Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00212 Aquilegia oxysepala HOM05D006803 ORTHO05D008552 3.3e-89 331.6 164 100.0
Nn1g01776 Nelumbo nucifera HOM05D006803 ORTHO05D008552 8.5e-61 237.3 166 71.1
TAR333G0006 Trochodendron aralioides HOM05D006803 ORTHO05D008552 1.4e-58 229.9 162 68.5
MBI06_g04289_MAGBIO Magnolia biondii HOM05D006803 ORTHO05D008552 4.1e-55 218.4 170 67.1
Actinidia34181 Actinidia chinensis HOM05D006803 ORTHO05D008552 1.2e-54 216.9 169 65.7
Hma1.2p1_0327F.1_g126650 Hydrangea macrophylla HOM05D006803 ORTHO05D008552 1.0e-53 213.8 163 65.6
Manes.14G019756 Manihot esculenta HOM05D006803 ORTHO05D008552 8.6e-53 210.7 172 64.0
Ciclev10006070m.g Citrus clementina HOM05D006803 ORTHO05D008552 5.5e-52 208.0 171 64.9
CDE04G2534 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 2.1e-51 206.1 164 64.0
Dinv28351 Davidia involucrata HOM05D006803 ORTHO05D008552 2.3e-50 202.6 173 61.3
vmacro06587 Vaccinium macrocarpon HOM05D006803 ORTHO05D008552 2.3e-50 202.6 167 62.9
PSO135G0887 Papaver somniferum HOM05D006803 ORTHO05D008552 5.2e-50 201.4 169 63.9
Atru.chr1.293 Acer truncatum HOM05D006803 ORTHO05D008552 8.9e-50 200.7 180 62.8
Cpa.g.sc3.33 Carica papaya HOM05D006803 ORTHO05D008552 8.9e-50 200.7 142 71.8
Potri.012G033700 Populus trichocarpa HOM05D006803 ORTHO05D008552 2.0e-49 199.5 173 63.6
GSVIVG01028745001 Vitis vinifera HOM05D006803 ORTHO05D008552 2.0e-49 199.5 165 62.4
Gohir.D08G108400 Gossypium hirsutum HOM05D006803 ORTHO05D008552 3.4e-49 198.7 137 71.5
Gorai.004G116000 Gossypium raimondii HOM05D006803 ORTHO05D008552 3.4e-49 198.7 137 71.5
Duzib084G0216 Durio zibethinus HOM05D006803 ORTHO05D008552 4.4e-49 198.4 137 71.5
Actinidia08612 Actinidia chinensis HOM05D006803 ORTHO05D008552 7.5e-49 197.6 170 62.4
HanXRQChr09g0253111 Helianthus annuus HOM05D006803 ORTHO05D008552 9.8e-49 197.2 153 65.4
Thecc.03G190700 Theobroma cacao HOM05D006803 ORTHO05D008552 9.8e-49 197.2 133 72.9
PSO384G2893 Papaver somniferum HOM05D006803 ORTHO05D008552 2.2e-48 196.1 165 63.6
CDE03G0029 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 3.7e-48 195.3 147 65.3
A10p10450 Brassica napus HOM05D006803 ORTHO05D008552 6.3e-48 194.5 158 65.8
MELO3C006968.2 Cucumis melo HOM05D006803 ORTHO05D008552 6.3e-48 194.5 154 64.9
SGA_v2.0_scaffold44G16771 Striga asiatica HOM05D006803 ORTHO05D008552 6.3e-48 194.5 171 64.9
AL8G27460 Arabidopsis lyrata HOM05D006803 ORTHO05D008552 8.3e-48 194.1 139 71.2
Hund11694 Selenicereus undatus HOM05D006803 ORTHO05D008552 8.3e-48 194.1 151 68.2
arahy.Tifrunner.gnm1.ann1.GHK1U8 Arachis hypogaea HOM05D006803 ORTHO05D008552 1.1e-47 193.7 160 63.8
arahy.Tifrunner.gnm1.ann1.V6YLC6 Arachis hypogaea HOM05D006803 ORTHO05D008552 1.1e-47 193.7 160 63.8
C09p42680 Brassica napus HOM05D006803 ORTHO05D008552 1.1e-47 193.7 159 66.0
BolC9t57144H Brassica oleracea HOM05D006803 ORTHO05D008552 1.1e-47 193.7 159 66.0
Lj3C914T13 Lonicera japonica HOM05D006803 ORTHO05D008552 1.1e-47 193.7 159 64.8
Sc19g0001080 Simmondsia chinensis HOM05D006803 ORTHO05D008552 1.1e-47 193.7 174 61.5
BraA10t43128Z Brassica rapa HOM05D006803 ORTHO05D008552 1.4e-47 193.4 159 65.4
ClCG05G008590 Citrullus lanatus HOM05D006803 ORTHO05D008552 1.8e-47 193.0 154 64.3
COL.COLO4_07418 Corchorus olitorius HOM05D006803 ORTHO05D008552 2.4e-47 192.6 167 61.7
Gohir.A08G097600 Gossypium hirsutum HOM05D006803 ORTHO05D008552 2.4e-47 192.6 137 70.8
Sp6g15120 Schrenkiella parvula HOM05D006803 ORTHO05D008552 2.4e-47 192.6 161 63.4
Carub.0008s1314 Capsella rubella HOM05D006803 ORTHO05D008552 5.4e-47 191.4 172 61.6
Aa31LG3G9190 Aethionema arabicum HOM05D006803 ORTHO05D008552 7.0e-47 191.0 171 61.4
EL10Ac3g05364 Beta vulgaris HOM05D006803 ORTHO05D008552 7.0e-47 191.0 161 64.0
AT5G52960 Arabidopsis thaliana HOM05D006803 ORTHO05D008552 9.2e-47 190.7 154 65.6
SalBow4G1856 Salvia bowleyana HOM05D006803 ORTHO05D008552 9.2e-47 190.7 172 61.6
SalBow4G1881 Salvia bowleyana HOM05D006803 ORTHO05D008552 9.2e-47 190.7 172 61.6
unitig_37.g11977 Utricularia gibba HOM05D000211 ORTHO05D002285 9.2e-47 190.7 130 70.8
Potri.016G123100 Populus trichocarpa HOM05D006803 ORTHO05D008552 1.2e-46 190.3 150 63.3
MD01G1213500 Malus domestica HOM05D006803 ORTHO05D008552 1.6e-46 189.9 169 58.6
Peaxi162Scf00904g00457 Petunia axillaris HOM05D006803 ORTHO05D008552 1.6e-46 189.9 167 61.1
Oeu044167.1 Olea europaea HOM05D006803 ORTHO05D008552 2.0e-46 189.5 167 61.1
RcHm_v2.0_Chr1g0379821 Rosa chinensis HOM05D006803 ORTHO05D008552 2.7e-46 189.1 135 67.4
Sed0009140 Sechium edule HOM05D006803 ORTHO05D008552 2.7e-46 189.1 124 73.4
PGSC0003DMG400009065 Solanum tuberosum HOM05D006803 ORTHO05D008552 2.7e-46 189.1 151 61.6
Duzib205G0804 Durio zibethinus HOM05D006803 ORTHO05D008552 3.5e-46 188.7 138 67.4
Ca_19336_v3 Cicer arietinum L. HOM05D006803 ORTHO05D008552 4.5e-46 188.3 179 57.5
Solyc03g007540.3 Solanum lycopersicum HOM05D006803 ORTHO05D008552 4.5e-46 188.3 148 62.2
PGR142G1334 Punica granatum HOM05D006803 ORTHO05D008552 5.9e-46 188.0 141 66.0
Sopen03g003500 Solanum pennellii HOM05D006803 ORTHO05D008552 5.9e-46 188.0 168 59.5
FAN03G2299 Fragaria x ananassa HOM05D006803 ORTHO05D008552 7.8e-46 187.6 135 67.4
DCAR_014527 Daucus carota HOM05D006803 ORTHO05D008552 1.0e-45 187.2 166 57.8
FAN10G2870 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.0e-45 187.2 135 66.7
THA.LOC104825126 Tarenaya hassleriana HOM05D006803 ORTHO05D008552 1.0e-45 187.2 167 58.7
Thhalv10014833m.g Eutrema salsugineum HOM05D006803 ORTHO05D008552 1.3e-45 186.8 152 65.8
Prupe.2G305500 Prunus persica HOM05D006803 ORTHO05D008552 1.3e-45 186.8 166 59.0
FAN01G0710 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.7e-45 186.4 113 75.2
FAN06G1048 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.7e-45 186.4 151 63.6
FAN06G4527 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.7e-45 186.4 151 63.6
Sabra15G0018100 Salix brachista HOM05D006803 ORTHO05D008552 1.7e-45 186.4 171 57.3
Migut.F00254 Erythranthe guttata HOM05D006803 ORTHO05D008552 2.3e-45 186.0 174 58.0
MD07G1283300 Malus domestica HOM05D006803 ORTHO05D008552 2.3e-45 186.0 109 75.2
Lsat_1_v5_gn_9_57340 Lactuca sativa HOM05D006803 ORTHO05D008552 2.9e-45 185.7 143 64.3
TPR.G36689 Trifolium pratense HOM05D006803 ORTHO05D008552 2.9e-45 185.7 160 60.6
FvH4_7g30800 Fragaria vesca HOM05D006803 ORTHO05D008552 3.8e-45 185.3 158 62.0
TWI14G0759 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 3.8e-45 185.3 165 60.0
Eucgr.K00316 Eucalyptus grandis HOM05D006803 ORTHO05D008552 6.6e-45 184.5 120 76.7
QL09p011586 Quercus lobata HOM05D006803 ORTHO05D008552 1.1e-44 183.7 127 70.9
CiPaw.05G259100 Carya illinoinensis HOM05D006803 ORTHO05D008552 1.5e-44 183.3 173 59.0
CAN.G108.11 Capsicum annuum HOM05D006803 ORTHO05D008552 1.9e-44 183.0 169 59.8
Sabra15G0020600 Salix brachista HOM05D006803 ORTHO05D008552 2.5e-44 182.6 171 56.1
ATR0721G182 Amborella trichopoda HOM05D006803 ORTHO05D008552 3.3e-44 182.2 156 60.3
CANSAT21G0672 Cannabis sativa HOM05D006803 ORTHO05D008552 4.3e-44 181.8 98 82.7
Sed0024434 Sechium edule HOM05D006803 ORTHO05D008552 4.3e-44 181.8 129 67.4
Glyma.09G125800 Glycine max HOM05D006803 ORTHO05D008552 9.5e-44 180.6 98 81.6
Lalb_Chr01g0009661 Lupinus albus HOM05D006803 ORTHO05D008552 1.2e-43 180.3 165 59.4
Medtr6g034205 Medicago truncatula HOM05D006803 ORTHO05D008552 1.2e-43 180.3 152 63.8
Psat1g097000 Pisum sativum HOM05D006803 ORTHO05D008552 1.2e-43 180.3 165 60.6
TWI39G0241 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 3.6e-43 178.7 134 64.9
Cc02_g02040 Coffea canephora HOM05D006803 ORTHO05D008552 4.7e-43 178.3 96 81.2
VMungo0464G0281 Vigna mungo HOM05D006803 ORTHO05D008552 4.7e-43 178.3 125 69.6
Lj2g0024519 Lotus japonicus HOM05D006803 ORTHO05D008552 8.0e-43 177.6 171 59.1
ECA232G4170 Erigeron canadensis HOM05D006803 ORTHO05D008552 1.0e-42 177.2 99 81.8
CSS0034587 Camellia sinensis var. sinensis HOM05D006803 ORTHO05D008552 4.0e-42 175.3 177 53.7
Phvul.004G101300 Phaseolus vulgaris HOM05D006803 ORTHO05D008552 5.2e-42 174.9 171 56.1
Rhsim03G0197200 Rhododendron simsii HOM05D006803 ORTHO05D008552 1.5e-41 173.3 175 55.4
Glyma.16G172700 Glycine max HOM05D006803 ORTHO05D008552 2.0e-41 172.9 98 77.6
Mapoly0006s0111 Marchantia polymorpha HOM05D006803 ORTHO05D008552 2.0e-41 172.9 117 66.7
Os05g0569200 Oryza sativa ssp. japonica HOM05D006803 ORTHO05D008552 1.3e-40 170.2 116 69.0
Zm00001eb296320 Zea mays HOM05D006803 ORTHO05D008552 1.7e-40 169.9 99 77.8
SEGI_13941 Sequoiadendron giganteum HOM05D006803 ORTHO05D008552 8.3e-40 167.5 110 72.7
Sabra12G0022800 Salix brachista HOM05D006803 ORTHO05D008552 7.0e-39 164.5 243 43.6
Pp3c4_26620 Physcomitrium patens HOM05D006803 ORTHO05D008552 3.5e-38 162.2 107 67.3
SMO169G0228 Selaginella moellendorffii HOM05D006803 ORTHO05D008552 1.0e-37 160.6 108 69.4
AagrBONN_evm.TU.Sc2ySwM_228.1351 Anthoceros agrestis HOM05D006803 ORTHO05D008552 1.3e-37 160.2 92 76.1
Pp3c26_8430 Physcomitrium patens HOM05D006803 ORTHO05D008552 3.1e-34 149.1 88 73.9
Nitab4.5_0001331g0090 Nicotiana tabacum HOM05D006803 ORTHO05D008552 8.3e-32 141.0 155 54.2
Nitab4.5_0000472g0050 Nicotiana tabacum HOM05D006803 ORTHO05D008552 1.1e-31 140.6 165 52.7
CARHR265930 Cardamine hirsuta HOM05D006803 ORTHO05D008552 4.6e-30 135.2 124 59.7
CBR_g9073 Chara braunii HOM05D006803 ORTHO05D008552 2.3e-29 132.9 110 57.3
BcaB08g35659 Brassica carinata HOM05D006803 ORTHO05D008552 1.9e-28 129.8 86 73.3
Haze_00093 Corylus avellana HOM05D006803 ORTHO05D008552 2.1e-27 126.3 146 52.1
HPP92_011456 Vanilla planifolia HOM05D006803 ORTHO05D008552 2.3e-26 122.9 65 84.6
Eucgr.L03342 Eucalyptus grandis HOM05D006803 ORTHO05D008552 1.4e-23 113.6 72 72.2
Oeu059677.1 Olea europaea HOM05D006803 ORTHO05D008552 9.2e-23 110.9 73 65.8
Oeu008094.1 Olea europaea HOM05D006803 ORTHO05D008552 2.8e-19 99.4 122 45.1
Oeu059693.1 Olea europaea HOM05D006803 ORTHO05D008552 2.0e-17 93.2 100 47.0
Thecc.03G190900 Theobroma cacao HOM05D006803 ORTHO05D008552 3.3e-12 75.9 36 97.2
RcHm_v2.0_Chr1g0379761 Rosa chinensis HOM05D006803 ORTHO05D008552 3.6e-11 72.4 35 91.4


User provided reference genes

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