Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00233 Aquilegia oxysepala HOM05D006032 ORTHO05D007544 6.3e-146 520.8 266 100.0
GSVIVG01027006001 Vitis vinifera HOM05D006032 ORTHO05D007544 7.0e-105 384.4 264 73.9
Atru.chr5.551 Acer truncatum HOM05D006032 ORTHO05D007544 1.9e-102 376.3 264 72.3
Thecc.01G353900 Theobroma cacao HOM05D006032 ORTHO05D007544 2.5e-102 375.9 269 72.1
Nn1g01650 Nelumbo nucifera HOM05D006032 ORTHO05D007544 1.2e-101 373.6 266 72.6
Ciclev10021696m.g Citrus clementina HOM05D006032 ORTHO05D007544 2.1e-101 372.9 264 72.3
COL.COLO4_12764 Corchorus olitorius HOM05D006032 ORTHO05D007544 2.8e-101 372.5 268 73.1
Manes.01G253200 Manihot esculenta HOM05D006032 ORTHO05D007544 4.7e-101 371.7 267 71.9
Sopen09g002430 Solanum pennellii HOM05D006032 ORTHO05D007544 8.0e-101 370.9 260 70.8
PGSC0003DMG400001748 Solanum tuberosum HOM05D006032 ORTHO05D007544 8.0e-101 370.9 260 70.4
TWI59G0434 Tripterygium wilfordii HOM05D006032 ORTHO05D007544 1.4e-100 370.2 267 71.5
PGR031G1164 Punica granatum HOM05D006032 ORTHO05D007544 3.0e-100 369.0 265 71.3
PSO782G5129 Papaver somniferum HOM05D006032 ORTHO05D007544 6.8e-100 367.9 271 72.7
CSS0027447 Camellia sinensis var. sinensis HOM05D006032 ORTHO05D007544 2.6e-99 365.9 266 72.2
Cpa.g.sc184.23 Carica papaya HOM05D006032 ORTHO05D007544 2.9e-98 362.5 264 70.5
CANSAT56G0440 Cannabis sativa HOM05D006032 ORTHO05D007544 8.3e-98 360.9 265 70.9
PSO478G3538 Papaver somniferum HOM05D006032 ORTHO05D007544 1.4e-97 360.1 272 71.0
MSTRG.20857 Avicennia marina HOM05D006032 ORTHO05D007544 4.1e-97 358.6 268 69.8
Glyma.09G255500 Glycine max HOM05D006032 ORTHO05D007544 4.1e-97 358.6 260 68.1
AT4G01310 Arabidopsis thaliana HOM05D006032 ORTHO05D007544 5.4e-97 358.2 268 70.1
CiPaw.01G065600 Carya illinoinensis HOM05D006032 ORTHO05D007544 7.0e-97 357.8 264 69.7
AL6G52090 Arabidopsis lyrata HOM05D006032 ORTHO05D007544 9.2e-97 357.5 266 69.9
Haze_15552 Corylus avellana HOM05D006032 ORTHO05D007544 9.2e-97 357.5 264 69.7
Lj7A509T108 Lonicera japonica HOM05D006032 ORTHO05D007544 1.2e-96 357.1 260 70.4
THA.LOC104817034 Tarenaya hassleriana HOM05D006032 ORTHO05D007544 1.2e-96 357.1 264 70.5
Nitab4.5_0006802g0050 Nicotiana tabacum HOM05D006032 ORTHO05D007544 2.0e-96 356.3 263 70.7
TAR629G0912 Trochodendron aralioides HOM05D006032 ORTHO05D007544 2.7e-96 355.9 266 69.5
Glyma.18G237400 Glycine max HOM05D006032 ORTHO05D007544 5.9e-96 354.8 260 68.1
Phvul.008G059200 Phaseolus vulgaris HOM05D006032 ORTHO05D007544 1.0e-95 354.0 260 68.1
Cfa003882 Carpinus fangiana HOM05D006032 ORTHO05D007544 1.3e-95 353.6 264 69.3
Lsat_1_v5_gn_7_3801 Lactuca sativa HOM05D006032 ORTHO05D007544 1.3e-95 353.6 256 69.9
Carub.0006s3637 Capsella rubella HOM05D006032 ORTHO05D007544 1.7e-95 353.2 266 69.2
Lalb_Chr19g0126911 Lupinus albus HOM05D006032 ORTHO05D007544 2.3e-95 352.8 265 69.1
Nitab4.5_0002682g0080 Nicotiana tabacum HOM05D006032 ORTHO05D007544 2.3e-95 352.8 263 70.0
Gohir.D07G146100 Gossypium hirsutum HOM05D006032 ORTHO05D007544 3.0e-95 352.4 276 67.4
VMungo1383G0296 Vigna mungo HOM05D006032 ORTHO05D007544 3.0e-95 352.4 261 68.6
Cc02_g38440 Coffea canephora HOM05D006032 ORTHO05D007544 3.9e-95 352.1 265 70.6
QL04p055082 Quercus lobata HOM05D006032 ORTHO05D007544 3.9e-95 352.1 265 69.1
SalBow3G2277 Salvia bowleyana HOM05D006032 ORTHO05D007544 3.9e-95 352.1 267 69.3
Gohir.A07G140700 Gossypium hirsutum HOM05D006032 ORTHO05D007544 6.6e-95 351.3 276 67.0
Gorai.001G158300 Gossypium raimondii HOM05D006032 ORTHO05D007544 6.6e-95 351.3 276 67.0
arahy.Tifrunner.gnm1.ann1.XQ5AKE Arachis hypogaea HOM05D006032 ORTHO05D007544 8.6e-95 350.9 264 66.3
Thhalv10028885m.g Eutrema salsugineum HOM05D006032 ORTHO05D007544 8.6e-95 350.9 267 68.5
Hma1.2p1_2961F.1_g330870 Hydrangea macrophylla HOM05D006032 ORTHO05D007544 8.6e-95 350.9 267 70.4
arahy.Tifrunner.gnm1.ann1.S0M071 Arachis hypogaea HOM05D006032 ORTHO05D007544 2.5e-94 349.4 262 66.8
CDE04G3178 Ceratophyllum demersum HOM05D006032 ORTHO05D007544 2.5e-94 349.4 268 69.8
CARHR249010 Cardamine hirsuta HOM05D006032 ORTHO05D007544 3.3e-94 349.0 266 67.7
DCAR_006944 Daucus carota HOM05D006032 ORTHO05D007544 4.3e-94 348.6 260 71.2
Eucgr.D02319 Eucalyptus grandis HOM05D006032 ORTHO05D007544 4.3e-94 348.6 267 66.3
ClCG05G001320 Citrullus lanatus HOM05D006032 ORTHO05D007544 5.6e-94 348.2 267 67.4
ECA236G4677 Erigeron canadensis HOM05D006032 ORTHO05D007544 5.6e-94 348.2 256 69.1
Prupe.2G175800 Prunus persica HOM05D006032 ORTHO05D007544 5.6e-94 348.2 266 68.0
MELO3C006088.2 Cucumis melo HOM05D006032 ORTHO05D007544 7.3e-94 347.8 269 66.9
Migut.B01790 Erythranthe guttata HOM05D006032 ORTHO05D007544 7.3e-94 347.8 263 69.2
CAN.G1091.3 Capsicum annuum HOM05D006032 ORTHO05D007544 9.5e-94 347.4 261 69.3
CsaV3_3G008690 Cucumis sativus L. HOM05D006032 ORTHO05D007544 1.6e-93 346.7 270 67.4
Sabra02G0122600 Salix brachista HOM05D006032 ORTHO05D007544 1.6e-93 346.7 269 67.3
Sp6g00830 Schrenkiella parvula HOM05D006032 ORTHO05D007544 1.6e-93 346.7 267 67.8
BcaC01g06855 Brassica carinata HOM05D006032 ORTHO05D007544 2.1e-93 346.3 266 68.8
BolC3t16171H Brassica oleracea HOM05D006032 ORTHO05D007544 2.1e-93 346.3 266 68.8
HanXRQChr06g0170291 Helianthus annuus HOM05D006032 ORTHO05D007544 2.1e-93 346.3 257 69.3
Sc01g0003280 Simmondsia chinensis HOM05D006032 ORTHO05D007544 2.1e-93 346.3 269 67.7
Oeu054338.1 Olea europaea HOM05D006032 ORTHO05D007544 2.8e-93 345.9 265 69.4
BcaB01g02282 Brassica carinata HOM05D006032 ORTHO05D007544 3.6e-93 345.5 266 67.7
C03p38990 Brassica napus HOM05D006032 ORTHO05D007544 3.6e-93 345.5 266 68.8
AUR62022608 Chenopodium quinoa HOM05D006032 ORTHO05D007544 6.2e-93 344.7 266 65.8
BcaB01g02152 Brassica carinata HOM05D006032 ORTHO05D007544 1.1e-92 344.0 266 66.9
Rhsim12G0138500 Rhododendron simsii HOM05D006032 ORTHO05D007544 1.1e-92 344.0 262 68.7
AUR62004402 Chenopodium quinoa HOM05D006032 ORTHO05D007544 4.0e-92 342.0 266 65.0
Lj4g0026145 Lotus japonicus HOM05D006032 ORTHO05D007544 4.0e-92 342.0 264 66.7
Potri.002G154600 Populus trichocarpa HOM05D006032 ORTHO05D007544 4.4e-91 338.6 267 65.9
CDE12G0723 Ceratophyllum demersum HOM05D006032 ORTHO05D007544 5.8e-91 338.2 247 71.3
MD01G1069800 Malus domestica HOM05D006032 ORTHO05D007544 5.8e-91 338.2 267 67.0
BcaC04g24141 Brassica carinata HOM05D006032 ORTHO05D007544 7.5e-91 337.8 266 66.5
Sed0022476 Sechium edule HOM05D006032 ORTHO05D007544 3.7e-90 335.5 267 65.2
Medtr7g078800 Medicago truncatula HOM05D006032 ORTHO05D007544 1.1e-89 334.0 260 66.9
TPR.G22296 Trifolium pratense HOM05D006032 ORTHO05D007544 1.1e-89 334.0 262 67.2
FAN10G0977 Fragaria x ananassa HOM05D006032 ORTHO05D007544 9.2e-89 330.9 266 65.8
FAN10G2244 Fragaria x ananassa HOM05D006032 ORTHO05D007544 9.2e-89 330.9 266 65.8
FAN03G1341 Fragaria x ananassa HOM05D006032 ORTHO05D007544 1.6e-88 330.1 266 66.2
FAN06G2046 Fragaria x ananassa HOM05D006032 ORTHO05D007544 1.6e-88 330.1 266 66.2
FAN06G3864 Fragaria x ananassa HOM05D006032 ORTHO05D007544 1.6e-88 330.1 266 66.2
Ca_00819_v3 Cicer arietinum L. HOM05D006032 ORTHO05D007544 2.0e-88 329.7 264 66.7
RcHm_v2.0_Chr1g0357301 Rosa chinensis HOM05D006032 ORTHO05D007544 2.0e-88 329.7 266 65.0
ATR0661G584 Amborella trichopoda HOM05D006032 ORTHO05D007544 2.7e-88 329.3 253 67.2
Psat3g107160 Pisum sativum HOM05D006032 ORTHO05D007544 2.7e-88 329.3 267 66.7
SGA_v2.0_scaffold95G28814 Striga asiatica HOM05D006032 ORTHO05D007544 2.7e-88 329.3 278 64.7
FvH4_7g15110 Fragaria vesca HOM05D006032 ORTHO05D007544 4.6e-88 328.6 266 65.8
Aa31LG5G740 Aethionema arabicum HOM05D003611 ORTHO05D007544 6.0e-88 328.2 243 70.0
MD07G1132700 Malus domestica HOM05D006032 ORTHO05D007544 6.0e-88 328.2 267 65.9
EL10Ac1g00366 Beta vulgaris HOM05D006032 ORTHO05D007544 3.0e-87 325.9 311 57.9
A09p00050 Brassica napus HOM05D003611 ORTHO05D004281 2.5e-86 322.8 253 66.0
BraA09t35736Z Brassica rapa HOM05D003611 ORTHO05D004281 2.5e-86 322.8 253 66.0
BolC9t53001H Brassica oleracea HOM05D003611 ORTHO05D004281 4.3e-86 322.0 255 66.3
C09p00670 Brassica napus HOM05D003611 ORTHO05D004281 9.5e-86 320.9 255 66.3
Ah.05g180230 Amaranthus hybridus HOM05D003611 ORTHO05D007544 3.7e-82 308.9 266 62.8
HPP92_025634 Vanilla planifolia HOM05D006032 ORTHO05D007544 6.4e-82 308.1 217 68.2
unitig_22.g5344 Utricularia gibba HOM05D003213 ORTHO05D003693 1.9e-81 306.6 200 74.0
Potri.014G089100 Populus trichocarpa HOM05D006032 ORTHO05D007544 2.5e-78 296.2 264 59.8
Hund27251 Selenicereus undatus HOM05D006032 ORTHO05D007544 9.5e-78 294.3 239 62.8
Peaxi162Scf00815g00338 Petunia axillaris HOM05D006032 ORTHO05D007544 1.6e-77 293.5 180 78.3
Zm00001eb001840 Zea mays HOM05D006032 ORTHO05D007544 2.1e-77 293.1 222 66.2
Os03g0125000 Oryza sativa ssp. japonica HOM05D006032 ORTHO05D007544 1.1e-76 290.8 219 64.4
vmacro20901 Vaccinium macrocarpon HOM05D006032 ORTHO05D007544 1.0e-71 274.2 260 58.8
MBI04_g41504_MAGBIO Magnolia biondii HOM05D006032 ORTHO05D007544 1.1e-70 270.8 262 58.8
Dinv32511 Davidia involucrata HOM05D006032 ORTHO05D007544 2.8e-69 266.2 225 62.2
Mapoly0001s0334 Marchantia polymorpha HOM05D006032 ORTHO05D007544 3.6e-69 265.8 223 59.6
Pp3c1_25850 Physcomitrium patens HOM05D006032 ORTHO05D007544 6.9e-68 261.5 267 50.9
Pp3c2_17110 Physcomitrium patens HOM05D006032 ORTHO05D007544 6.9e-68 261.5 220 54.5
AagrBONN_evm.TU.Sc2ySwM_228.1445 Anthoceros agrestis HOM05D006032 ORTHO05D007544 1.3e-66 257.3 204 59.3
A03p31970 Brassica napus HOM05D006032 ORTHO05D007544 1.2e-64 250.8 202 65.8
BraA03t12369Z Brassica rapa HOM05D006032 ORTHO05D007544 1.2e-64 250.8 202 65.8
SMO358G0099 Selaginella moellendorffii HOM05D006032 ORTHO05D007544 1.3e-63 247.3 177 63.3
FAN01G2970 Fragaria x ananassa HOM05D006032 ORTHO05D007544 2.8e-61 239.6 197 64.0
Solyc09g007560.4 Solanum lycopersicum HOM05D006032 ORTHO05D007544 6.9e-60 235.0 178 66.9
SEGI_08351 Sequoiadendron giganteum HOM05D006032 ORTHO05D007544 8.1e-53 211.5 141 68.1
MSTRG.17292 Avicennia marina HOM05D006032 ORTHO05D007544 3.1e-52 209.5 131 78.6
Haze_27649 Corylus avellana HOM05D006032 ORTHO05D007544 1.3e-42 177.6 154 53.2
COL.COLO4_27391 Corchorus olitorius HOM05D006032 ORTHO05D007544 3.8e-42 176.0 114 78.9
Cfa021143 Carpinus fangiana HOM05D006032 ORTHO05D001488 1.0e-39 167.9 162 48.1
C02p38190 Brassica napus HOM05D006032 ORTHO05D007544 1.1e-36 157.9 265 41.9
BolC2t09834H Brassica oleracea HOM05D006032 ORTHO05D007544 1.1e-36 157.9 265 41.9
Rhsim01G0165400 Rhododendron simsii HOM05D006032 ORTHO05D007544 1.4e-36 157.5 162 58.6
BcaC03g16053 Brassica carinata HOM05D006032 ORTHO05D007544 1.8e-36 157.1 265 41.9
Sabra14G0064700 Salix brachista HOM05D006032 ORTHO05D007544 1.7e-34 150.6 112 65.2
Actinidia02824 Actinidia chinensis HOM05D006032 ORTHO05D007544 1.7e-29 134.0 89 76.4
SMO196G0051 Selaginella moellendorffii HOM05D006032 ORTHO05D007544 5.9e-27 125.6 179 36.3
Nitab4.5_0000681g0050 Nicotiana tabacum HOM05D006032 ORTHO05D007544 6.1e-24 115.5 68 80.9
Nitab4.5_0000681g0060 Nicotiana tabacum HOM05D006032 ORTHO05D007544 6.3e-21 105.5 71 70.4
VMungo1309G2152 Vigna mungo HOM05D006032 ORTHO05D007544 6.5e-18 95.5 81 61.7
Cfa024600 Carpinus fangiana HOM05D006032 ORTHO05D122942 1.0e-15 88.2 169 29.6
VMungo0647G0507 Vigna mungo HOM05D006032 ORTHO05D007227 3.7e-13 79.7 65 63.1
Psat2g092280 Pisum sativum HOM05D006032 ORTHO05D007544 1.6e-11 74.3 60 63.3
Rhsim12G0138600 Rhododendron simsii HOM05D006032 ORTHO05D007544 4.2e-09 66.2 112 43.8
Dinv43855 Davidia involucrata HOM05D006032 ORTHO05D007544 5.5e-09 65.9 39 76.9
FvH4_5g19211 Fragaria vesca HOM05D006032 ORTHO05D197553 3.0e-07 60.1 42 73.8
unitig_8.g3788 Utricularia gibba HOM05D006032 ORTHO05D007544 3.0e-07 60.1 113 33.6
Cfa027004 Carpinus fangiana HOM05D001556 ORTHO05D001505 5.2e-07 59.3 166 27.7
Cre01.g027000 Chlamydomonas reinhardtii HOM05D001556 ORTHO05D001505 2.6e-06 57.0 142 31.0
CDE10G0560 Ceratophyllum demersum HOM05D000487 ORTHO05D001505 4.4e-06 56.2 149 26.8
unitig_32.g10924 Utricularia gibba HOM05D001556 ORTHO05D001505 7.5e-06 55.5 144 29.2
TWI23G0133 Tripterygium wilfordii HOM05D001556 ORTHO05D001505 9.7e-06 55.1 165 26.7
TWI59G0955 Tripterygium wilfordii HOM05D001556 ORTHO05D001505 9.7e-06 55.1 165 26.7


User provided reference genes

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