Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00195 Aquilegia oxysepala HOM05D005438 ORTHO05D006744 1.0e-205 719.9 379 100.0
Nn1g01673 Nelumbo nucifera HOM05D005438 ORTHO05D006744 2.9e-120 436.0 404 61.1
TAR374G1319 Trochodendron aralioides HOM05D005438 ORTHO05D006744 4.2e-119 432.2 378 65.6
CiPaw.11G129800 Carya illinoinensis HOM05D005438 ORTHO05D006744 4.3e-116 422.2 381 61.9
Atru.chr9.2115 Acer truncatum HOM05D005438 ORTHO05D006744 7.4e-116 421.4 384 62.5
Duzib084G0802 Durio zibethinus HOM05D005438 ORTHO05D006744 9.6e-116 421.0 379 60.7
Thecc.03G286500 Theobroma cacao HOM05D005438 ORTHO05D006744 3.7e-115 419.1 379 61.7
Gohir.D03G078500 Gossypium hirsutum HOM05D005438 ORTHO05D006744 4.8e-115 418.7 379 60.9
Gohir.A02G105300 Gossypium hirsutum HOM05D005438 ORTHO05D006744 1.1e-114 417.5 379 60.7
Gorai.003G085600 Gossypium raimondii HOM05D005438 ORTHO05D006744 4.0e-114 415.6 380 60.8
GSVIVG01019417001 Vitis vinifera HOM05D005438 ORTHO05D006744 3.4e-113 412.5 378 59.0
Dinv37597 Davidia involucrata HOM05D005438 ORTHO05D006744 4.9e-112 408.7 380 62.4
Rhsim02G0235700 Rhododendron simsii HOM05D005438 ORTHO05D006744 4.9e-112 408.7 380 61.8
COL.COLO4_08362 Corchorus olitorius HOM05D005438 ORTHO05D006744 1.1e-111 407.5 379 59.6
Prupe.5G106500 Prunus persica HOM05D005438 ORTHO05D006744 1.9e-111 406.8 378 60.3
TWI60G1446 Tripterygium wilfordii HOM05D005438 ORTHO05D006744 4.2e-111 405.6 386 59.6
Actinidia10609 Actinidia chinensis HOM05D005438 ORTHO05D006744 9.3e-111 404.4 384 60.7
QL12p031793 Quercus lobata HOM05D005438 ORTHO05D006744 4.6e-110 402.1 411 56.0
Duzib205G0010 Durio zibethinus HOM05D005438 ORTHO05D006744 7.9e-110 401.4 377 58.9
Ciclev10020644m.g Citrus clementina HOM05D005438 ORTHO05D006744 1.0e-109 401.0 385 59.5
Eucgr.L02379 Eucalyptus grandis HOM05D005438 ORTHO05D006744 1.3e-107 394.0 381 60.1
Potri.003G132600 Populus trichocarpa HOM05D005438 ORTHO05D006744 2.8e-107 392.9 421 54.4
MD14G1111900 Malus domestica HOM05D005438 ORTHO05D006744 4.8e-107 392.1 383 58.7
Eucgr.D01812 Eucalyptus grandis HOM05D005438 ORTHO05D006744 8.2e-107 391.3 381 59.8
CsaV3_5G002390 Cucumis sativus L. HOM05D005438 ORTHO05D006744 1.4e-106 390.6 385 58.4
PGR031G2565 Punica granatum HOM05D005438 ORTHO05D006744 1.8e-106 390.2 380 61.3
MELO3C005715.2 Cucumis melo HOM05D005438 ORTHO05D006744 3.1e-106 389.4 382 58.1
Sabra03G0095000 Salix brachista HOM05D005438 ORTHO05D006744 5.3e-106 388.7 420 53.8
Ca_10950_v3 Cicer arietinum L. HOM05D005438 ORTHO05D006744 9.0e-106 387.9 379 58.6
FAN18G2027 Fragaria x ananassa HOM05D005438 ORTHO05D006744 1.2e-105 387.5 379 59.1
FvH4_5g03190 Fragaria vesca HOM05D005438 ORTHO05D006744 1.5e-105 387.1 379 59.1
RcHm_v2.0_Chr7g0196591 Rosa chinensis HOM05D005438 ORTHO05D006744 2.6e-105 386.3 378 59.0
FAN13G0364 Fragaria x ananassa HOM05D005438 ORTHO05D006744 3.4e-105 386.0 379 58.6
Gorai.008G250200 Gossypium raimondii HOM05D005438 ORTHO05D006744 7.6e-105 384.8 380 59.2
Gohir.D12G233900 Gossypium hirsutum HOM05D005438 ORTHO05D006744 1.0e-104 384.4 382 58.4
Atru.BG.199.p Acer truncatum HOM05D005438 ORTHO05D006744 2.9e-104 382.9 384 57.6
FAN08G1515 Fragaria x ananassa HOM05D005438 ORTHO05D006744 2.9e-104 382.9 379 58.3
PSO478G3903 Papaver somniferum HOM05D005438 ORTHO05D006744 2.9e-104 382.9 402 58.7
Sed0027839 Sechium edule HOM05D005438 ORTHO05D006744 2.9e-104 382.9 388 57.7
ECA233G5263 Erigeron canadensis HOM05D005438 ORTHO05D006744 3.8e-104 382.5 387 57.9
Lsat_1_v5_gn_3_8761 Lactuca sativa HOM05D005438 ORTHO05D006744 3.8e-104 382.5 377 58.9
vmacro11410 Vaccinium macrocarpon HOM05D005438 ORTHO05D006744 3.8e-104 382.5 378 58.7
MBI11_g09068_MAGBIO Magnolia biondii HOM05D005438 ORTHO05D006744 6.5e-104 381.7 371 59.0
PSO017G3503 Papaver somniferum HOM05D005438 ORTHO05D006744 8.5e-104 381.3 398 58.0
VMungo0251G0328 Vigna mungo HOM05D005438 ORTHO05D006744 8.5e-104 381.3 380 57.1
CANSAT21G0041 Cannabis sativa HOM05D005438 ORTHO05D006744 1.1e-103 380.9 378 58.2
PSO266G0069 Papaver somniferum HOM05D005438 ORTHO05D006744 1.4e-103 380.6 402 58.7
Phvul.002G293100 Phaseolus vulgaris HOM05D005438 ORTHO05D006744 9.3e-103 377.9 381 57.7
Glyma.08G018100 Glycine max HOM05D005438 ORTHO05D006744 1.2e-102 377.5 380 57.9
Medtr8g098940 Medicago truncatula HOM05D005438 ORTHO05D006744 1.2e-102 377.5 384 58.1
FAN04G0810 Fragaria x ananassa HOM05D005438 ORTHO05D006744 2.1e-102 376.7 380 58.2
PGSC0003DMG400012320 Solanum tuberosum HOM05D005438 ORTHO05D006744 2.7e-102 376.3 378 56.9
CSS0046697 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 6.1e-102 375.2 385 57.4
HanXRQChr02g0049721 Helianthus annuus HOM05D005438 ORTHO05D006744 1.0e-101 374.4 388 56.7
arahy.Tifrunner.gnm1.ann1.I29YTG Arachis hypogaea HOM05D005438 ORTHO05D006744 5.1e-101 372.1 380 56.6
Lj4g0011941 Lotus japonicus HOM05D005438 ORTHO05D006744 6.7e-101 371.7 381 57.0
Glyma.05G211800 Glycine max HOM05D005438 ORTHO05D006744 8.8e-101 371.3 379 57.0
TPR.G12953 Trifolium pratense HOM05D005438 ORTHO05D006744 1.1e-100 370.9 380 57.6
arahy.Tifrunner.gnm1.ann1.Y7QUAU Arachis hypogaea HOM05D005438 ORTHO05D006744 1.9e-100 370.2 380 56.8
CAN.G532.38 Capsicum annuum HOM05D005438 ORTHO05D006744 1.9e-100 370.2 378 56.6
Psat7g029680 Pisum sativum HOM05D005438 ORTHO05D006744 5.7e-100 368.6 380 56.8
Manes.01G057900 Manihot esculenta HOM05D005438 ORTHO05D006744 4.8e-99 365.5 414 54.6
THA.LOC104817794 Tarenaya hassleriana HOM05D005438 ORTHO05D006744 8.2e-99 364.8 393 55.2
Peaxi162Scf00074g01737 Petunia axillaris HOM05D005438 ORTHO05D006744 3.1e-98 362.8 380 56.6
Lalb_Chr05g0224491 Lupinus albus HOM05D005438 ORTHO05D006744 5.3e-98 362.1 380 54.7
Nitab4.5_0007906g0070 Nicotiana tabacum HOM05D005438 ORTHO05D006744 9.1e-98 361.3 378 55.6
Lj2C178T12 Lonicera japonica HOM05D005438 ORTHO05D006744 1.2e-97 360.9 387 55.8
Sopen08g029890 Solanum pennellii HOM05D005438 ORTHO05D006744 2.6e-97 359.8 378 55.8
Migut.J01399 Erythranthe guttata HOM05D005438 ORTHO05D006744 3.4e-97 359.4 380 56.1
Solyc08g081580.4 Solanum lycopersicum HOM05D005438 ORTHO05D006744 5.9e-97 358.6 378 55.3
Nitab4.5_0003015g0090 Nicotiana tabacum HOM05D005438 ORTHO05D006744 2.9e-96 356.3 378 55.0
Hund11433 Selenicereus undatus HOM05D005438 ORTHO05D006744 3.8e-96 355.9 385 54.3
DCAR_004611 Daucus carota HOM05D005438 ORTHO05D006744 5.0e-96 355.5 380 56.1
ClCG01G002320 Citrullus lanatus HOM05D005438 ORTHO05D006744 3.2e-95 352.8 382 53.7
Cc08_g15250 Coffea canephora HOM05D005438 ORTHO05D006744 4.2e-95 352.4 384 53.9
AUR62019752 Chenopodium quinoa HOM05D005438 ORTHO05D006744 2.7e-94 349.7 380 52.9
AUR62010754 Chenopodium quinoa HOM05D005438 ORTHO05D006744 8.8e-93 344.7 380 52.6
Zm00001eb001860 Zea mays HOM05D005438 ORTHO05D006744 1.3e-91 340.9 401 52.6
Aa31LG2G1070 Aethionema arabicum HOM05D005438 ORTHO05D006744 3.7e-91 339.3 396 54.0
ATR0661G541 Amborella trichopoda HOM05D005438 ORTHO05D006744 1.4e-90 337.4 413 51.3
Gohir.A12G233400 Gossypium hirsutum HOM05D005438 ORTHO05D006744 3.1e-90 336.3 379 53.8
SGA_v2.0_scaffold173G39139 Striga asiatica HOM05D005438 ORTHO05D006744 3.1e-90 336.3 409 51.6
Migut.A00720 Erythranthe guttata HOM05D005438 ORTHO05D006744 4.1e-90 335.9 384 54.4
CDE04G0809 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 3.4e-89 332.8 376 54.5
AT1G63980 Arabidopsis thaliana HOM05D005438 ORTHO05D006744 5.9e-89 332.0 411 50.4
Thhalv10023525m.g Eutrema salsugineum HOM05D005438 ORTHO05D006744 1.0e-88 331.3 397 51.9
Carub.0002s0086 Capsella rubella HOM05D005438 ORTHO05D006744 2.2e-88 330.1 408 52.0
AL2G11130 Arabidopsis lyrata HOM05D005438 ORTHO05D006744 2.9e-88 329.7 402 51.7
EL10Ac5g12834 Beta vulgaris HOM05D005438 ORTHO05D006744 1.1e-87 327.8 360 52.5
BcaB07g31532 Brassica carinata HOM05D005438 ORTHO05D006744 1.4e-87 327.4 417 50.4
Ah.12g051920 Amaranthus hybridus HOM05D005438 ORTHO05D006744 3.2e-87 326.2 392 50.3
Os03g0125300 Oryza sativa ssp. japonica HOM05D005438 ORTHO05D006744 5.5e-87 325.5 404 50.2
MD06G1091000 Malus domestica HOM05D005438 ORTHO05D006744 7.2e-87 325.1 380 51.1
BcaB07g31422 Brassica carinata HOM05D005438 ORTHO05D006744 2.1e-86 323.6 414 50.2
BcaC04g22661 Brassica carinata HOM05D005438 ORTHO05D006744 2.1e-86 323.6 412 50.2
CARHR047000 Cardamine hirsuta HOM05D005438 ORTHO05D006744 2.7e-86 323.2 400 50.5
A09p14060 Brassica napus HOM05D005438 ORTHO05D006744 4.7e-86 322.4 408 50.5
A09p15160 Brassica napus HOM05D005438 ORTHO05D006744 1.1e-84 317.8 418 49.3
C09p18360 Brassica napus HOM05D005438 ORTHO05D006744 2.0e-84 317.0 419 49.2
HPP92_021018 Vanilla planifolia HOM05D005438 ORTHO05D006744 2.0e-84 317.0 379 51.7
Sp2g00710 Schrenkiella parvula HOM05D005438 ORTHO05D006744 2.2e-83 313.5 420 48.6
C09p16950 Brassica napus HOM05D005438 ORTHO05D006744 1.1e-82 311.2 414 50.0
BraA09t37053Z Brassica rapa HOM05D005438 ORTHO05D006744 1.1e-82 311.2 415 49.6
BraA09t37158Z Brassica rapa HOM05D005438 ORTHO05D006744 7.0e-82 308.5 422 49.3
BolC9t54592H Brassica oleracea HOM05D005438 ORTHO05D006744 9.1e-82 308.1 414 49.3
HanXRQChr17g0533211 Helianthus annuus HOM05D005438 ORTHO05D006744 1.2e-81 307.8 366 51.6
BolC9t54729H Brassica oleracea HOM05D005438 ORTHO05D006744 1.7e-80 303.9 420 48.3
CSS0015982 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 1.9e-79 300.4 380 51.3
SEGI_20773 Sequoiadendron giganteum HOM05D005438 ORTHO05D006744 1.2e-78 297.7 439 46.7
Sc01g0009850 Simmondsia chinensis HOM05D005438 ORTHO05D006744 1.4e-77 294.3 333 50.8
unitig_32.g10979 Utricularia gibba HOM05D005438 ORTHO05D006744 1.4e-69 267.7 342 49.7
Haze_08758 Corylus avellana HOM05D005438 ORTHO05D006744 2.7e-65 253.4 323 50.2
SMO134G0098 Selaginella moellendorffii HOM05D005438 ORTHO05D006744 2.5e-55 220.3 370 41.4
Pp3c2_28530 Physcomitrium patens HOM05D005438 ORTHO05D006744 3.4e-52 209.9 413 40.0
Mapoly0090s0083 Marchantia polymorpha HOM05D005438 ORTHO05D006744 9.8e-52 208.4 484 35.1
Lsat_1_v5_gn_1_49360 Lactuca sativa HOM05D005438 ORTHO05D006744 7.3e-47 192.2 192 57.8
Lsat_1_v5_gn_5_103140 Lactuca sativa HOM05D005438 ORTHO05D006744 7.3e-47 192.2 192 57.8
Lsat_1_v5_gn_9_38321 Lactuca sativa HOM05D005438 ORTHO05D006744 7.3e-47 192.2 192 57.8
AagrBONN_evm.TU.Sc2ySwM_344.4712 Anthoceros agrestis HOM05D005438 ORTHO05D006744 4.9e-43 179.5 537 31.8
BcaC04g22519 Brassica carinata HOM05D005438 ORTHO05D006744 4.1e-42 176.4 281 42.7
SHI31900 Sapria himalayana HOM05D005438 ORTHO05D006744 7.8e-41 172.2 298 40.3
CSS0040427 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 1.6e-38 164.5 149 63.1
Cpa.g.sc631.4 Carica papaya HOM05D005438 ORTHO05D006744 4.4e-36 156.4 149 60.4
CDE12G0222 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 5.8e-36 156.0 150 60.7
Pp3c7_27020 Physcomitrium patens HOM05D005438 ORTHO05D006744 3.2e-34 150.2 409 31.1
Actinidia28345 Actinidia chinensis HOM05D005438 ORTHO05D006744 2.3e-32 144.1 380 36.1
Cpa.g.c39085 Carica papaya HOM05D005438 ORTHO05D006744 1.4e-29 134.8 150 55.3
CBR_g35011 Chara braunii HOM05D005438 ORTHO05D006744 2.3e-24 117.5 314 32.8
BcaNung05361 Brassica carinata HOM05D005438 ORTHO05D006744 3.9e-24 116.7 198 42.4
ATR0661G444 Amborella trichopoda HOM05D005438 ORTHO05D006744 4.7e-22 109.8 177 44.6
Cre07.g347300 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D021338 1.4e-18 98.2 377 28.4
Cre07.g347400 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 1.4e-18 98.2 377 28.4
HanXRQChr16g0521071 Helianthus annuus HOM05D005438 ORTHO05D006744 2.9e-11 73.9 42 78.6
ECA246G3112 Erigeron canadensis HOM05D005438 ORTHO05D006744 6.4e-11 72.8 111 44.1
Cre01.g054000 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 3.9e-08 63.5 68 48.5
ClCG01G002340 Citrullus lanatus HOM05D005438 ORTHO05D006744 7.4e-07 59.3 113 36.3
AagrBONN_evm.TU.Sc2ySwM_344.4702 Anthoceros agrestis HOM05D005438 ORTHO05D006744 4.8e-06 56.6 129 34.1


User provided reference genes

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