Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 0.0e+00 1386.3 705 100.0
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.9e-194 683.3 732 53.4
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 9.0e-192 674.5 735 54.0
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 5.7e-178 628.6 726 51.1
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 7.6e-175 618.2 660 53.6
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 1.3e-174 617.5 717 50.9
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 7.9e-172 608.2 735 50.7
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.1e-170 604.4 787 47.8
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.6e-169 600.5 798 46.2
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 4.5e-167 592.4 744 48.0
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 4.5e-167 592.4 727 50.2
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 5.9e-167 592.0 726 48.9
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 1.8e-160 570.5 721 48.8
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 5.9e-159 565.5 734 48.8
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 1.0e-158 564.7 736 48.2
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 1.3e-158 564.3 732 47.4
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 1.7e-158 563.9 733 48.6
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.8e-155 553.9 731 47.6
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 3.9e-155 552.7 714 48.6
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 6.7e-155 552.0 718 48.2
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 4.4e-154 549.3 711 47.4
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 2.8e-153 546.6 737 47.4
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 6.3e-153 545.4 725 48.6
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.1e-152 544.7 695 47.9
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 2.6e-151 540.0 724 48.2
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 3.5e-151 539.7 733 47.3
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 4.5e-151 539.3 732 47.7
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 2.2e-150 537.0 691 47.5
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 3.8e-150 536.2 726 47.4
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 5.0e-150 535.8 707 47.0
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 3.6e-148 529.6 726 47.1
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 3.6e-148 529.6 722 47.4
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.7e-148 529.3 714 47.2
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 8.0e-148 528.5 716 48.2
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 8.0e-148 528.5 696 47.1
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.8e-147 527.3 732 46.3
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 3.0e-147 526.6 718 46.1
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 9.7e-146 521.5 690 46.4
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 4.8e-145 519.2 730 46.0
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.8e-145 519.2 693 46.6
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 1.1e-144 518.1 730 45.9
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 1.4e-144 517.7 706 46.7
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 4.1e-144 516.2 700 45.6
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 5.3e-144 515.8 724 48.2
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 4.5e-143 512.7 716 46.9
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 1.5e-141 507.7 712 46.9
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 6.1e-140 502.3 728 44.9
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 1.4e-139 501.1 719 46.3
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 6.8e-139 498.8 699 45.9
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 1.5e-138 497.7 716 45.4
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 2.0e-138 497.3 720 46.7
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 7.5e-138 495.4 737 44.6
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 9.8e-138 495.0 699 45.9
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 4.1e-136 489.6 699 44.9
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 7.0e-136 488.8 708 44.2
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 5.0e-134 482.6 719 44.5
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 1.1e-133 481.5 756 42.5
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 1.9e-133 480.7 782 42.7
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 2.5e-133 480.3 735 44.2
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 9.5e-133 478.4 699 45.2
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 3.6e-132 476.5 702 43.3
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 4.7e-132 476.1 711 43.7
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 8.0e-132 475.3 718 43.3
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 2.3e-131 473.8 523 52.0
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 2.3e-131 473.8 699 43.9
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 2.0e-130 470.7 696 44.5
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 3.4e-130 469.9 792 43.3
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 5.7e-130 469.2 696 45.0
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 2.8e-129 466.8 730 43.3
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 4.9e-129 466.1 700 43.4
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 6.3e-129 465.7 714 42.6
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 8.3e-129 465.3 651 46.9
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 8.3e-129 465.3 602 48.5
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 5.4e-128 462.6 732 42.9
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 1.2e-127 461.5 718 44.7
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.2e-127 461.5 731 43.9
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 3.5e-127 459.9 701 44.2
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 4.5e-127 459.5 663 45.1
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.5e-127 459.5 721 45.2
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 1.7e-126 457.6 701 44.1
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 2.3e-126 457.2 714 42.0
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 2.9e-126 456.8 712 40.9
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 8.6e-126 455.3 721 44.7
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 7.3e-125 452.2 708 45.2
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 6.1e-124 449.1 730 43.4
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 8.0e-124 448.7 694 43.1
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.8e-123 447.6 714 44.0
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 2.3e-123 447.2 710 41.4
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 1.3e-121 441.4 627 43.5
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.3e-121 441.4 645 45.1
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 2.9e-121 440.3 846 39.2
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 3.2e-120 436.8 697 42.3
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.6e-119 434.5 705 41.7
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 5.0e-118 429.5 899 37.2
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 1.1e-117 428.3 681 41.9
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 1.9e-117 427.6 784 39.3
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 4.3e-117 426.4 682 43.0
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 8.9e-115 418.7 684 39.8
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 2.6e-114 417.2 726 41.0
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 4.9e-113 412.9 725 38.8
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 5.4e-112 409.5 665 41.4
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 7.0e-112 409.1 650 40.9
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.0e-110 405.2 581 46.1
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.3e-110 404.8 791 36.2
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 8.6e-110 402.1 710 40.0
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 5.6e-109 399.4 665 40.5
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 5.6e-109 399.4 744 41.5
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 1.2e-108 398.3 674 43.2
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.6e-108 397.9 593 44.9
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 4.7e-108 396.4 668 41.5
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 2.3e-107 394.0 628 41.6
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 1.5e-106 391.3 665 39.8
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 3.2e-104 383.6 665 39.4
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 5.4e-104 382.9 343 62.7
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 7.1e-104 382.5 795 37.4
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 1.6e-103 381.3 583 44.4
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 6.0e-103 379.4 698 39.3
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 3.0e-102 377.1 307 64.5
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 8.6e-102 375.6 720 39.4
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 1.9e-101 374.4 677 38.8
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 2.5e-101 374.0 673 38.8
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 4.3e-101 373.2 672 38.8
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 9.5e-101 372.1 663 38.6
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 1.1e-99 368.6 728 38.9
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 5.2e-99 366.3 672 39.6
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 2.0e-98 364.4 713 37.6
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 5.8e-98 362.8 664 39.2
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 8.4e-97 359.0 670 37.8
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 1.1e-96 358.6 670 39.3
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 1.1e-96 358.6 667 38.8
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 1.1e-96 358.6 665 38.3
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 3.2e-96 357.1 664 38.6
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 3.2e-96 357.1 713 35.9
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 6.6e-94 349.4 752 37.5
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 6.2e-92 342.8 665 37.1
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 6.9e-91 339.3 337 53.1
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 2.0e-90 337.8 666 37.2
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 9.9e-90 335.5 569 39.9
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 6.0e-87 326.2 561 39.6
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 6.6e-86 322.8 577 38.8
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 3.1e-83 313.9 708 36.4
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 5.3e-83 313.2 307 57.0
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 2.4e-80 304.3 627 36.7
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 1.0e-78 298.9 370 47.8
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 1.8e-78 298.1 284 55.3
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 6.7e-78 296.2 357 47.9
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 2.8e-76 290.8 351 51.6
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 2.0e-74 284.6 391 45.3
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.5e-74 283.5 725 34.2
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 2.1e-68 264.6 324 46.6
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 3.4e-66 257.3 300 46.0
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 3.4e-66 257.3 662 31.0
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.1e-51 209.1 142 72.5
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.1e-51 209.1 146 71.2
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 1.1e-45 189.1 741 30.4
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 3.3e-45 187.6 203 53.2
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 2.8e-44 184.5 449 36.7
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 2.9e-41 174.5 509 32.6
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 4.7e-39 167.2 292 39.4
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.0e-38 166.0 455 33.2
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 1.8e-38 165.2 187 49.7
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 2.4e-35 154.8 241 39.8
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 1.9e-32 145.2 381 31.2
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 1.9e-32 145.2 207 42.5
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 2.4e-27 128.3 145 53.8
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 6.8e-22 110.2 138 52.9
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 4.8e-20 104.0 457 30.4
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 7.0e-19 100.1 67 71.6
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 1.6e-15 89.0 435 27.6
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.5e-13 82.4 56 69.6
TAR375G0736 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.0e-13 82.0 113 46.0
Rhsim05G0045800 Rhododendron simsii HOM05D003626 ORTHO05D004255 3.7e-12 77.8 375 28.3
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 5.4e-11 73.9 74 50.0
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 4.5e-10 70.9 182 34.1
HPP92_028446 Vanilla planifolia HOM05D003626 ORTHO05D004255 7.8e-10 70.1 116 35.3
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis HOM05D003626 ORTHO05D004255 1.0e-09 69.7 154 32.5
HPP92_001484 Vanilla planifolia HOM05D003626 ORTHO05D004255 3.8e-09 67.8 76 46.1
Oeu035062.1 Olea europaea HOM05D003626 ORTHO05D004255 1.2e-07 62.8 186 33.9
HPP92_001477 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.2e-07 62.8 50 54.0
HPP92_027487 Vanilla planifolia HOM05D003626 ORTHO05D004255 8.0e-07 60.1 56 60.7
CBR_g49744 Chara braunii HOM05D000019 ORTHO05D000002 4.0e-06 57.8 65 47.7


User provided reference genes

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