Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00246 Aquilegia oxysepala HOM05D007598 ORTHO05D009632 2.7e-29 131.3 67 100.0
CsaV3_6G051780 Cucumis sativus L. HOM05D007598 ORTHO05D009632 1.8e-20 102.1 66 75.8
ClCG01G024670 Citrullus lanatus HOM05D007598 ORTHO05D009632 5.1e-20 100.5 66 75.8
MELO3C007128.2 Cucumis melo HOM05D007598 ORTHO05D009632 6.7e-20 100.1 66 75.8
Actinidia39580 Actinidia chinensis HOM05D007598 ORTHO05D009632 8.7e-20 99.8 67 73.1
Dinv32243 Davidia involucrata HOM05D007598 ORTHO05D009632 1.1e-19 99.4 66 72.7
Rhsim02G0159000 Rhododendron simsii HOM05D007598 ORTHO05D009632 2.5e-19 98.2 69 69.6
Nn3g20182 Nelumbo nucifera HOM05D007598 ORTHO05D009632 4.3e-19 97.4 67 74.6
Nitab4.5_0000420g0040 Nicotiana tabacum HOM05D007598 ORTHO05D009632 7.4e-19 96.7 66 71.2
MBI02_g15148_MAGBIO Magnolia biondii HOM05D007598 ORTHO05D009632 1.3e-18 95.9 58 77.6
Nitab4.5_0006887g0010 Nicotiana tabacum HOM05D007598 ORTHO05D009632 1.6e-18 95.5 66 68.2
Psat1g188680 Pisum sativum HOM05D007598 ORTHO05D009632 4.8e-18 94.0 59 74.6
Thecc.06G149600 Theobroma cacao HOM05D007598 ORTHO05D009632 4.8e-18 94.0 63 73.0
AUR62002748 Chenopodium quinoa HOM05D007598 ORTHO05D009632 6.2e-18 93.6 66 69.7
AUR62030196 Chenopodium quinoa HOM05D007598 ORTHO05D009632 6.2e-18 93.6 66 69.7
Manes.17G070801 Manihot esculenta HOM05D007598 ORTHO05D009632 6.2e-18 93.6 64 71.9
arahy.Tifrunner.gnm1.ann1.A3G0A3 Arachis hypogaea HOM05D007598 ORTHO05D009632 8.1e-18 93.2 67 67.2
arahy.Tifrunner.gnm1.ann1.KTXA2U Arachis hypogaea HOM05D007598 ORTHO05D009632 8.1e-18 93.2 67 67.2
CSS0006536 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 8.1e-18 93.2 61 77.0
CSS0035986 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 8.1e-18 93.2 61 77.0
Actinidia07703 Actinidia chinensis HOM05D007598 ORTHO05D009632 1.1e-17 92.8 68 72.1
Gohir.D10G042400 Gossypium hirsutum HOM05D007598 ORTHO05D009632 2.4e-17 91.7 69 71.0
PSO541G2526 Papaver somniferum HOM05D007598 ORTHO05D009632 4.0e-17 90.9 74 68.9
Sed0007826 Sechium edule HOM05D007598 ORTHO05D009632 5.3e-17 90.5 66 68.2
THA.LOC104820651 Tarenaya hassleriana HOM05D007598 ORTHO05D009632 5.3e-17 90.5 70 67.1
Cfa000936 Carpinus fangiana HOM05D007598 ORTHO05D009632 9.0e-17 89.7 64 71.9
Glyma.13G218700 Glycine max HOM05D007598 ORTHO05D009632 1.2e-16 89.4 64 70.3
TAR626G0451 Trochodendron aralioides HOM05D007598 ORTHO05D009632 1.5e-16 89.0 61 73.8
CAN.G702.32 Capsicum annuum HOM05D007598 ORTHO05D009632 2.0e-16 88.6 66 65.2
Cc00_g10360 Coffea canephora HOM05D007598 ORTHO05D009632 2.0e-16 88.6 59 69.5
FvH4_3g05470 Fragaria vesca HOM05D007598 ORTHO05D009632 2.0e-16 88.6 59 74.6
FAN11G3574 Fragaria x ananassa HOM05D007598 ORTHO05D009632 2.0e-16 88.6 59 74.6
Lalb_Chr20g0117881 Lupinus albus HOM05D007598 ORTHO05D009632 2.0e-16 88.6 59 71.2
Prupe.4G081500 Prunus persica HOM05D007598 ORTHO05D009632 2.0e-16 88.6 66 66.7
Ca_00537_v3 Cicer arietinum L. HOM05D007598 ORTHO05D009632 2.6e-16 88.2 59 71.2
Aa31LG10G6810 Aethionema arabicum HOM05D007598 ORTHO05D009632 4.5e-16 87.4 69 65.2
Phvul.006G165400 Phaseolus vulgaris HOM05D007598 ORTHO05D009632 4.5e-16 87.4 60 68.3
SalBow8G5536 Salvia bowleyana HOM05D007598 ORTHO05D009632 4.5e-16 87.4 63 68.3
CANSAT35G0825 Cannabis sativa HOM05D007598 ORTHO05D009632 5.8e-16 87.0 60 71.7
FAN16G2639 Fragaria x ananassa HOM05D007598 ORTHO05D009632 5.8e-16 87.0 59 72.9
FAN21G2813 Fragaria x ananassa HOM05D007598 ORTHO05D009632 5.8e-16 87.0 59 72.9
MD05G1283100 Malus domestica HOM05D007598 ORTHO05D009632 5.8e-16 87.0 61 72.1
MD10G1261400 Malus domestica HOM05D007598 ORTHO05D009632 5.8e-16 87.0 59 72.9
EL10Ac8g19673 Beta vulgaris HOM05D007598 ORTHO05D009632 7.6e-16 86.7 66 66.7
DCAR_027909 Daucus carota HOM05D007598 ORTHO05D009632 7.6e-16 86.7 67 67.2
FAN25G0892 Fragaria x ananassa HOM05D007598 ORTHO05D009632 7.6e-16 86.7 59 72.9
CiPaw.10G091200 Carya illinoinensis HOM05D007598 ORTHO05D009632 9.9e-16 86.3 67 67.2
Migut.M01992 Erythranthe guttata HOM05D007598 ORTHO05D009632 1.3e-15 85.9 58 72.4
Rhsim13G0114100 Rhododendron simsii HOM05D007598 ORTHO05D009632 1.3e-15 85.9 62 66.1
Sabra11G0066800 Salix brachista HOM05D007598 ORTHO05D009632 1.3e-15 85.9 71 62.0
Carub.0004s1626 Capsella rubella HOM05D007598 ORTHO05D009632 1.7e-15 85.5 75 61.3
Medtr2g019240 Medicago truncatula HOM05D007598 ORTHO05D009632 1.7e-15 85.5 63 63.5
RcHm_v2.0_Chr5g0014281 Rosa chinensis HOM05D007598 ORTHO05D009632 1.7e-15 85.5 60 70.0
TWI53G0871 Tripterygium wilfordii HOM05D007598 ORTHO05D009632 1.7e-15 85.5 59 74.6
Ah.14g086510 Amaranthus hybridus HOM05D007598 ORTHO05D009632 2.2e-15 85.1 58 70.7
Cpa.g.sc170.27 Carica papaya HOM05D007598 ORTHO05D009632 2.2e-15 85.1 68 66.2
Migut.M00903 Erythranthe guttata HOM05D007598 ORTHO05D009632 2.2e-15 85.1 58 72.4
Potri.011G084300 Populus trichocarpa HOM05D007598 ORTHO05D009632 2.9e-15 84.7 62 69.4
Glyma.15G093500 Glycine max HOM05D007598 ORTHO05D009632 3.8e-15 84.3 65 63.1
Lj6g0001552 Lotus japonicus HOM05D007598 ORTHO05D009632 3.8e-15 84.3 66 65.2
Nitab4.5_0002744g0030 Nicotiana tabacum HOM05D007598 ORTHO05D009632 3.8e-15 84.3 61 68.9
HanXRQChr04g0114301 Helianthus annuus HOM05D007598 ORTHO05D009632 4.9e-15 84.0 59 69.5
AT2G34585 Arabidopsis thaliana HOM05D007598 ORTHO05D009632 6.4e-15 83.6 73 61.6
CARHR128680 Cardamine hirsuta HOM05D007598 ORTHO05D009632 6.4e-15 83.6 73 61.6
PGSC0003DMG400021093 Solanum tuberosum HOM05D007598 ORTHO05D009632 6.4e-15 83.6 66 63.6
HPP92_000988 Vanilla planifolia HOM05D007598 ORTHO05D009632 1.1e-14 82.8 66 69.7
AL4G30560 Arabidopsis lyrata HOM05D007598 ORTHO05D009632 1.4e-14 82.4 73 61.6
Lsat_1_v5_gn_7_28481 Lactuca sativa HOM05D007598 ORTHO05D009632 1.4e-14 82.4 59 69.5
HanXRQChr15g0480881 Helianthus annuus HOM05D007598 ORTHO05D009632 1.9e-14 82.0 58 70.7
Os07g0154300 Oryza sativa ssp. japonica HOM05D007598 ORTHO05D009632 1.9e-14 82.0 48 77.1
Sc05g0006160 Simmondsia chinensis HOM05D007598 ORTHO05D009632 2.4e-14 81.6 64 60.9
BcaB06g28784 Brassica carinata HOM05D007598 ORTHO05D009632 3.2e-14 81.3 71 63.4
Solyc02g070470.1 Solanum lycopersicum HOM05D007598 ORTHO05D009632 4.2e-14 80.9 66 62.1
Sopen02g019560 Solanum pennellii HOM05D007598 ORTHO05D009632 4.2e-14 80.9 68 63.2
unitig_749.g13736 Utricularia gibba HOM05D007598 ORTHO05D009632 4.2e-14 80.9 66 62.1
A04p26490 Brassica napus HOM05D007598 ORTHO05D009632 5.5e-14 80.5 69 62.3
C04p63910 Brassica napus HOM05D007598 ORTHO05D009632 5.5e-14 80.5 69 62.3
BolC4t27858H Brassica oleracea HOM05D007598 ORTHO05D009632 5.5e-14 80.5 69 62.3
BraA04t18153Z Brassica rapa HOM05D007598 ORTHO05D009632 5.5e-14 80.5 69 62.3
PGR042G1521 Punica granatum HOM05D007598 ORTHO05D009632 5.5e-14 80.5 66 63.6
ECA236G0778 Erigeron canadensis HOM05D007598 ORTHO05D009632 7.1e-14 80.1 46 80.4
Atru.chr10.1775 Acer truncatum HOM05D007598 ORTHO05D009632 1.2e-13 79.3 67 62.7
SEGI_36626 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 1.2e-13 79.3 48 72.9
Zm00001eb117510 Zea mays HOM05D007598 ORTHO05D009632 1.6e-13 79.0 58 65.5
ATR1098G093 Amborella trichopoda HOM05D007598 ORTHO05D009632 2.1e-13 78.6 67 62.7
Sp4g16850 Schrenkiella parvula HOM05D007598 ORTHO05D009632 2.1e-13 78.6 71 62.0
COL.COLO4_31062 Corchorus olitorius HOM05D007598 ORTHO05D009632 4.6e-13 77.4 46 76.1
Duzib235G0096 Durio zibethinus HOM05D007598 ORTHO05D009632 4.6e-13 77.4 74 60.8
QL05p057697 Quercus lobata HOM05D007598 ORTHO05D009632 7.9e-13 76.6 68 60.3
PGSC0003DMG400012092 Solanum tuberosum HOM05D007598 ORTHO05D009632 1.3e-12 75.9 53 66.0
Ciclev10017916m.g Citrus clementina HOM05D007598 ORTHO05D009632 5.1e-12 73.9 75 57.3
Thhalv10017600m.g Eutrema salsugineum HOM05D007598 ORTHO05D009632 1.1e-11 72.8 73 54.8
Actinidia16706 Actinidia chinensis HOM05D000667 ORTHO05D004096 1.8e-09 65.5 45 71.1
Pp3c14_11250 Physcomitrium patens HOM05D007598 ORTHO05D009632 2.4e-09 65.1 68 54.4
Mapoly0055s0099 Marchantia polymorpha HOM05D007598 ORTHO05D009632 4.0e-09 64.3 49 57.1
SEGI_00564 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 6.9e-09 63.5 51 56.9
Aqoxy6G00608 Aquilegia oxysepala HOM05D007833 ORTHO05D009855 1.9e-06 55.5 53 45.3


User provided reference genes

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