Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00168 Aquilegia oxysepala HOM05D019791 ORTHO05D021351 8.2e-212 740.3 436 100.0
Aqoxy1G02020_Aqoxy1G02021 Aquilegia oxysepala HOM05D005129 ORTHO05D005585 3.8e-148 528.9 337 81.9
Aqoxy7G00172 Aquilegia oxysepala HOM05D019791 ORTHO05D021351 1.2e-72 278.1 135 100.0
Aqoxy88s006 Aquilegia oxysepala HOM05D019791 ORTHO05D021351 1.2e-72 278.1 135 100.0
TAR626G1389 Trochodendron aralioides HOM05D005129 ORTHO05D005585 4.1e-54 216.5 343 42.9
Aqoxy7G00173 Aquilegia oxysepala HOM05D019791 ORTHO05D021351 1.4e-41 174.9 152 100.0
Aqoxy88s002 Aquilegia oxysepala HOM05D019791 ORTHO05D021351 1.4e-41 174.9 152 100.0
Aqoxy88s007 Aquilegia oxysepala HOM05D019791 ORTHO05D021351 1.4e-41 174.9 152 100.0
PSO541G3520 Papaver somniferum HOM05D005129 ORTHO05D005585 6.0e-37 159.5 340 37.6
MBI18_g10016_MAGBIO Magnolia biondii HOM05D005129 ORTHO05D005585 4.3e-35 153.3 367 33.5
Nn1g08322 Nelumbo nucifera HOM05D005129 ORTHO05D005585 2.9e-31 140.6 265 38.5
Potri.001G463700 Populus trichocarpa HOM05D005129 ORTHO05D005585 6.0e-29 132.9 417 40.8
TWI63G1468 Tripterygium wilfordii HOM05D005129 ORTHO05D005585 5.6e-27 126.3 309 34.3
QL05p063822 Quercus lobata HOM05D005129 ORTHO05D005585 1.6e-26 124.8 319 33.2
Ciclev10014031m.g Citrus clementina HOM05D005129 ORTHO05D005585 4.8e-26 123.2 326 34.0
Sabra11G0141700 Salix brachista HOM05D005129 ORTHO05D005585 4.0e-25 120.2 410 29.3
Cpa.g.sc166.48 Carica papaya HOM05D005129 ORTHO05D005585 8.4e-23 112.5 317 30.3
CANSAT35G1118 Cannabis sativa HOM05D005129 ORTHO05D005585 1.2e-21 108.6 298 32.6
Gorai.009G117400 Gossypium raimondii HOM05D005129 ORTHO05D005585 1.2e-21 108.6 318 32.7
Gohir.A05G112850 Gossypium hirsutum HOM05D005129 ORTHO05D005585 4.6e-21 106.7 318 32.4
CSS0016153 Camellia sinensis var. sinensis HOM05D005129 ORTHO05D005585 1.8e-20 104.8 397 38.5
Potri.011G161901 Populus trichocarpa HOM05D005129 ORTHO05D005585 1.8e-20 104.8 404 33.9
Lj1C1160T1 Lonicera japonica HOM05D005129 ORTHO05D005585 3.9e-20 103.6 310 33.5
Haze_05902 Corylus avellana HOM05D005129 ORTHO05D005585 5.1e-20 103.2 325 32.9
FvH4_3g10781 Fragaria vesca HOM05D005129 ORTHO05D005585 6.7e-20 102.8 284 35.2
PGR083G2529 Punica granatum HOM05D005129 ORTHO05D005585 1.1e-19 102.1 286 34.6
Thecc.06G015200 Theobroma cacao HOM05D005129 ORTHO05D005585 1.5e-19 101.7 284 31.7
Cfa000799 Carpinus fangiana HOM05D005129 ORTHO05D005585 1.9e-19 101.3 323 32.5
ClCG03G008270 Citrullus lanatus HOM05D005129 ORTHO05D005585 2.5e-19 100.9 327 31.5
FAN11G1468 Fragaria x ananassa HOM05D005129 ORTHO05D005585 1.3e-18 98.6 324 32.7
Peaxi162Scf01909g00118 Petunia axillaris HOM05D005129 ORTHO05D005585 4.8e-18 96.7 251 34.3
Cc09_g07500 Coffea canephora HOM05D005129 ORTHO05D005585 1.1e-17 95.5 306 30.1
Nitab4.5_0000076g0130 Nicotiana tabacum HOM05D005129 ORTHO05D005585 4.1e-17 93.6 226 35.4
vmacro03361 Vaccinium macrocarpon HOM05D005129 ORTHO05D005585 4.1e-17 93.6 321 31.5
Gorai.011G007900 Gossypium raimondii HOM05D005129 ORTHO05D005585 9.0e-17 92.4 320 30.0
MELO3C002837.2 Cucumis melo HOM05D005129 ORTHO05D005585 2.6e-16 90.9 336 29.8
Gohir.D10G007200 Gossypium hirsutum HOM05D005129 ORTHO05D005585 3.4e-16 90.5 322 29.5
CsaV3_1G037120 Cucumis sativus L. HOM05D005129 ORTHO05D005585 1.0e-15 89.0 321 30.8
AT2G34780 Arabidopsis thaliana HOM05D005129 ORTHO05D005585 3.8e-15 87.0 329 27.1
Gohir.A10G007300 Gossypium hirsutum HOM05D005129 ORTHO05D005585 1.1e-14 85.5 322 28.6
MD05G1268800 Malus domestica HOM05D005129 ORTHO05D005585 1.1e-14 85.5 310 30.0
Sopen02g006450 Solanum pennellii HOM05D005129 ORTHO05D005585 1.4e-14 85.1 262 31.7
PSO541G6300 Papaver somniferum HOM05D005129 ORTHO05D005585 5.5e-14 83.2 102 49.0
FAN25G0785 Fragaria x ananassa HOM05D005129 ORTHO05D005585 7.2e-14 82.8 274 33.9
FAN16G1113 Fragaria x ananassa HOM05D005129 ORTHO05D005585 9.3e-14 82.4 259 32.8
Dinv27170 Davidia involucrata HOM05D005129 ORTHO05D005585 1.2e-13 82.0 335 27.5
arahy.Tifrunner.gnm1.ann1.LUZ6WJ Arachis hypogaea HOM05D005129 ORTHO05D005585 1.6e-13 81.6 309 29.4
Glyma.02G281900 Glycine max HOM05D005129 ORTHO05D005585 1.6e-13 81.6 211 32.7
PSO675G3866 Papaver somniferum HOM05D026995 ORTHO05D005585 2.7e-13 80.9 103 46.6
PSO675G2011 Papaver somniferum HOM05D026995 ORTHO05D005585 3.5e-13 80.5 71 62.0
ATR0763G237 Amborella trichopoda HOM05D005129 ORTHO05D005585 7.9e-13 79.3 176 35.8
THA.LOC104812690 Tarenaya hassleriana HOM05D005129 ORTHO05D005585 7.9e-13 79.3 325 27.1
arahy.Tifrunner.gnm1.ann1.40GDTE Arachis hypogaea HOM05D005129 ORTHO05D005585 1.0e-12 79.0 253 30.0
GSVIVG01035592001 Vitis vinifera HOM05D005129 ORTHO05D005585 2.3e-12 77.8 172 36.0
AL4G30770 Arabidopsis lyrata HOM05D005129 ORTHO05D005585 3.0e-12 77.4 317 27.8
FAN21G1521 Fragaria x ananassa HOM05D005129 ORTHO05D005585 3.0e-12 77.4 262 31.3
FAN25G2195 Fragaria x ananassa HOM05D005129 ORTHO05D005585 3.9e-12 77.0 261 31.8
PSO541G0381 Papaver somniferum HOM05D026995 ORTHO05D005585 3.9e-12 77.0 102 47.1
Migut.M00948 Erythranthe guttata HOM05D005129 ORTHO05D005585 5.1e-12 76.6 334 28.4
Manes.06G058900 Manihot esculenta HOM05D005129 ORTHO05D005585 5.1e-12 76.6 403 27.0
EL10Ac3g05106 Beta vulgaris HOM05D005129 ORTHO05D005585 6.7e-12 76.3 316 28.2
Glyma.14G032500 Glycine max HOM05D005129 ORTHO05D005585 1.5e-11 75.1 211 30.3
Rhsim06G0213800 Rhododendron simsii HOM05D005129 ORTHO05D005585 1.5e-11 75.1 330 27.9
Sed0027997 Sechium edule HOM05D005129 ORTHO05D005585 3.3e-11 73.9 325 27.1
DCAR_003834 Daucus carota HOM05D005129 ORTHO05D005585 9.7e-11 72.4 293 30.7
Eucgr.D00092 Eucalyptus grandis HOM05D005129 ORTHO05D005585 2.2e-10 71.2 289 29.4
Nitab4.5_0002094g0030 Nicotiana tabacum HOM05D005129 ORTHO05D005585 2.2e-10 71.2 208 32.7
Medtr2g031380 Medicago truncatula HOM05D005129 ORTHO05D005585 2.8e-10 70.9 343 27.1
BolC4t27871H Brassica oleracea HOM05D005129 ORTHO05D005585 3.7e-10 70.5 338 26.6
SGA_v2.0_scaffold333G49012 Striga asiatica HOM05D005129 ORTHO05D005585 8.2e-10 69.3 299 27.4
Psat1g165880 Pisum sativum HOM05D005129 ORTHO05D005585 1.8e-09 68.2 234 30.8
SalBow8G1057 Salvia bowleyana HOM05D005129 ORTHO05D005585 1.8e-09 68.2 259 28.6
HPP92_022552 Vanilla planifolia HOM05D005129 ORTHO05D005585 2.4e-09 67.8 215 33.0
Prupe.4G095800 Prunus persica HOM05D005129 ORTHO05D005585 3.1e-09 67.4 256 30.5
AUR62005921 Chenopodium quinoa HOM05D005129 ORTHO05D005585 5.3e-09 66.6 333 27.0
MELO3C033745.2 Cucumis melo HOM05D005129 ORTHO05D005585 5.3e-09 66.6 193 34.2
Sc19g0000270 Simmondsia chinensis HOM05D005129 ORTHO05D005585 5.3e-09 66.6 227 33.9
AUR62028142 Chenopodium quinoa HOM05D005129 ORTHO05D005585 6.9e-09 66.2 298 27.2
Rhsim03G0093400 Rhododendron simsii HOM05D005129 ORTHO05D005585 6.9e-09 66.2 320 26.6
CAN.G39.32 Capsicum annuum HOM05D005129 ORTHO05D000007 1.5e-08 65.1 230 29.1
Sp4g17070 Schrenkiella parvula HOM05D005129 ORTHO05D005585 2.0e-08 64.7 314 25.2
Hund21086 Selenicereus undatus HOM05D005129 ORTHO05D005585 7.7e-08 62.8 304 27.3
TPR.G22269 Trifolium pratense HOM05D005129 ORTHO05D005585 7.7e-08 62.8 344 25.3
BraA05t20033Z Brassica rapa HOM05D005129 ORTHO05D005585 1.0e-07 62.4 316 24.4
PSO541G4161 Papaver somniferum HOM05D026995 ORTHO05D005585 1.0e-07 62.4 61 57.4
C04p13980 Brassica napus HOM05D005129 ORTHO05D005585 1.3e-07 62.0 318 25.2
BolC4t22987H Brassica oleracea HOM05D005129 ORTHO05D005585 1.3e-07 62.0 318 25.2
Ca_00871_v3 Cicer arietinum L. HOM05D005129 ORTHO05D005585 1.7e-07 61.6 177 33.3
CDE06G2236 Ceratophyllum demersum HOM05D005129 ORTHO05D005585 3.8e-07 60.5 308 27.6
BcaC02g11559 Brassica carinata HOM05D005129 ORTHO05D005585 6.5e-07 59.7 318 25.5
BcaB06g28799 Brassica carinata HOM05D005129 ORTHO05D005585 8.5e-07 59.3 260 28.5
Ah.13g071200 Amaranthus hybridus HOM05D005129 ORTHO05D005585 1.4e-06 58.5 308 26.9
VMungo0647G0154 Vigna mungo HOM05D005129 ORTHO05D005585 3.2e-06 57.4 147 32.7
RcHm_v2.0_Chr5g0017511 Rosa chinensis HOM05D005129 ORTHO05D005585 5.5e-06 56.6 278 27.3


User provided reference genes

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