Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00310 Aquilegia oxysepala HOM05D008240 ORTHO05D010333 2.9e-38 161.4 80 100.0
COL.COLO4_03572 Corchorus olitorius HOM05D008240 ORTHO05D010333 1.6e-12 75.9 56 64.3
COL.COLO4_28004 Corchorus olitorius HOM05D008240 ORTHO05D010333 1.6e-12 75.9 56 64.3
BolC8t50025H Brassica oleracea HOM05D008240 ORTHO05D010333 2.7e-12 75.1 48 75.0
Cpa.g.sc107.72 Carica papaya HOM05D008240 ORTHO05D010333 3.6e-12 74.7 60 61.7
Manes.14G024900 Manihot esculenta HOM05D008240 ORTHO05D010333 1.0e-11 73.2 58 58.6
Thecc.03G179600 Theobroma cacao HOM05D008240 ORTHO05D010333 1.0e-11 73.2 56 62.5
Hma1.2p1_0227F.1_g095850 Hydrangea macrophylla HOM05D008240 ORTHO05D010333 1.4e-11 72.8 47 68.1
Manes.06G149600 Manihot esculenta HOM05D008240 ORTHO05D010333 1.8e-11 72.4 47 66.0
Gorai.008G276000 Gossypium raimondii HOM05D008240 ORTHO05D010333 2.3e-11 72.0 54 59.3
Nn6g33426 Nelumbo nucifera HOM05D008240 ORTHO05D010333 3.0e-11 71.6 77 50.6
BraA06t24953Z Brassica rapa HOM05D008240 ORTHO05D010333 4.0e-11 71.2 48 68.8
arahy.Tifrunner.gnm1.ann1.MUHC0Z Arachis hypogaea HOM05D002671 ORTHO05D010333 5.2e-11 70.9 56 60.7
EL10Ac3g05605 Beta vulgaris HOM05D008240 ORTHO05D010333 5.2e-11 70.9 48 66.7
EL10Ac3g05606 Beta vulgaris HOM05D008240 ORTHO05D010333 5.2e-11 70.9 48 66.7
Gohir.D12G257700 Gossypium hirsutum HOM05D008240 ORTHO05D010333 5.2e-11 70.9 54 59.3
Medtr1g100890 Medicago truncatula HOM05D008240 ORTHO05D010333 5.2e-11 70.9 56 62.5
Prupe.2G297100 Prunus persica HOM05D008240 ORTHO05D010333 5.2e-11 70.9 55 61.8
Sc13g0008860 Simmondsia chinensis HOM05D008240 ORTHO05D010333 5.2e-11 70.9 60 58.3
Haze_00010 Corylus avellana HOM05D008240 ORTHO05D010333 6.7e-11 70.5 49 63.3
Dinv28418 Davidia involucrata HOM05D008240 ORTHO05D002863 6.7e-11 70.5 62 56.5
Lalb_Chr21g0305111 Lupinus albus HOM05D008240 ORTHO05D010333 6.7e-11 70.5 49 63.3
Potri.001G178400 Populus trichocarpa HOM05D008240 ORTHO05D010333 6.7e-11 70.5 60 53.3
Ciclev10006392m.g Citrus clementina HOM05D008240 ORTHO05D010333 1.1e-10 69.7 63 57.1
Actinidia34129 Actinidia chinensis HOM05D000206 ORTHO05D002863 1.5e-10 69.3 58 60.3
Carub.0005s1524 Capsella rubella HOM05D008240 ORTHO05D010333 1.5e-10 69.3 46 69.6
vmacro06659 Vaccinium macrocarpon HOM05D000206 ORTHO05D002863 1.5e-10 69.3 57 57.9
AUR62021162 Chenopodium quinoa HOM05D008240 ORTHO05D010333 2.0e-10 68.9 43 67.4
Gohir.A12G256400 Gossypium hirsutum HOM05D008240 ORTHO05D010333 2.0e-10 68.9 52 59.6
A06p18700 Brassica napus HOM05D002671 ORTHO05D010333 2.6e-10 68.6 48 68.8
Atru.chr1.425 Acer truncatum HOM05D008240 ORTHO05D010333 3.3e-10 68.2 50 60.0
CARHR157860 Cardamine hirsuta HOM05D008240 ORTHO05D010333 3.3e-10 68.2 43 72.1
FvH4_7g29780 Fragaria vesca HOM05D008240 ORTHO05D010333 3.3e-10 68.2 49 61.2
Oeu045392.1 Olea europaea HOM05D008240 ORTHO05D010333 3.3e-10 68.2 43 67.4
Phvul.011G006600 Phaseolus vulgaris HOM05D008240 ORTHO05D010333 3.3e-10 68.2 44 68.2
arahy.Tifrunner.gnm1.ann1.ES0TVM Arachis hypogaea HOM05D008240 ORTHO05D010333 4.4e-10 67.8 56 58.9
Glyma.12G005800 Glycine max HOM05D008240 ORTHO05D010333 4.4e-10 67.8 44 65.9
Psat6g197280 Pisum sativum HOM05D008240 ORTHO05D010333 4.4e-10 67.8 54 61.1
RcHm_v2.0_Chr1g0377781 Rosa chinensis HOM05D008240 ORTHO05D010333 4.4e-10 67.8 45 64.4
CSS0023725 Camellia sinensis var. sinensis HOM05D008240 ORTHO05D010333 7.5e-10 67.0 48 64.6
VMungo1127G0785 Vigna mungo HOM05D008240 ORTHO05D010333 7.5e-10 67.0 44 68.2
CiPaw.06G002300 Carya illinoinensis HOM05D008240 ORTHO05D010333 1.3e-09 66.2 63 52.4
TPR.G27012 Trifolium pratense HOM05D008240 ORTHO05D010333 2.2e-09 65.5 68 52.9
Sabra01G0148200 Salix brachista HOM05D008240 ORTHO05D010333 3.7e-09 64.7 57 54.4
ClCG10G005770 Citrullus lanatus HOM05D008240 ORTHO05D010333 8.2e-09 63.5 43 58.1
Lsat_1_v5_gn_9_55121 Lactuca sativa HOM05D008240 ORTHO05D010333 8.2e-09 63.5 43 62.8
Glyma.09G230900 Glycine max HOM05D008240 ORTHO05D010333 1.1e-08 63.2 40 65.0
DCAR_020258 Daucus carota HOM05D008240 ORTHO05D010333 1.4e-08 62.8 42 64.3
MELO3C025428.2 Cucumis melo HOM05D008240 ORTHO05D010333 3.1e-08 61.6 55 50.9
Migut.F01103 Erythranthe guttata HOM05D008240 ORTHO05D010333 4.1e-08 61.2 50 56.0
Os07g0175200 Oryza sativa ssp. japonica HOM05D008240 ORTHO05D010333 9.1e-08 60.1 47 57.4
GSVIVG01028913001 Vitis vinifera HOM05D008240 ORTHO05D010333 1.2e-07 59.7 51 54.9
Sed0005066 Sechium edule HOM05D008240 ORTHO05D010333 1.6e-07 59.3 53 49.1
CsaV3_3G005460 Cucumis sativus L. HOM05D008240 ORTHO05D010333 2.0e-07 58.9 40 60.0
CAN.G1175.10 Capsicum annuum HOM05D008240 ORTHO05D010333 3.5e-07 58.2 56 50.0
Peaxi162Scf00444g00412 Petunia axillaris HOM05D008240 ORTHO05D010333 1.7e-06 55.8 60 50.0
Solyc03g025480.4 Solanum lycopersicum HOM05D008240 ORTHO05D010333 2.9e-06 55.1 64 43.8
Sopen03g004320 Solanum pennellii HOM05D008240 ORTHO05D010333 2.9e-06 55.1 64 43.8
PGSC0003DMG400015797 Solanum tuberosum HOM05D008240 ORTHO05D010333 5.0e-06 54.3 59 54.2


User provided reference genes

Program Settings