Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00260 Aquilegia oxysepala HOM05D004502 ORTHO05D005579 0.0e+00 1729.5 855 100.0
TAR629G1389 Trochodendron aralioides HOM05D004502 ORTHO05D005579 1.1e-279 966.8 865 58.8
Nn1g01586 Nelumbo nucifera HOM05D004502 ORTHO05D005579 1.9e-273 946.0 860 57.6
Dinv32500 Davidia involucrata HOM05D004502 ORTHO05D005579 3.8e-269 931.8 869 56.3
CiPaw.01G063800 Carya illinoinensis HOM05D004502 ORTHO05D005579 1.4e-263 913.3 833 56.4
QL04p054124 Quercus lobata HOM05D004502 ORTHO05D005579 7.7e-262 907.5 816 56.4
Haze_15535 Corylus avellana HOM05D004502 ORTHO05D005579 8.5e-261 904.0 843 55.0
Cfa003897 Carpinus fangiana HOM05D004502 ORTHO05D005579 1.8e-258 896.3 807 56.3
GSVIVG01027000001 Vitis vinifera HOM05D004502 ORTHO05D005579 2.0e-257 892.9 852 55.3
Cpa.g.sc11.33 Carica papaya HOM05D004502 ORTHO05D005579 7.4e-257 891.0 821 54.4
Ciclev10018851m.g Citrus clementina HOM05D004502 ORTHO05D005579 6.3e-256 887.9 850 54.0
Potri.014G087300 Populus trichocarpa HOM05D004502 ORTHO05D005579 1.1e-255 887.1 842 55.5
Atru.chr5.526 Acer truncatum HOM05D004502 ORTHO05D005579 1.4e-255 886.7 821 54.3
Cc02_g38300 Coffea canephora HOM05D004502 ORTHO05D005579 1.5e-254 883.2 819 54.7
Hma1.2p1_0071F.1_g037745 Hydrangea macrophylla HOM05D004502 ORTHO05D005579 3.4e-254 882.1 865 54.6
Actinidia20888 Actinidia chinensis HOM05D004502 ORTHO05D005579 1.3e-253 880.2 824 55.5
Actinidia14191 Actinidia chinensis HOM05D004502 ORTHO05D005579 2.2e-253 879.4 870 53.1
Thecc.01G356300 Theobroma cacao HOM05D004502 ORTHO05D005579 8.5e-253 877.5 796 56.2
PGR042G2088 Punica granatum HOM05D004502 ORTHO05D005579 1.6e-251 873.2 848 54.5
Gorai.004G159100 Gossypium raimondii HOM05D004502 ORTHO05D005579 1.8e-250 869.8 849 53.9
Rhsim07G0013000 Rhododendron simsii HOM05D004502 ORTHO05D005579 1.8e-250 869.8 860 53.4
Duzib133G0971 Durio zibethinus HOM05D004502 ORTHO05D005579 3.0e-250 869.0 862 53.6
Medtr8g028875 Medicago truncatula HOM05D004502 ORTHO05D005579 3.0e-250 869.0 815 55.3
Glyma.07G068700 Glycine max HOM05D004502 ORTHO05D005579 5.7e-249 864.8 856 53.9
TWI23G1305 Tripterygium wilfordii HOM05D004502 ORTHO05D005579 2.8e-248 862.4 840 54.2
Lj3g0021790 Lotus japonicus HOM05D004502 ORTHO05D005579 8.2e-248 860.9 853 54.2
Eucgr.E00113 Eucalyptus grandis HOM05D004502 ORTHO05D005579 3.1e-247 859.0 850 53.4
Glyma.09G257000 Glycine max HOM05D004502 ORTHO05D005579 7.0e-247 857.8 845 53.4
Nn6g33342 Nelumbo nucifera HOM05D004502 ORTHO05D005579 2.6e-246 855.9 799 56.2
Glyma.18G235400 Glycine max HOM05D004502 ORTHO05D005579 7.7e-246 854.4 845 53.3
Gorai.007G101400 Gossypium raimondii HOM05D004502 ORTHO05D005579 1.0e-245 854.0 852 53.2
Gohir.D11G095000 Gossypium hirsutum HOM05D004502 ORTHO05D005579 2.9e-245 852.4 852 53.2
MD07G1133800 Malus domestica HOM05D004502 ORTHO05D005579 6.5e-245 851.3 855 52.2
Phvul.010G100800 Phaseolus vulgaris HOM05D004502 ORTHO05D005579 2.5e-244 849.4 850 53.3
Duzib138G1080 Durio zibethinus HOM05D004502 ORTHO05D005579 9.4e-244 847.4 772 56.6
CANSAT56G0477 Cannabis sativa HOM05D004502 ORTHO05D005579 1.2e-243 847.0 750 56.9
FvH4_7g14850 Fragaria vesca HOM05D004502 ORTHO05D005579 2.7e-243 845.9 834 52.2
RcHm_v2.0_Chr1g0356801 Rosa chinensis HOM05D004502 ORTHO05D005579 3.6e-243 845.5 870 51.4
Hund16660 Selenicereus undatus HOM05D004502 ORTHO05D005579 3.6e-243 845.5 873 52.0
HanXRQChr17g0562371 Helianthus annuus HOM05D004502 ORTHO05D005579 1.8e-242 843.2 822 53.0
Solyc01g094860.4 Solanum lycopersicum HOM05D004502 ORTHO05D005579 2.3e-242 842.8 809 52.9
CSS0020518 Camellia sinensis var. sinensis HOM05D004502 ORTHO05D005579 3.9e-242 842.0 799 54.7
VMungo0331G1775 Vigna mungo HOM05D004502 ORTHO05D005579 3.3e-241 839.0 859 52.0
Sabra14G0063300 Salix brachista HOM05D004502 ORTHO05D005579 5.7e-241 838.2 838 52.3
Sopen01g038640 Solanum pennellii HOM05D004502 ORTHO05D005579 7.4e-241 837.8 809 52.7
Peaxi162Scf00020g01028 Petunia axillaris HOM05D004502 ORTHO05D005579 9.7e-241 837.4 849 51.8
Sed0014632 Sechium edule HOM05D004502 ORTHO05D005579 1.3e-240 837.0 827 52.6
Migut.B01778 Erythranthe guttata HOM05D004502 ORTHO05D005579 2.2e-240 836.3 844 53.3
Lj9C585G14 Lonicera japonica HOM05D004502 ORTHO05D005579 2.8e-240 835.9 830 52.7
VMungo1383G3442 Vigna mungo HOM05D004502 ORTHO05D005579 4.8e-240 835.1 845 52.8
TPR.G37813 Trifolium pratense HOM05D004502 ORTHO05D005579 4.1e-239 832.0 829 52.5
CAN.G78.100 Capsicum annuum HOM05D004502 ORTHO05D005579 7.0e-239 831.2 825 52.4
Lalb_Chr17g0339421 Lupinus albus HOM05D004502 ORTHO05D005579 9.1e-239 830.9 858 52.3
Manes.01G254800 Manihot esculenta HOM05D004502 ORTHO05D005579 2.6e-238 829.3 773 54.6
HanXRQChr06g0170231 Helianthus annuus HOM05D004502 ORTHO05D005579 4.5e-238 828.6 847 51.2
PSO478G3176 Papaver somniferum HOM05D004502 ORTHO05D005579 4.5e-238 828.6 839 51.6
Sed0001889 Sechium edule HOM05D004502 ORTHO05D005579 7.7e-238 827.8 856 51.9
Lsat_1_v5_gn_4_34660 Lactuca sativa HOM05D004502 ORTHO05D005579 2.2e-237 826.2 815 51.9
ECA234G4483 Erigeron canadensis HOM05D004502 ORTHO05D005579 8.5e-237 824.3 820 51.7
Sc01g0003530 Simmondsia chinensis HOM05D004502 ORTHO05D005579 3.2e-236 822.4 786 53.8
THA.LOC104802040 Tarenaya hassleriana HOM05D004502 ORTHO05D005579 4.2e-236 822.0 846 51.3
CsaV3_6G000710 Cucumis sativus L. HOM05D004502 ORTHO05D005579 4.7e-235 818.5 863 50.9
Gohir.A11G090500 Gossypium hirsutum HOM05D004502 ORTHO05D005579 2.3e-234 816.2 780 54.7
Oeu052960.2 Olea europaea HOM05D004502 ORTHO05D005579 2.3e-234 816.2 840 51.8
arahy.Tifrunner.gnm1.ann1.C1BLFK Arachis hypogaea HOM05D004502 ORTHO05D005579 4.0e-234 815.5 854 51.5
AUR62004387 Chenopodium quinoa HOM05D004502 ORTHO05D005579 5.2e-234 815.1 801 51.8
arahy.Tifrunner.gnm1.ann1.V8X9PU Arachis hypogaea HOM05D004502 ORTHO05D005579 6.7e-234 814.7 858 50.7
arahy.Tifrunner.gnm1.ann1.0GN1Z3 Arachis hypogaea HOM05D004502 ORTHO05D005579 1.5e-233 813.5 855 51.1
TPR.G17909 Trifolium pratense HOM05D004502 ORTHO05D005579 1.5e-233 813.5 859 51.2
PGSC0003DMG400000181 Solanum tuberosum HOM05D004502 ORTHO05D005579 4.4e-233 812.0 809 51.2
PSO782G3525 Papaver somniferum HOM05D004502 ORTHO05D005579 5.7e-233 811.6 817 51.8
Psat3g107400 Pisum sativum HOM05D004502 ORTHO05D005579 9.7e-233 810.8 815 51.3
SalBow3G3684 Salvia bowleyana HOM05D004502 ORTHO05D005579 1.3e-232 810.4 817 51.7
FAN01G2073 Fragaria x ananassa HOM05D004502 ORTHO05D005579 2.8e-232 809.3 841 50.7
Aa31LG1G27460 Aethionema arabicum HOM05D004502 ORTHO05D005579 1.4e-231 807.0 829 51.7
ECA236G0795 Erigeron canadensis HOM05D004502 ORTHO05D005579 5.3e-231 805.1 807 51.9
FAN06G0667 Fragaria x ananassa HOM05D004502 ORTHO05D005579 4.5e-230 802.0 834 50.1
FAN10G2351 Fragaria x ananassa HOM05D004502 ORTHO05D005579 1.0e-229 800.8 840 50.1
ClCG06G003550 Citrullus lanatus HOM05D004502 ORTHO05D005579 1.1e-228 797.3 863 49.9
vmacro13259 Vaccinium macrocarpon HOM05D004502 ORTHO05D005579 7.2e-228 794.7 798 52.6
AL4G45280 Arabidopsis lyrata HOM05D004502 ORTHO05D005579 9.4e-228 794.3 853 49.4
MSTRG.17285 Avicennia marina HOM05D004502 ORTHO05D005579 1.2e-227 793.9 817 51.9
CARHR141310 Cardamine hirsuta HOM05D004502 ORTHO05D005579 1.4e-226 790.4 837 49.6
Thhalv10001314m.g Eutrema salsugineum HOM05D004502 ORTHO05D005579 1.8e-226 790.0 837 49.9
FAN06G1095 Fragaria x ananassa HOM05D004502 ORTHO05D005579 2.6e-225 786.2 841 49.7
Sp4g28120 Schrenkiella parvula HOM05D004502 ORTHO05D005579 1.3e-224 783.9 849 49.4
Aqoxy7G00261 Aquilegia oxysepala HOM05D004502 ORTHO05D005579 6.3e-224 781.6 727 58.7
AT2G46060 Arabidopsis thaliana HOM05D004502 ORTHO05D005579 8.3e-224 781.2 849 48.9
Carub.0004s2875 Capsella rubella HOM05D004502 ORTHO05D005579 3.1e-223 779.2 851 49.2
Ca_23605_v3 Cicer arietinum L. HOM05D004502 ORTHO05D005579 9.1e-223 777.7 730 56.0
Phvul.008G060500 Phaseolus vulgaris HOM05D004502 ORTHO05D005579 4.5e-222 775.4 771 52.8
arahy.Tifrunner.gnm1.ann1.04AGHE Arachis hypogaea HOM05D004502 ORTHO05D005579 6.6e-221 771.5 854 49.9
COL.COLO4_12736 Corchorus olitorius HOM05D004502 ORTHO05D005579 8.6e-221 771.2 706 56.9
SGA_v2.0_scaffold95G28821 Striga asiatica HOM05D004502 ORTHO05D005579 1.8e-218 763.5 797 51.6
Prupe.2G173600 Prunus persica HOM05D004502 ORTHO05D005579 4.0e-218 762.3 710 55.8
FAN10G2492 Fragaria x ananassa HOM05D004502 ORTHO05D005579 1.2e-217 760.8 840 48.3
C04p06950 Brassica napus HOM05D004502 ORTHO05D005579 2.6e-217 759.6 841 48.8
BolC4t22316H Brassica oleracea HOM05D004502 ORTHO05D005579 2.6e-217 759.6 841 48.8
A05p06020 Brassica napus HOM05D004502 ORTHO05D005579 4.9e-216 755.4 856 48.4
BraA05t19565Z Brassica rapa HOM05D004502 ORTHO05D005579 4.9e-216 755.4 818 49.0
BraA04t18886Z Brassica rapa HOM05D004502 ORTHO05D005579 3.1e-215 752.7 847 48.2
HPP92_022633 Vanilla planifolia HOM05D004502 ORTHO05D005579 5.0e-213 745.3 845 47.3
Gohir.D08G153200 Gossypium hirsutum HOM05D004502 ORTHO05D005579 1.1e-212 744.2 689 56.2
A04p34250 Brassica napus HOM05D004502 ORTHO05D005579 9.5e-212 741.1 857 46.7
Ca_00829_v3 Cicer arietinum L. HOM05D004502 ORTHO05D005579 2.8e-211 739.6 731 53.4
Nitab4.5_0010258g0020 Nicotiana tabacum HOM05D004502 ORTHO05D005579 5.2e-210 735.3 795 49.1
Os10g0446200 Oryza sativa ssp. japonica HOM05D004502 ORTHO05D005579 1.2e-209 734.2 857 46.4
C04p72070 Brassica napus HOM05D004502 ORTHO05D005579 2.6e-209 733.0 874 46.0
Rhsim01G0146800 Rhododendron simsii HOM05D004502 ORTHO05D005579 6.4e-208 728.4 862 48.7
MBI18_g32047_MAGBIO Magnolia biondii HOM05D004502 ORTHO05D005579 1.4e-207 727.2 984 44.9
Psat4g212960 Pisum sativum HOM05D004502 ORTHO05D005579 2.3e-205 719.9 677 55.7
QL12p032431 Quercus lobata HOM05D004502 ORTHO05D005579 1.1e-204 717.6 845 47.1
ATR0680G297 Amborella trichopoda HOM05D004502 ORTHO05D005579 2.1e-203 713.4 909 44.3
AUR62022593 Chenopodium quinoa HOM05D004502 ORTHO05D005579 7.0e-199 698.4 669 52.3
vmacro20915 Vaccinium macrocarpon HOM05D004502 ORTHO05D005579 8.3e-192 674.9 651 55.6
TWI60G0172 Tripterygium wilfordii HOM05D004502 ORTHO05D005579 1.6e-190 670.6 830 44.7
Nitab4.5_0000583g0350 Nicotiana tabacum HOM05D004502 ORTHO05D005579 3.4e-185 652.9 868 43.3
EL10Ac1g00390 Beta vulgaris HOM05D004502 ORTHO05D005579 1.8e-178 630.6 855 42.7
COL.COLO4_34496 Corchorus olitorius HOM05D004502 ORTHO05D005579 3.5e-174 616.3 831 40.8
Zm00001eb222430 Zea mays HOM05D004502 ORTHO05D005579 3.3e-172 609.8 714 46.1
MELO3C021198.2 Cucumis melo HOM05D004502 ORTHO05D005579 2.6e-169 600.1 544 55.5
MD01G1067200 Malus domestica HOM05D004502 ORTHO05D005579 1.6e-163 580.9 604 49.7
SHI13432 Sapria himalayana HOM05D004502 ORTHO05D005579 2.0e-153 547.4 720 45.4
DCAR_008618 Daucus carota HOM05D004502 ORTHO05D005579 1.1e-138 498.4 414 59.4
TAR375G0606 Trochodendron aralioides HOM05D004502 ORTHO05D005579 5.9e-137 492.7 423 58.6
FAN03G0719 Fragaria x ananassa HOM05D004502 ORTHO05D005579 4.1e-130 469.9 747 38.0
Ah.05g180370 Amaranthus hybridus HOM05D004502 ORTHO05D005579 3.2e-127 460.3 528 45.5
AUR62010714 Chenopodium quinoa HOM05D004502 ORTHO05D005579 3.2e-119 433.7 740 36.5
Glyma.16G034551 Glycine max HOM05D004502 ORTHO05D005579 1.5e-116 424.9 369 60.4
Gohir.A08G131800 Gossypium hirsutum HOM05D004502 ORTHO05D005579 1.4e-114 418.3 372 57.8
Haze_08811 Corylus avellana HOM05D004502 ORTHO05D005579 1.8e-109 401.4 492 45.5
Gohir.A08G131900 Gossypium hirsutum HOM05D004502 ORTHO05D005579 8.6e-104 382.5 394 51.0
Mapoly0035s0107 Marchantia polymorpha HOM05D004502 ORTHO05D005579 6.2e-94 349.7 799 30.7
Pp3c10_11170 Physcomitrium patens HOM05D004502 ORTHO05D005579 2.4e-90 337.8 951 27.9
unitig_26.g9298 Utricularia gibba HOM05D004502 ORTHO05D005579 5.0e-88 330.1 349 50.4
CDE06G0820 Ceratophyllum demersum HOM05D004502 ORTHO05D005579 5.6e-87 326.6 350 45.1
Hund14837 Selenicereus undatus HOM05D004502 ORTHO05D005579 1.8e-85 321.6 457 40.0
Glyma.16G034476 Glycine max HOM05D004502 ORTHO05D005579 4.9e-83 313.5 368 45.4
unitig_26.g9297 Utricularia gibba HOM05D004502 ORTHO05D005579 4.4e-76 290.4 404 42.8
SEGI_07374 Sequoiadendron giganteum HOM05D004502 ORTHO05D005579 2.4e-69 268.1 404 37.4
Cc08_g14990 Coffea canephora HOM05D004502 ORTHO05D005579 2.7e-65 254.6 325 43.1
COL.COLO4_28934 Corchorus olitorius HOM05D004502 ORTHO05D005579 3.5e-57 227.6 200 57.0
MELO3C021197.2 Cucumis melo HOM05D004502 ORTHO05D005579 1.5e-52 212.2 283 43.8
vmacro20916 Vaccinium macrocarpon HOM05D004502 ORTHO05D005579 7.1e-42 176.8 205 48.3
MD01G1067000 Malus domestica HOM05D004502 ORTHO05D005579 1.1e-39 169.5 208 47.6
CBR_g17145 Chara braunii HOM05D004502 ORTHO05D005579 1.4e-29 136.0 107 53.3
MELO3C031211.2 Cucumis melo HOM05D004502 ORTHO05D005579 4.1e-21 107.8 139 43.9
CDE06G0272 Ceratophyllum demersum HOM05D004502 ORTHO05D005579 9.1e-21 106.7 114 60.5
Hund14845 Selenicereus undatus HOM05D004502 ORTHO05D005579 5.9e-20 104.0 112 50.9
Hund14838 Selenicereus undatus HOM05D004502 ORTHO05D005579 9.4e-18 96.7 159 33.3
TPR.G24958 Trifolium pratense HOM05D004502 ORTHO05D005579 1.1e-15 89.7 107 47.7
arahy.Tifrunner.gnm1.ann1.R57FTB Arachis hypogaea HOM05D004502 ORTHO05D002623 7.2e-10 70.5 35 88.6
arahy.Tifrunner.gnm1.ann1.YV6W0W Arachis hypogaea HOM05D000064 ORTHO05D001480 2.7e-09 68.6 57 54.4
arahy.Tifrunner.gnm1.ann1.I8C0YZ Arachis hypogaea HOM05D000064 ORTHO05D001480 8.0e-09 67.0 57 52.6
MELO3C034807.2 Cucumis melo HOM05D004502 ORTHO05D011879 8.8e-08 63.5 85 41.2
SEGI_31877 Sequoiadendron giganteum HOM05D004502 ORTHO05D005579 2.8e-06 58.5 92 33.7
Thecc.03G282200 Theobroma cacao HOM05D004502 ORTHO05D005579 3.7e-06 58.2 58 51.7


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