4.5e-39 164.9 118 67.8
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 4.5e-39 164.9 117 65.8
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 5.8e-39 164.5 128 60.9
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.6e-39 164.1 127 65.4
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 1.7e-38 162.9 129 59.7
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 1.7e-38 162.9 117 65.0
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.9e-38 162.2 119 68.9
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.8e-38 161.8 127 64.6
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.9e-38 161.4 127 63.8
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 4.9e-38 161.4 119 68.9
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 6.4e-38 161.0 127 64.6
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 6.4e-38 161.0 119 68.1
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 8.4e-38 160.6 121 63.6
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 1.4e-37 159.8 127 60.6
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 1.4e-37 159.8 140 54.3
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 1.9e-37 159.5 131 60.3
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 2.4e-37 159.1 127 65.4
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 2.4e-37 159.1 125 64.0
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 3.2e-37 158.7 133 60.9
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 4.2e-37 158.3 127 60.6
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 5.5e-37 157.9 139 59.7
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 2.1e-36 156.0 119 63.0
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 2.7e-36 155.6 121 60.3
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 2.7e-36 155.6 127 59.1
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 7.9e-36 154.1 128 60.2
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 1.3e-35 153.3 127 59.1
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 2.3e-35 152.5 132 57.6
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 8.7e-35 150.6 119 60.5
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 8.7e-35 150.6 127 61.4
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 8.7e-35 150.6 127 58.3
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 8.7e-35 150.6 128 59.4
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 1.1e-34 150.2 132 55.3
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 1.1e-34 150.2 131 55.0
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 5.6e-34 147.9 127 59.8
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 2.8e-33 145.6 127 55.1
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 6.2e-33 144.4 150 50.7
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 8.2e-33 144.1 119 61.3
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 8.2e-33 144.1 122 59.8
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 1.8e-32 142.9 119 60.5
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 2.4e-32 142.5 119 60.5
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 2.4e-32 142.5 124 56.5
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 2.4e-32 142.5 123 56.1
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 2.4e-32 142.5 124 56.5
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 5.3e-32 141.4 119 58.0
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 9.0e-32 140.6 124 55.6
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 9.0e-32 140.6 123 55.3
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 1.2e-31 140.2 119 58.0
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 1.2e-31 140.2 119 59.7
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 7.6e-31 137.5 119 55.5
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 1.6e-28 129.8 134 50.0
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 1.0e-27 127.1 137 48.2
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 1.3e-27 126.7 125 53.6
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 8.7e-27 124.0 117 53.8
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 5.7e-26 121.3 70 74.3
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 9.7e-26 120.6 136 47.1
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 4.8e-25 118.2 85 65.9
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 3.1e-16 89.0 50 76.0
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 4.5e-15 85.1 85 55.3
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 5.9e-15 84.7 143 36.4
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 2.9e-14 82.4 82 54.9
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 5.0e-14 81.6 106 43.4
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 2.7e-12 75.9 50 68.0
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 4.7e-12 75.1 111 39.6


User provided reference genes

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