Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00166 Aquilegia oxysepala HOM05D005129 ORTHO05D005585 3.5e-239 831.2 425 100.0
Aqoxy88s004 Aquilegia oxysepala HOM05D005129 ORTHO05D005585 3.5e-239 831.2 425 100.0
Aqoxy7G00170 Aquilegia oxysepala HOM05D005129 ORTHO05D005585 2.9e-238 828.2 425 99.8
Aqoxy1G02020_Aqoxy1G02021 Aquilegia oxysepala HOM05D005129 ORTHO05D005585 9.6e-181 637.1 424 80.4
TAR626G1389 Trochodendron aralioides HOM05D005129 ORTHO05D005585 6.2e-87 325.5 439 45.3
TAR633G0821 Trochodendron aralioides HOM05D005129 ORTHO05D005585 7.8e-82 308.5 447 44.3
MBI18_g10016_MAGBIO Magnolia biondii HOM05D005129 ORTHO05D005585 1.6e-74 284.3 451 39.5
PSO541G3520 Papaver somniferum HOM05D005129 ORTHO05D005585 1.6e-74 284.3 420 41.7
Nn1g08322 Nelumbo nucifera HOM05D005129 ORTHO05D005585 3.5e-74 283.1 437 41.2
GSVIVG01035591001 Vitis vinifera HOM05D005129 ORTHO05D005585 8.7e-73 278.5 427 40.0
QL05p063822 Quercus lobata HOM05D005129 ORTHO05D005585 1.2e-71 274.6 446 39.9
Cfa000799 Carpinus fangiana HOM05D005129 ORTHO05D005585 1.1e-70 271.6 446 39.5
Atru.chr3.3029 Acer truncatum HOM05D005129 ORTHO05D005585 2.4e-70 270.4 413 40.9
Haze_05902 Corylus avellana HOM05D005129 ORTHO05D005585 2.4e-70 270.4 446 39.5
CiPaw.09G143100 Carya illinoinensis HOM05D005129 ORTHO05D005585 1.3e-68 264.6 442 38.7
CSS0016153 Camellia sinensis var. sinensis HOM05D005129 ORTHO05D005585 1.6e-66 257.7 436 38.5
Ciclev10014031m.g Citrus clementina HOM05D005129 ORTHO05D005585 1.3e-65 254.6 416 38.9
Potri.001G463700 Populus trichocarpa HOM05D005129 ORTHO05D005585 1.7e-65 254.2 427 38.2
Potri.011G161901 Populus trichocarpa HOM05D005129 ORTHO05D005585 1.9e-64 250.8 442 37.1
Thecc.06G015200 Theobroma cacao HOM05D005129 ORTHO05D005585 4.8e-63 246.1 445 38.0
Cpa.g.sc166.48 Carica papaya HOM05D005129 ORTHO05D005585 1.4e-62 244.6 425 37.6
Sabra11G0141700 Salix brachista HOM05D005129 ORTHO05D005585 1.5e-61 241.1 455 34.9
Gohir.A10G007300 Gossypium hirsutum HOM05D005129 ORTHO05D005585 2.9e-60 236.9 428 37.6
MD05G1268800 Malus domestica HOM05D005129 ORTHO05D005585 2.9e-60 236.9 380 40.3
RcHm_v2.0_Chr5g0017511 Rosa chinensis HOM05D005129 ORTHO05D005585 6.4e-60 235.7 392 40.8
Gohir.D10G007200 Gossypium hirsutum HOM05D005129 ORTHO05D005585 1.4e-59 234.6 414 38.4
Prupe.4G095800 Prunus persica HOM05D005129 ORTHO05D005585 1.9e-59 234.2 444 37.4
Gorai.011G007900 Gossypium raimondii HOM05D005129 ORTHO05D005585 3.2e-59 233.4 414 38.2
CANSAT35G1118 Cannabis sativa HOM05D005129 ORTHO05D005585 5.4e-59 232.6 380 39.2
MD10G1247500 Malus domestica HOM05D005129 ORTHO05D005585 7.1e-59 232.3 380 40.3
Rhsim06G0213800 Rhododendron simsii HOM05D005129 ORTHO05D005585 2.1e-58 230.7 433 36.7
ATR0763G237 Amborella trichopoda HOM05D005129 ORTHO05D005585 4.3e-56 223.0 425 36.2
Gorai.009G117400 Gossypium raimondii HOM05D005129 ORTHO05D005585 5.6e-56 222.6 424 37.0
Manes.06G058900 Manihot esculenta HOM05D005129 ORTHO05D005585 5.6e-56 222.6 431 36.2
Gohir.D05G113300 Gossypium hirsutum HOM05D005129 ORTHO05D005585 9.6e-56 221.9 423 36.2
Dinv27170 Davidia involucrata HOM05D005129 ORTHO05D005585 1.6e-55 221.1 259 47.5
Gohir.A05G112850 Gossypium hirsutum HOM05D005129 ORTHO05D005585 8.1e-55 218.8 420 36.9
Lj1C1160T1 Lonicera japonica HOM05D005129 ORTHO05D005585 6.9e-54 215.7 376 38.8
FAN11G1468 Fragaria x ananassa HOM05D005129 ORTHO05D005585 1.5e-53 214.5 394 39.3
Sc19g0000270 Simmondsia chinensis HOM05D005129 ORTHO05D005585 1.5e-53 214.5 420 34.0
CDE06G2236 Ceratophyllum demersum HOM05D005129 ORTHO05D005585 2.0e-53 214.2 413 36.1
FAN21G1521 Fragaria x ananassa HOM05D005129 ORTHO05D005585 2.6e-53 213.8 391 38.1
AUR62028142 Chenopodium quinoa HOM05D005129 ORTHO05D005585 3.4e-53 213.4 393 34.1
Rhsim03G0093400 Rhododendron simsii HOM05D005129 ORTHO05D005585 3.4e-53 213.4 443 34.5
FAN16G1113 Fragaria x ananassa HOM05D005129 ORTHO05D005585 4.5e-53 213.0 391 37.6
FAN25G2195 Fragaria x ananassa HOM05D005129 ORTHO05D005585 4.5e-53 213.0 391 37.9
AUR62005921 Chenopodium quinoa HOM05D005129 ORTHO05D005585 5.8e-53 212.6 393 34.4
PGR083G2529 Punica granatum HOM05D005129 ORTHO05D005585 1.3e-52 211.5 451 33.9
FvH4_3g10781 Fragaria vesca HOM05D005129 ORTHO05D005585 6.4e-52 209.1 391 38.6
Phvul.008G197100 Phaseolus vulgaris HOM05D005129 ORTHO05D005585 6.4e-52 209.1 399 34.8
arahy.Tifrunner.gnm1.ann1.40GDTE Arachis hypogaea HOM05D005129 ORTHO05D005585 1.1e-51 208.4 432 33.1
LjContig00049g0025087 Lotus japonicus HOM05D005129 ORTHO05D005585 9.3e-51 205.3 408 33.8
Lalb_Chr04g0249051 Lupinus albus HOM05D005129 ORTHO05D005585 9.3e-51 205.3 426 35.2
Oeu046929.1 Olea europaea HOM05D005129 ORTHO05D005585 9.3e-51 205.3 403 36.5
arahy.Tifrunner.gnm1.ann1.LUZ6WJ Arachis hypogaea HOM05D005129 ORTHO05D005585 1.6e-50 204.5 419 32.9
Ca_00871_v3 Cicer arietinum L. HOM05D005129 ORTHO05D005585 2.7e-50 203.8 416 34.4
VMungo0647G0154 Vigna mungo HOM05D005129 ORTHO05D005585 2.3e-49 200.7 397 34.5
Glyma.14G032500 Glycine max HOM05D005129 ORTHO05D005585 6.7e-49 199.1 413 33.2
Glyma.02G281900 Glycine max HOM05D005129 ORTHO05D005585 1.1e-48 198.4 413 33.2
Sed0027997 Sechium edule HOM05D005129 ORTHO05D005585 3.3e-48 196.8 432 32.9
Hund21086 Selenicereus undatus HOM05D005129 ORTHO05D005585 7.4e-48 195.7 392 31.9
Medtr2g031380 Medicago truncatula HOM05D005129 ORTHO05D005585 9.6e-48 195.3 393 35.4
EL10Ac3g05106 Beta vulgaris HOM05D005129 ORTHO05D005585 4.8e-47 193.0 387 33.1
MELO3C002837.2 Cucumis melo HOM05D005129 ORTHO05D005585 6.2e-47 192.6 443 33.0
TWI63G1468 Tripterygium wilfordii HOM05D005129 ORTHO05D005585 6.2e-47 192.6 413 33.4
ClCG03G008270 Citrullus lanatus HOM05D005129 ORTHO05D005585 4.0e-46 189.9 439 31.9
CsaV3_1G037120 Cucumis sativus L. HOM05D005129 ORTHO05D005585 5.3e-46 189.5 426 33.3
Solyc07g041330.3 Solanum lycopersicum HOM05D005129 ORTHO05D005585 9.0e-46 188.7 407 32.4
BcaC01g05762 Brassica carinata HOM05D005129 ORTHO05D005585 1.2e-45 188.3 386 33.9
Migut.M00948 Erythranthe guttata HOM05D005129 ORTHO05D005585 1.5e-45 188.0 382 34.3
Solyc02g022870.4 Solanum lycopersicum HOM05D005129 ORTHO05D005585 2.6e-45 187.2 397 33.0
Ah.13g071200 Amaranthus hybridus HOM05D005129 ORTHO05D005585 7.6e-45 185.7 383 31.9
Sp4g17070 Schrenkiella parvula HOM05D005129 ORTHO05D005585 1.3e-44 184.9 395 33.4
Sopen02g006450 Solanum pennellii HOM05D005129 ORTHO05D005585 1.7e-44 184.5 397 32.7
BolC4t27871H Brassica oleracea HOM05D005129 ORTHO05D005585 2.9e-44 183.7 393 33.3
SGA_v2.0_scaffold333G49012 Striga asiatica HOM05D005129 ORTHO05D005585 2.9e-44 183.7 355 35.8
Cc09_g07500 Coffea canephora HOM05D005129 ORTHO05D005585 4.9e-44 183.0 391 34.5
SalBow8G1057 Salvia bowleyana HOM05D005129 ORTHO05D005585 6.5e-44 182.6 359 34.0
Thhalv10016158m.g Eutrema salsugineum HOM05D005129 ORTHO05D005585 1.9e-43 181.0 390 33.6
TPR.G22269 Trifolium pratense HOM05D005129 ORTHO05D005585 3.2e-43 180.3 432 32.4
Sopen07g020720 Solanum pennellii HOM05D005129 ORTHO05D005585 4.2e-43 179.9 407 31.4
DCAR_003834 Daucus carota HOM05D005129 ORTHO05D005585 9.3e-43 178.7 432 31.2
Peaxi162Scf01909g00118 Petunia axillaris HOM05D005129 ORTHO05D005585 3.5e-42 176.8 418 31.6
BcaB02g09508 Brassica carinata HOM05D005129 ORTHO05D005585 2.3e-41 174.1 416 34.1
Nitab4.5_0002094g0030 Nicotiana tabacum HOM05D005129 ORTHO05D005585 2.3e-41 174.1 405 32.1
A05p10880 Brassica napus HOM05D005129 ORTHO05D005585 3.0e-41 173.7 396 34.1
CARHR128940 Cardamine hirsuta HOM05D005129 ORTHO05D005585 3.9e-41 173.3 412 32.5
Lsat_1_v5_gn_3_43520 Lactuca sativa HOM05D005129 ORTHO05D005585 8.7e-41 172.2 414 31.6
MELO3C033745.2 Cucumis melo HOM05D005129 ORTHO05D005585 1.1e-40 171.8 404 32.4
Nitab4.5_0000076g0130 Nicotiana tabacum HOM05D005129 ORTHO05D005585 1.9e-40 171.0 420 31.9
vmacro03361 Vaccinium macrocarpon HOM05D005129 ORTHO05D005585 2.5e-40 170.6 461 31.2
AT2G34780 Arabidopsis thaliana HOM05D005129 ORTHO05D005585 3.3e-40 170.2 403 33.5
C04p13980 Brassica napus HOM05D005129 ORTHO05D005585 4.3e-40 169.9 398 33.7
BolC4t22987H Brassica oleracea HOM05D005129 ORTHO05D005585 4.3e-40 169.9 398 33.7
THA.LOC104812690 Tarenaya hassleriana HOM05D005129 ORTHO05D005585 5.7e-40 169.5 424 32.1
BcaC02g11559 Brassica carinata HOM05D005129 ORTHO05D005585 7.4e-40 169.1 391 33.2
BcaB06g28799 Brassica carinata HOM05D005129 ORTHO05D005585 2.2e-39 167.5 397 32.5
BraA05t20033Z Brassica rapa HOM05D005129 ORTHO05D005585 4.8e-39 166.4 395 32.7
AL4G30770 Arabidopsis lyrata HOM05D005129 ORTHO05D005585 1.1e-38 165.2 401 31.9
Aa31LG10G6520 Aethionema arabicum HOM05D005129 ORTHO05D005585 5.3e-38 162.9 414 31.4
CAN.G39.32 Capsicum annuum HOM05D005129 ORTHO05D000007 2.6e-37 160.6 404 31.4
ECA246G0263 Erigeron canadensis HOM05D005129 ORTHO05D005585 1.0e-36 158.7 377 31.0
CiPaw.16G039600 Carya illinoinensis HOM05D005129 ORTHO05D005585 4.2e-35 153.3 439 31.2
C03p22490 Brassica napus HOM05D002581 ORTHO05D002828 4.6e-34 149.8 250 37.6
SGA_v2.0_scaffold1G00142 Striga asiatica HOM05D005129 ORTHO05D005585 7.9e-34 149.1 400 30.2
Carub.0004s1647 Capsella rubella HOM05D005129 ORTHO05D005585 1.0e-33 148.7 392 31.6
FAN25G0785 Fragaria x ananassa HOM05D005129 ORTHO05D005585 1.8e-33 147.9 394 31.0
HanXRQChr03g0080681 Helianthus annuus HOM05D005129 ORTHO05D005585 5.3e-30 136.3 394 27.2
Zm00001eb152060 Zea mays HOM05D005129 ORTHO05D005585 1.5e-29 134.8 369 30.1
unitig_748.g7646 Utricularia gibba HOM05D005129 ORTHO05D005585 2.0e-29 134.4 397 28.7
Os01g0768700 Oryza sativa ssp. japonica HOM05D005129 ORTHO05D005585 1.9e-27 127.9 284 31.3
HPP92_022552 Vanilla planifolia HOM05D005129 ORTHO05D005585 4.7e-26 123.2 324 29.3
SHI24815 Sapria himalayana HOM05D005129 ORTHO05D005585 6.1e-26 122.9 305 36.7
Ah.13g069630 Amaranthus hybridus HOM05D005129 ORTHO05D005585 2.4e-22 110.9 280 29.6
Aqoxy2G01761 Aquilegia oxysepala HOM05D000076 ORTHO05D005585 5.9e-21 106.3 93 62.4
Psat1g165880 Pisum sativum HOM05D005129 ORTHO05D005585 6.7e-17 92.8 207 35.3
A04p26560 Brassica napus HOM05D002581 ORTHO05D002828 5.9e-13 79.7 203 30.5
Dinv27171 Davidia involucrata HOM05D005129 ORTHO05D005585 1.7e-12 78.2 86 45.3
C04p63980 Brassica napus HOM05D002581 ORTHO05D002828 1.1e-11 75.5 200 30.5
BraA04t18160Z Brassica rapa HOM05D002581 ORTHO05D002828 1.1e-11 75.5 200 30.5
TPR.G8782 Trifolium pratense HOM05D000048 ORTHO05D004674 3.2e-11 73.9 194 28.4
Medtr5g090200 Medicago truncatula HOM05D005129 ORTHO05D005585 2.0e-08 64.7 192 27.1
Actinidia00605 Actinidia chinensis HOM05D005129 ORTHO05D005585 1.7e-07 61.6 70 44.3


User provided reference genes

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