Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00012 Aquilegia oxysepala HOM05D007943 ORTHO05D010047 1.4e-67 259.6 139 100.0
CSS0046577 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 2.5e-13 79.3 90 42.2
Duzib133G1419 Durio zibethinus HOM05D007943 ORTHO05D010047 2.5e-13 79.3 61 55.7
CSS0001750 Camellia sinensis var. sinensis HOM05D007943 ORTHO05D010047 5.6e-13 78.2 61 52.5
Oeu042966.1 Olea europaea HOM05D007943 ORTHO05D010047 5.6e-13 78.2 92 44.6
Nn3g18838 Nelumbo nucifera HOM05D007943 ORTHO05D010047 9.6e-13 77.4 57 61.4
Prupe.2G195800 Prunus persica HOM05D007943 ORTHO05D010047 9.6e-13 77.4 59 54.2
RcHm_v2.0_Chr1g0360861 Rosa chinensis HOM05D007943 ORTHO05D010047 9.6e-13 77.4 107 38.3
MD01G1087200 Malus domestica HOM05D007943 ORTHO05D010047 2.1e-12 76.3 59 55.9
FAN10G1708 Fragaria x ananassa HOM05D007943 ORTHO05D010047 2.8e-12 75.9 77 45.5
Sabra02G0135900 Salix brachista HOM05D007943 ORTHO05D010047 2.8e-12 75.9 67 49.3
FAN01G2944 Fragaria x ananassa HOM05D007943 ORTHO05D010047 3.6e-12 75.5 77 44.2
FAN03G2903 Fragaria x ananassa HOM05D007943 ORTHO05D010047 3.6e-12 75.5 60 51.7
FAN10G0207 Fragaria x ananassa HOM05D007943 ORTHO05D010047 3.6e-12 75.5 77 44.2
FvH4_7g17420 Fragaria vesca HOM05D007943 ORTHO05D010047 6.2e-12 74.7 60 51.7
FAN06G1823 Fragaria x ananassa HOM05D007943 ORTHO05D010047 6.2e-12 74.7 60 51.7
TAR629G3284 Trochodendron aralioides HOM05D007943 ORTHO05D010047 1.1e-11 73.9 59 55.9
COL.COLO4_06217 Corchorus olitorius HOM05D007943 ORTHO05D010047 1.8e-11 73.2 52 59.6
MD07G1157400 Malus domestica HOM05D007943 ORTHO05D010047 1.8e-11 73.2 59 50.8
Potri.014G104100 Populus trichocarpa HOM05D007943 ORTHO05D010047 1.8e-11 73.2 68 45.6
Potri.002G177700 Populus trichocarpa HOM05D007943 ORTHO05D010047 2.4e-11 72.8 67 46.3
Thecc.01G335100 Theobroma cacao HOM05D007943 ORTHO05D010047 2.4e-11 72.8 59 52.5
Gohir.A11G100000 Gossypium hirsutum HOM05D007943 ORTHO05D010047 3.1e-11 72.4 52 59.6
Gohir.D11G104700 Gossypium hirsutum HOM05D007943 ORTHO05D010047 3.1e-11 72.4 52 59.6
Gorai.007G112000 Gossypium raimondii HOM05D007943 ORTHO05D010047 3.1e-11 72.4 52 59.6
Hund16743 Selenicereus undatus HOM05D007943 ORTHO05D010047 5.3e-11 71.6 73 45.2
Manes.05G017800 Manihot esculenta HOM05D007943 ORTHO05D010047 1.2e-10 70.5 113 36.3
Manes.01G241300 Manihot esculenta HOM05D007943 ORTHO05D010047 1.5e-10 70.1 87 40.2
Gohir.D07G139100 Gossypium hirsutum HOM05D007943 ORTHO05D010047 4.4e-10 68.6 52 53.8
Gorai.001G151200 Gossypium raimondii HOM05D007943 ORTHO05D010047 4.4e-10 68.6 52 53.8
QL08p046777 Quercus lobata HOM05D007943 ORTHO05D010047 5.8e-10 68.2 72 47.2
TAR375G0647 Trochodendron aralioides HOM05D007943 ORTHO05D010047 5.8e-10 68.2 52 53.8
Ciclev10022962m.g Citrus clementina HOM05D007943 ORTHO05D010047 7.6e-10 67.8 61 49.2
Cfa003750 Carpinus fangiana HOM05D007943 ORTHO05D010047 1.7e-09 66.6 49 55.1
Gohir.A07G134500 Gossypium hirsutum HOM05D007943 ORTHO05D010047 2.2e-09 66.2 52 51.9
CiPaw.01G081100 Carya illinoinensis HOM05D007943 ORTHO05D010047 3.8e-09 65.5 49 57.1
Medtr8g024630 Medicago truncatula HOM05D007943 ORTHO05D010047 3.8e-09 65.5 68 44.1
Haze_15717 Corylus avellana HOM05D007943 ORTHO05D010047 4.9e-09 65.1 49 57.1
Glyma.16G020300 Glycine max HOM05D007943 ORTHO05D010047 6.4e-09 64.7 64 45.3
Glyma.07G051200 Glycine max HOM05D007943 ORTHO05D010047 8.4e-09 64.3 64 43.8
TPR.G25267 Trifolium pratense HOM05D007943 ORTHO05D010047 1.1e-08 63.9 60 48.3
GSVIVG01027420001 Vitis vinifera HOM05D007943 ORTHO05D010047 1.1e-08 63.9 60 46.7
Atru.chr5.749 Acer truncatum HOM05D007943 ORTHO05D010047 1.4e-08 63.5 67 40.3
Zm00001eb073340 Zea mays HOM05D007943 ORTHO05D010047 1.4e-08 63.5 61 44.3
HPP92_015077 Vanilla planifolia HOM05D000968 ORTHO05D001687 1.9e-08 63.2 46 56.5
Lalb_Chr10g0100821 Lupinus albus HOM05D007943 ORTHO05D010047 2.4e-08 62.8 49 55.1
Psat4g217240 Pisum sativum HOM05D007943 ORTHO05D010047 2.4e-08 62.8 49 49.0
DCAR_006654 Daucus carota HOM05D007943 ORTHO05D010047 7.1e-08 61.2 44 52.3
Os03g0126900 Oryza sativa ssp. japonica HOM05D007943 ORTHO05D010047 9.3e-08 60.8 62 41.9
Os04g0577375 Oryza sativa ssp. japonica HOM05D007943 ORTHO05D010047 9.3e-08 60.8 51 51.0
Phvul.006G116500 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 1.2e-07 60.5 91 35.2
Sc23g0001870 Simmondsia chinensis HOM05D007943 ORTHO05D010047 1.2e-07 60.5 89 38.2
Os03g0315200 Oryza sativa ssp. japonica HOM05D007943 ORTHO05D010047 1.6e-07 60.1 48 52.1
AUR62004549 Chenopodium quinoa HOM05D007943 ORTHO05D010047 2.1e-07 59.7 47 51.1
Solyc10g009260.1 Solanum lycopersicum HOM05D007943 ORTHO05D010047 2.1e-07 59.7 64 42.2
Lj3g0013373 Lotus japonicus HOM05D007943 ORTHO05D010047 3.5e-07 58.9 75 41.3
TPR.G4732 Trifolium pratense HOM05D007943 ORTHO05D010047 3.5e-07 58.9 70 42.9
CsaV3_3G007710 Cucumis sativus L. HOM05D007943 ORTHO05D010047 4.6e-07 58.5 58 46.6
Glyma.19G259000 Glycine max HOM05D007943 ORTHO05D010047 4.6e-07 58.5 68 38.2
Lalb_Chr02g0157681 Lupinus albus HOM05D007943 ORTHO05D010047 1.7e-06 56.6 48 45.8
Rhsim01G0178600 Rhododendron simsii HOM05D007943 ORTHO05D010047 1.7e-06 56.6 62 41.9
HPP92_022240 Vanilla planifolia HOM05D007943 ORTHO05D010047 3.0e-06 55.8 54 44.4
Phvul.010G118200 Phaseolus vulgaris HOM05D007943 ORTHO05D010047 5.1e-06 55.1 50 48.0
ATR0579G097 Amborella trichopoda HOM05D007943 ORTHO05D010047 8.7e-06 54.3 51 43.1


User provided reference genes

Program Settings