Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy72s001 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 1.9e-88 329.3 187 100.0
Aqoxy1G01418 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 1.5e-85 319.7 171 99.4
Aqoxy2G00467 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 2.5e-77 292.4 171 92.4
Aqoxy7G03169 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 9.7e-77 290.4 171 90.1
Aqoxy7G03168 Aquilegia oxysepala HOM05D004872 ORTHO05D006050 1.6e-34 150.2 125 66.4
Dinv22205 Davidia involucrata HOM05D004872 ORTHO05D006050 1.3e-33 147.1 166 53.0
TAR633G0253 Trochodendron aralioides HOM05D004872 ORTHO05D006050 1.7e-33 146.7 165 55.2
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 2.3e-33 146.4 150 57.3
MSTRG.1742 Avicennia marina HOM05D004872 ORTHO05D006050 8.6e-33 144.4 170 53.5
QL01p016491 Quercus lobata HOM05D004872 ORTHO05D006050 8.6e-33 144.4 145 55.9
QL01p024148 Quercus lobata HOM05D004872 ORTHO05D006050 8.6e-33 144.4 145 55.9
SalBow6G3136 Salvia bowleyana HOM05D004872 ORTHO05D006050 8.6e-33 144.4 159 55.3
Cpa.g.sc34.184 Carica papaya HOM05D004872 ORTHO05D006050 1.9e-32 143.3 164 51.2
GSVIVG01037356001 Vitis vinifera HOM05D004872 ORTHO05D006050 1.9e-32 143.3 141 57.4
Duzib150G1163 Durio zibethinus HOM05D004872 ORTHO05D006050 2.5e-32 142.9 164 51.2
RcHm_v2.0_Chr5g0046151 Rosa chinensis HOM05D004872 ORTHO05D006050 4.3e-32 142.1 140 56.4
FAN25G2824 Fragaria x ananassa HOM05D004872 ORTHO05D006050 7.3e-32 141.4 142 56.3
Thecc.09G254600 Theobroma cacao HOM05D004872 ORTHO05D006050 7.3e-32 141.4 164 50.0
FvH4_3g25170 Fragaria vesca HOM05D004872 ORTHO05D006050 9.5e-32 141.0 142 56.3
Atru.chr4.2930 Acer truncatum HOM05D004872 ORTHO05D006050 1.2e-31 140.6 171 49.1
Rhsim07G0167900 Rhododendron simsii HOM05D004872 ORTHO05D006050 1.6e-31 140.2 166 47.0
CiPaw.14G110500 Carya illinoinensis HOM05D004872 ORTHO05D006050 2.8e-31 139.4 120 60.8
Manes.09G068000 Manihot esculenta HOM05D004872 ORTHO05D006050 2.8e-31 139.4 162 51.2
Eucgr.J02277 Eucalyptus grandis HOM05D004872 ORTHO05D006050 3.6e-31 139.0 145 57.9
Potri.013G075500 Populus trichocarpa HOM05D004872 ORTHO05D006050 3.6e-31 139.0 143 53.1
Hma1.2p1_0299F.1_g117840 Hydrangea macrophylla HOM05D004872 ORTHO05D006050 4.7e-31 138.7 169 50.3
MD12G1010900 Malus domestica HOM05D004872 ORTHO05D006050 6.2e-31 138.3 146 53.4
Peaxi162Scf00025g02826 Petunia axillaris HOM05D004872 ORTHO05D006050 6.2e-31 138.3 144 54.2
Ciclev10006059m.g Citrus clementina HOM05D004872 ORTHO05D006050 8.0e-31 137.9 131 58.8
SGA_v2.0_scaffold144G35815 Striga asiatica HOM05D004872 ORTHO05D006050 8.0e-31 137.9 145 55.2
Sabra13G0065000 Salix brachista HOM05D004872 ORTHO05D006050 1.0e-30 137.5 178 48.3
Cc11_g04500 Coffea canephora HOM05D004872 ORTHO05D006050 2.3e-30 136.3 140 55.7
Cfa009914 Carpinus fangiana HOM05D004872 ORTHO05D006050 4.0e-30 135.6 119 61.3
CSS0006428 Camellia sinensis var. sinensis HOM05D004872 ORTHO05D006050 5.2e-30 135.2 174 47.7
PGSC0003DMG400003977 Solanum tuberosum HOM05D004872 ORTHO05D006050 1.2e-29 134.0 150 52.7
arahy.Tifrunner.gnm1.ann1.EX2XSN Arachis hypogaea HOM05D004872 ORTHO05D006050 2.0e-29 133.3 169 47.3
CANSAT54G2026 Cannabis sativa HOM05D004872 ORTHO05D006050 2.0e-29 133.3 156 51.9
CAN.G1549.27 Capsicum annuum HOM05D004872 ORTHO05D006050 2.0e-29 133.3 155 51.0
Lsat_1_v5_gn_8_24740 Lactuca sativa HOM05D004872 ORTHO05D006050 2.6e-29 132.9 160 51.2
ECA233G5422 Erigeron canadensis HOM05D004872 ORTHO05D006050 3.4e-29 132.5 153 47.7
Lsat_1_v5_gn_3_110040 Lactuca sativa HOM05D004872 ORTHO05D006050 7.5e-29 131.3 172 45.9
arahy.Tifrunner.gnm1.ann1.U00P2R Arachis hypogaea HOM05D004872 ORTHO05D006050 1.3e-28 130.6 169 46.2
Haze_23271 Corylus avellana HOM05D004500 ORTHO05D005775 1.3e-28 130.6 146 54.1
Sc11g0003110 Simmondsia chinensis HOM05D004872 ORTHO05D006050 1.3e-28 130.6 166 50.6
COL.COLO4_24934 Corchorus olitorius HOM05D004872 ORTHO05D006050 1.7e-28 130.2 130 53.8
Nn8g39701 Nelumbo nucifera HOM05D004872 ORTHO05D006050 1.7e-28 130.2 175 48.6
Gohir.A09G108400 Gossypium hirsutum HOM05D004872 ORTHO05D006050 2.2e-28 129.8 160 48.1
FAN11G3172 Fragaria x ananassa HOM05D004872 ORTHO05D006050 2.9e-28 129.4 100 68.0
Glyma.01G027700 Glycine max HOM05D004872 ORTHO05D006050 4.9e-28 128.6 149 48.3
HanXRQChr08g0217181 Helianthus annuus HOM05D004872 ORTHO05D006050 4.9e-28 128.6 159 47.8
Prupe.7G012800 Prunus persica HOM05D004872 ORTHO05D006050 4.9e-28 128.6 152 48.0
Nn2g15815 Nelumbo nucifera HOM05D004872 ORTHO05D006050 6.4e-28 128.3 167 49.1
CiPaw.13G148000 Carya illinoinensis HOM05D004872 ORTHO05D006050 8.3e-28 127.9 145 53.1
Gohir.D09G105300 Gossypium hirsutum HOM05D004872 ORTHO05D006050 1.1e-27 127.5 143 50.3
HanXRQChr10g0315331 Helianthus annuus HOM05D004872 ORTHO05D006050 1.1e-27 127.5 160 47.5
Actinidia06989 Actinidia chinensis HOM05D004500 ORTHO05D005775 3.2e-27 125.9 113 57.5
Glyma.08G136100 Glycine max HOM05D004872 ORTHO05D006050 4.1e-27 125.6 169 45.0
Lj6g0009628 Lotus japonicus HOM05D004872 ORTHO05D006050 5.4e-27 125.2 171 44.4
Lj6g0013181 Lotus japonicus HOM05D004872 ORTHO05D006050 5.4e-27 125.2 171 44.4
DCAR_030961 Daucus carota HOM05D004872 ORTHO05D006050 7.0e-27 124.8 171 48.5
Nitab4.5_0002138g0010 Nicotiana tabacum HOM05D004872 ORTHO05D006050 7.0e-27 124.8 138 52.2
THA.LOC104816943 Tarenaya hassleriana HOM05D004872 ORTHO05D006050 9.2e-27 124.4 131 51.1
PSO017G2452 Papaver somniferum HOM05D004872 ORTHO05D006050 1.2e-26 124.0 137 53.3
PSO017G5814 Papaver somniferum HOM05D004872 ORTHO05D006050 1.2e-26 124.0 137 53.3
PSO529G0002 Papaver somniferum HOM05D004872 ORTHO05D006050 1.2e-26 124.0 137 53.3
PSO591G0356 Papaver somniferum HOM05D004872 ORTHO05D006050 1.2e-26 124.0 137 53.3
PSO705G0001 Papaver somniferum HOM05D004872 ORTHO05D006050 1.2e-26 124.0 137 53.3
Prupe.4G268800 Prunus persica HOM05D004872 ORTHO05D006050 1.2e-26 124.0 178 42.7
TPR.G29301 Trifolium pratense HOM05D004872 ORTHO05D006050 1.6e-26 123.6 148 48.0
PSO591G0248 Papaver somniferum HOM05D004872 ORTHO05D006050 2.0e-26 123.2 137 53.3
AL4G43900 Arabidopsis lyrata HOM05D004872 ORTHO05D006050 3.5e-26 122.5 128 52.3
AUR62000220 Chenopodium quinoa HOM05D004872 ORTHO05D006050 3.5e-26 122.5 135 51.1
PSO541G2017 Papaver somniferum HOM05D004872 ORTHO05D006050 4.6e-26 122.1 137 52.6
Aa31LG1G26360 Aethionema arabicum HOM05D004872 ORTHO05D006050 7.8e-26 121.3 149 47.7
Gorai.006G122300 Gossypium raimondii HOM05D004872 ORTHO05D006050 7.8e-26 121.3 144 49.3
MBI17_g09534_MAGBIO Magnolia biondii HOM05D004872 ORTHO05D006050 1.3e-25 120.6 160 46.9
arahy.Tifrunner.gnm1.ann1.K1U5S9 Arachis hypogaea HOM05D004872 ORTHO05D006050 3.0e-25 119.4 195 40.5
TPR.G26917 Trifolium pratense HOM05D004872 ORTHO05D006050 3.0e-25 119.4 144 47.9
Thhalv10019047m.g Eutrema salsugineum HOM05D004872 ORTHO05D006050 3.9e-25 119.0 165 43.6
Psat2g130480 Pisum sativum HOM05D004872 ORTHO05D006050 3.9e-25 119.0 150 46.0
VMungo0251G0214 Vigna mungo HOM05D004872 ORTHO05D006050 3.9e-25 119.0 176 42.0
CDE05G2894 Ceratophyllum demersum HOM05D004872 ORTHO05D006050 6.6e-25 118.2 143 49.7
Medtr7g096840 Medicago truncatula HOM05D004872 ORTHO05D006050 8.6e-25 117.9 169 43.8
Migut.E01400 Erythranthe guttata HOM05D004872 ORTHO05D006050 1.1e-24 117.5 132 51.5
Hund07423 Selenicereus undatus HOM05D004872 ORTHO05D006050 1.1e-24 117.5 122 51.6
TWI31G0308 Tripterygium wilfordii HOM05D004872 ORTHO05D006050 1.5e-24 117.1 169 46.7
Lalb_Chr04g0249071 Lupinus albus HOM05D004872 ORTHO05D006050 2.5e-24 116.3 167 45.5
Solyc11g005570.2 Solanum lycopersicum HOM05D004872 ORTHO05D006050 3.3e-24 115.9 150 47.3
Sopen11g001540 Solanum pennellii HOM05D004872 ORTHO05D006050 3.3e-24 115.9 150 47.3
AT2G44820 Arabidopsis thaliana HOM05D004872 ORTHO05D006050 5.6e-24 115.2 179 43.0
arahy.Tifrunner.gnm1.ann1.R4J47E Arachis hypogaea HOM05D004872 ORTHO05D006050 5.6e-24 115.2 165 46.1
ClCG02G022680 Citrullus lanatus HOM05D004872 ORTHO05D006050 5.6e-24 115.2 135 50.4
MELO3C014544.2 Cucumis melo HOM05D004872 ORTHO05D006050 5.6e-24 115.2 148 47.3
ECA236G0590 Erigeron canadensis HOM05D004872 ORTHO05D006050 5.6e-24 115.2 117 56.4
Phvul.002G255800 Phaseolus vulgaris HOM05D004872 ORTHO05D006050 5.6e-24 115.2 171 42.1
CARHR140030 Cardamine hirsuta HOM05D004872 ORTHO05D006050 7.3e-24 114.8 151 45.7
CsaV3_6G038800 Cucumis sativus L. HOM05D004872 ORTHO05D006050 9.5e-24 114.4 148 47.3
Os01g0224500 Oryza sativa ssp. japonica HOM05D004872 ORTHO05D006050 9.5e-24 114.4 151 46.4
AUR62006565 Chenopodium quinoa HOM05D004872 ORTHO05D006050 1.2e-23 114.0 143 47.6
Sp4g26910 Schrenkiella parvula HOM05D004872 ORTHO05D006050 1.6e-23 113.6 127 50.4
Carub.0004s2739 Capsella rubella HOM05D004872 ORTHO05D006050 2.8e-23 112.8 143 46.2
Ah.04g159640 Amaranthus hybridus HOM05D004872 ORTHO05D006050 3.6e-23 112.5 167 43.1
BcaB02g10512 Brassica carinata HOM05D004872 ORTHO05D006050 8.1e-23 111.3 171 41.5
HPP92_015870 Vanilla planifolia HOM05D004872 ORTHO05D006050 1.8e-22 110.2 136 49.3
EL10Ac4g10086 Beta vulgaris HOM05D004872 ORTHO05D006050 2.3e-22 109.8 143 47.6
Nitab4.5_0001582g0110 Nicotiana tabacum HOM05D004872 ORTHO05D006050 2.3e-22 109.8 124 52.4
BolC4t22211H Brassica oleracea HOM05D004872 ORTHO05D006050 3.1e-22 109.4 156 44.9
BolC4t23202H Brassica oleracea HOM05D004872 ORTHO05D006050 3.1e-22 109.4 151 44.4
A05p12650 Brassica napus HOM05D004872 ORTHO05D006050 4.0e-22 109.0 152 43.4
Oeu040527.1 Olea europaea HOM05D004872 ORTHO05D006050 4.0e-22 109.0 128 52.3
BraA05t20203Z Brassica rapa HOM05D004872 ORTHO05D006050 5.2e-22 108.6 152 43.4
Manes.08G069866 Manihot esculenta HOM05D004872 ORTHO05D006050 5.2e-22 108.6 147 44.9
Oeu026038.1 Olea europaea HOM05D004872 ORTHO05D006050 5.2e-22 108.6 128 51.6
Aa31LG9G10050 Aethionema arabicum HOM05D004872 ORTHO05D006050 8.9e-22 107.8 155 46.5
A05p04990 Brassica napus HOM05D004872 ORTHO05D006050 8.9e-22 107.8 153 43.8
Sed0007255 Sechium edule HOM05D004872 ORTHO05D006050 2.0e-21 106.7 160 43.8
BcaB02g08868 Brassica carinata HOM05D004872 ORTHO05D006050 2.6e-21 106.3 142 47.9
BcaC02g12267 Brassica carinata HOM05D004872 ORTHO05D006050 4.4e-21 105.5 130 48.5
C04p05820 Brassica napus HOM05D004872 ORTHO05D006050 4.4e-21 105.5 130 48.5
BraA05t19473Z Brassica rapa HOM05D004872 ORTHO05D006050 2.2e-20 103.2 130 47.7
vmacro05825 Vaccinium macrocarpon HOM05D004872 ORTHO05D006050 2.2e-20 103.2 160 41.2
Sp2g10980 Schrenkiella parvula HOM05D004872 ORTHO05D006050 2.4e-19 99.8 144 45.1
AL7G43510 Arabidopsis lyrata HOM05D004872 ORTHO05D006050 9.2e-19 97.8 143 42.7
Zm00001eb192850 Zea mays HOM05D004872 ORTHO05D006050 1.0e-17 94.4 159 39.0
CiPaw.13G148200 Carya illinoinensis HOM05D004872 ORTHO05D006050 1.9e-16 90.1 135 45.9
arahy.Tifrunner.gnm1.ann1.X2Q8UN Arachis hypogaea HOM05D004872 ORTHO05D006050 3.3e-16 89.4 106 46.2
ATR0665G028 Amborella trichopoda HOM05D004872 ORTHO05D006050 8.1e-15 84.7 133 39.1
Sc11g0003120 Simmondsia chinensis HOM05D004872 ORTHO05D006050 6.8e-14 81.6 104 51.9
BcaC02g11364 Brassica carinata HOM05D004872 ORTHO05D006050 1.2e-13 80.9 130 42.3
Zm00001eb281550 Zea mays HOM05D004872 ORTHO05D006050 1.3e-12 77.4 122 41.0
AagrBONN_evm.TU.Sc2ySwM_362.236 Anthoceros agrestis HOM05D004872 ORTHO05D006050 1.9e-11 73.6 117 37.6
Mapoly0036s0026 Marchantia polymorpha HOM05D004872 ORTHO05D006050 4.1e-11 72.4 150 33.3
SEGI_13451 Sequoiadendron giganteum HOM05D004872 ORTHO05D006050 5.4e-11 72.0 127 37.0
PGR102G1802 Punica granatum HOM05D004872 ORTHO05D006050 2.1e-10 70.1 170 30.0
Pp3c23_7100 Physcomitrium patens HOM05D004872 ORTHO05D006050 1.7e-09 67.0 139 33.1
HanXRQChr17g0569331 Helianthus annuus HOM05D004872 ORTHO05D006050 3.9e-09 65.9 71 47.9
Zm00001eb416880 Zea mays HOM05D004872 ORTHO05D006050 2.1e-07 60.1 106 36.8
Duzib170G0487 Durio zibethinus HOM05D004872 ORTHO05D006050 4.7e-07 58.9 39 64.1
Ca_21429_v3 Cicer arietinum L. HOM05D004872 ORTHO05D006050 6.2e-07 58.5 56 51.8
TPR.G14060 Trifolium pratense HOM05D004872 ORTHO05D006050 4.0e-06 55.8 113 40.7


User provided reference genes

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