Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00163 Aquilegia oxysepala HOM05D000497 ORTHO05D000020 2.0e-82 309.3 186 100.0
Cpa.g.sc3.43 Carica papaya HOM05D000497 ORTHO05D000020 7.8e-10 68.2 75 48.0
CSS0011138 Camellia sinensis var. sinensis HOM05D000497 ORTHO05D000020 1.3e-09 67.4 75 56.0
Aqoxy5G04110 Aquilegia oxysepala HOM05D000497 ORTHO05D000020 1.7e-09 67.0 93 46.2
Gohir.D09G178300 Gossypium hirsutum HOM05D000497 ORTHO05D000020 1.7e-09 67.0 58 63.8
Gorai.006G200400 Gossypium raimondii HOM05D000497 ORTHO05D000020 1.7e-09 67.0 58 63.8
Gohir.A09G183600 Gossypium hirsutum HOM05D000497 ORTHO05D000020 5.0e-09 65.5 59 62.7
Cfa016357 Carpinus fangiana HOM05D000497 ORTHO05D000020 1.1e-08 64.3 73 52.1
FAN01G0292 Fragaria x ananassa HOM05D000497 ORTHO05D000020 3.3e-08 62.8 81 50.6
TWI14G0798 Tripterygium wilfordii HOM05D000497 ORTHO05D000020 3.3e-08 62.8 73 54.8
FAN06G3373 Fragaria x ananassa HOM05D000497 ORTHO05D000020 4.3e-08 62.4 81 50.6
FAN06G4388 Fragaria x ananassa HOM05D000497 ORTHO05D000020 4.3e-08 62.4 81 50.6
FAN10G1872 Fragaria x ananassa HOM05D000497 ORTHO05D000020 4.3e-08 62.4 81 50.6
FvH4_7g30930 Fragaria vesca HOM05D000497 ORTHO05D000020 5.6e-08 62.0 68 55.9
TWI23G0159 Tripterygium wilfordii HOM05D000497 ORTHO05D000020 7.3e-08 61.6 73 53.4
COL.COLO4_35667 Corchorus olitorius HOM05D000497 ORTHO05D000020 9.5e-08 61.2 76 51.3
Thhalv10013898m.g Eutrema salsugineum HOM05D000497 ORTHO05D000020 9.5e-08 61.2 83 47.0
SGA_v2.0_scaffold44G16773 Striga asiatica HOM05D000497 ORTHO05D000020 9.5e-08 61.2 83 47.0
Haze_00105 Corylus avellana HOM05D000497 ORTHO05D000020 1.2e-07 60.8 69 50.7
RcHm_v2.0_Chr1g0380021 Rosa chinensis HOM05D000497 ORTHO05D000020 1.2e-07 60.8 81 48.1
Aa31LG3G9240 Aethionema arabicum HOM05D000497 ORTHO05D000020 1.6e-07 60.5 82 48.8
CANSAT21G0646 Cannabis sativa HOM05D000497 ORTHO05D000020 1.6e-07 60.5 68 50.0
CiPaw.06G007000 Carya illinoinensis HOM05D000497 ORTHO05D000020 1.6e-07 60.5 74 51.4
PGR142G3569 Punica granatum HOM05D000497 ORTHO05D000020 1.6e-07 60.5 67 52.2
FAN03G2089 Fragaria x ananassa HOM05D000497 ORTHO05D000020 2.1e-07 60.1 68 54.4
FAN10G1432 Fragaria x ananassa HOM05D000497 ORTHO05D000020 2.1e-07 60.1 81 49.4
A02p11160 Brassica napus HOM05D000497 ORTHO05D000020 2.8e-07 59.7 62 50.0
BraA02t06179Z Brassica rapa HOM05D000497 ORTHO05D000020 2.8e-07 59.7 62 50.0
MD07G1284200 Malus domestica HOM05D000497 ORTHO05D000020 2.8e-07 59.7 69 52.2
Manes.05G026200 Manihot esculenta HOM05D000497 ORTHO05D000020 3.6e-07 59.3 61 52.5
Sabra06G0113600 Salix brachista HOM05D000497 ORTHO05D000020 3.6e-07 59.3 65 49.2
SHI13142 Sapria himalayana HOM05D000497 ORTHO05D000020 3.6e-07 59.3 64 53.1
vmacro23246 Vaccinium macrocarpon HOM05D000497 ORTHO05D000020 3.6e-07 59.3 72 50.0
Duzib084G0902 Durio zibethinus HOM05D000497 ORTHO05D000020 4.7e-07 58.9 78 50.0
Nn7g37379 Nelumbo nucifera HOM05D000497 ORTHO05D000020 4.7e-07 58.9 82 50.0
Potri.002G167400 Populus trichocarpa HOM05D000497 ORTHO05D000020 4.7e-07 58.9 61 55.7
Sabra02G0144300 Salix brachista HOM05D000497 ORTHO05D000020 4.7e-07 58.9 61 54.1
CSS0014988 Camellia sinensis var. sinensis HOM05D000497 ORTHO05D000020 6.2e-07 58.5 75 49.3
CARHR235640 Cardamine hirsuta HOM05D000497 ORTHO05D000020 6.2e-07 58.5 81 46.9
Gohir.D12G253300 Gossypium hirsutum HOM05D000497 ORTHO05D000020 6.2e-07 58.5 83 47.0
Potri.014G094500 Populus trichocarpa HOM05D000497 ORTHO05D000020 6.2e-07 58.5 70 47.1
A10p10810 Brassica napus HOM05D000497 ORTHO05D000020 8.0e-07 58.2 78 44.9
BraA10t43165Z Brassica rapa HOM05D000497 ORTHO05D000020 8.0e-07 58.2 78 44.9
Gohir.A11G094500 Gossypium hirsutum HOM05D000497 ORTHO05D000020 8.0e-07 58.2 80 47.5
Gohir.A12G252200 Gossypium hirsutum HOM05D000497 ORTHO05D000020 8.0e-07 58.2 83 45.8
Gohir.D11G099500 Gossypium hirsutum HOM05D000497 ORTHO05D000020 8.0e-07 58.2 80 47.5
Gorai.007G105700 Gossypium raimondii HOM05D000497 ORTHO05D000020 8.0e-07 58.2 80 47.5
Gorai.008G271200 Gossypium raimondii HOM05D000497 ORTHO05D000020 8.0e-07 58.2 83 45.8
MD01G1214500 Malus domestica HOM05D000497 ORTHO05D000020 8.0e-07 58.2 70 51.4
Manes.06G156400 Manihot esculenta HOM05D000497 ORTHO05D000020 8.0e-07 58.2 75 50.7
Sabra14G0069100 Salix brachista HOM05D000497 ORTHO05D000020 8.0e-07 58.2 65 49.2
Sp6g15440 Schrenkiella parvula HOM05D000497 ORTHO05D000020 8.0e-07 58.2 83 45.8
AT4G27950 Arabidopsis thaliana HOM05D000497 ORTHO05D000020 1.1e-06 57.8 81 45.7
CSS0041141 Camellia sinensis var. sinensis HOM05D000497 ORTHO05D000020 1.1e-06 57.8 78 46.2
CAN.G108.20 Capsicum annuum HOM05D000497 ORTHO05D000020 1.1e-06 57.8 77 48.1
arahy.Tifrunner.gnm1.ann1.Q66BD2 Arachis hypogaea HOM05D000497 ORTHO05D000020 1.4e-06 57.4 68 52.9
Manes.01G249600 Manihot esculenta HOM05D000497 ORTHO05D000020 1.4e-06 57.4 66 47.0
Atru.chr5.618 Acer truncatum HOM05D000497 ORTHO05D000020 1.8e-06 57.0 75 50.7
Aqoxy7G00164 Aquilegia oxysepala HOM05D000497 ORTHO05D000020 1.8e-06 57.0 73 56.2
AL7G24690 Arabidopsis lyrata HOM05D000497 ORTHO05D000020 1.8e-06 57.0 73 49.3
Ca_16671_v3 Cicer arietinum L. HOM05D000497 ORTHO05D000020 1.8e-06 57.0 66 54.5
Duzib138G1366 Durio zibethinus HOM05D000497 ORTHO05D000020 1.8e-06 57.0 74 50.0
Nitab4.5_0005888g0010 Nicotiana tabacum HOM05D000497 ORTHO05D000020 1.8e-06 57.0 86 46.5
Thecc.01G347800 Theobroma cacao HOM05D000497 ORTHO05D000020 1.8e-06 57.0 74 50.0
SGA_v2.0_scaffold192G40586 Striga asiatica HOM05D000497 ORTHO05D000020 2.3e-06 56.6 82 46.3
MBI07_g20441_MAGBIO Magnolia biondii HOM05D000497 ORTHO05D000020 3.1e-06 56.2 88 43.2
Oeu036890.1 Olea europaea HOM05D000497 ORTHO05D000020 3.1e-06 56.2 80 42.5
BcaC01g06239 Brassica carinata HOM05D000497 ORTHO05D000020 4.0e-06 55.8 65 52.3
C03p17780 Brassica napus HOM05D000497 ORTHO05D000020 4.0e-06 55.8 65 52.3
BolC3t14185H Brassica oleracea HOM05D000497 ORTHO05D000020 4.0e-06 55.8 65 52.3
MELO3C006973.2 Cucumis melo HOM05D000497 ORTHO05D000020 4.0e-06 55.8 70 51.4
CsaV3_3G021840 Cucumis sativus L. HOM05D000497 ORTHO05D000020 4.0e-06 55.8 70 51.4
DCAR_010628 Daucus carota HOM05D000497 ORTHO05D000020 4.0e-06 55.8 66 51.5
Nitab4.5_0000472g0020 Nicotiana tabacum HOM05D000497 ORTHO05D000020 4.0e-06 55.8 86 45.3
Thecc.03G192000 Theobroma cacao HOM05D000497 ORTHO05D000020 4.0e-06 55.8 78 48.7
Atru.chr1.280 Acer truncatum HOM05D000497 ORTHO05D000020 5.2e-06 55.5 69 52.2
Actinidia08622 Actinidia chinensis HOM05D000497 ORTHO05D000020 5.2e-06 55.5 78 47.4
Eucgr.D02344 Eucalyptus grandis HOM05D000497 ORTHO05D000020 5.2e-06 55.5 71 46.5
HanXRQChr14g0462771 Helianthus annuus HOM05D000497 ORTHO05D000020 5.2e-06 55.5 78 44.9
Solyc03g007460.3 Solanum lycopersicum HOM05D000497 ORTHO05D000020 5.2e-06 55.5 93 43.0
Sopen03g003410 Solanum pennellii HOM05D000497 ORTHO05D000020 5.2e-06 55.5 93 43.0
Ah.07g206070 Amaranthus hybridus HOM05D000497 ORTHO05D000020 6.8e-06 55.1 67 46.3
MSTRG.8681 Avicennia marina HOM05D000497 ORTHO05D000020 6.8e-06 55.1 73 46.6
BcaC09g50524 Brassica carinata HOM05D000497 ORTHO05D000020 6.8e-06 55.1 80 46.2
C01p24410 Brassica napus HOM05D000497 ORTHO05D000020 6.8e-06 55.1 80 46.2
BolC1t02387H Brassica oleracea HOM05D000497 ORTHO05D000020 6.8e-06 55.1 80 46.2
AUR62019798 Chenopodium quinoa HOM05D000497 ORTHO05D000020 6.8e-06 55.1 71 46.5
ClCG05G008650 Citrullus lanatus HOM05D000497 ORTHO05D000020 6.8e-06 55.1 70 51.4
Ciclev10005220m.g Citrus clementina HOM05D000497 ORTHO05D000020 6.8e-06 55.1 67 52.2
Peaxi162Scf00904g00035 Petunia axillaris HOM05D000497 ORTHO05D000020 6.8e-06 55.1 70 51.4
PGSC0003DMG400036493 Solanum tuberosum HOM05D000497 ORTHO05D000020 6.8e-06 55.1 85 45.9
AT5G53290 Arabidopsis thaliana HOM05D000497 ORTHO05D000020 8.9e-06 54.7 80 47.5
BcaNung01607 Brassica carinata HOM05D000497 ORTHO05D000020 8.9e-06 54.7 77 46.8
A03p15220 Brassica napus HOM05D000497 ORTHO05D000020 8.9e-06 54.7 65 50.8
BraA03t10815Z Brassica rapa HOM05D000497 ORTHO05D000020 8.9e-06 54.7 65 50.8
CARHR266330 Cardamine hirsuta HOM05D000497 ORTHO05D000020 8.9e-06 54.7 83 45.8
CDE10G0870 Ceratophyllum demersum HOM05D000497 ORTHO05D000020 8.9e-06 54.7 71 45.1
Rhsim03G0198200 Rhododendron simsii HOM05D000497 ORTHO05D000020 8.9e-06 54.7 66 48.5
vmacro10102 Vaccinium macrocarpon HOM05D000497 ORTHO05D000020 8.9e-06 54.7 65 49.2
vmacro11449 Vaccinium macrocarpon HOM05D000497 ORTHO05D000020 8.9e-06 54.7 48 56.2


User provided reference genes

Program Settings